RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.37
LSM7-205ENST00000589532 RPL37P61927 97 aaKnown RBP12.68□□□□□ -0.38
LSM7-205ENST00000589532 LORP23490 312 aaPredicted RBP12.67□□□□□ -0.38
LSM7-205ENST00000589532 SIGMAR1Q99720 223 aa12.64□□□□□ -0.39
LSM7-205ENST00000589532 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
LSM7-205ENST00000589532 KRTAP10-6P60371 365 aaPredicted RBP12.62□□□□□ -0.39
LSM7-205ENST00000589532 Q96NJ1 140 aa12.62□□□□□ -0.39
LSM7-205ENST00000589532 LINC00472Q9H8W2 130 aa12.59□□□□□ -0.39
LSM7-205ENST00000589532 J3KT08 172 aa12.58□□□□□ -0.4
LSM7-205ENST00000589532 PRO0461Q9UI25 63 aa12.58□□□□□ -0.4
LSM7-205ENST00000589532 F8W1H4 67 aa12.57□□□□□ -0.4
LSM7-205ENST00000589532 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
LSM7-205ENST00000589532 NREPQ16612 68 aa12.51□□□□□ -0.41
LSM7-205ENST00000589532 DEFB116Q30KQ4 102 aa12.51□□□□□ -0.41
LSM7-205ENST00000589532 NDUFB1O75438 58 aa12.48□□□□□ -0.41
LSM7-205ENST00000589532 LINC00313P59037 77 aa12.46□□□□□ -0.41
LSM7-205ENST00000589532 C8orf87E5RJ46 101 aa12.44□□□□□ -0.42
LSM7-205ENST00000589532 COX6B2Q6YFQ2 88 aa12.44□□□□□ -0.42
LSM7-205ENST00000589532 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
LSM7-205ENST00000589532 A0A1B0GVX0 72 aa12.43□□□□□ -0.42
LSM7-205ENST00000589532 M0R2T5 61 aa12.42□□□□□ -0.42
LSM7-205ENST00000589532 DSCR10P59022 87 aa12.42□□□□□ -0.42
LSM7-205ENST00000589532 Q75L30 129 aa12.41□□□□□ -0.42
LSM7-205ENST00000589532 ETDBQ3ZM63 59 aa12.39□□□□□ -0.43
LSM7-205ENST00000589532 A8MWP4 228 aa12.38□□□□□ -0.43
LSM7-205ENST00000589532 ATP11AUNQ6ZP68 121 aa12.37□□□□□ -0.43
LSM7-205ENST00000589532 C20orf166-AS1Q96NR2 134 aa12.35□□□□□ -0.43
LSM7-205ENST00000589532 UBL5Q9BZL1 73 aa12.34□□□□□ -0.43
LSM7-205ENST00000589532 BPY2O14599 106 aa12.33□□□□□ -0.44
LSM7-205ENST00000589532 A8MUU9 505 aa12.32□□□□□ -0.44
LSM7-205ENST00000589532 Q6ZVQ6 151 aa12.31□□□□□ -0.44
LSM7-205ENST00000589532 A0A1B0GV90 55 aa12.28□□□□□ -0.44
LSM7-205ENST00000589532 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
LSM7-205ENST00000589532 PRR15Q8IV56 129 aa12.27□□□□□ -0.45
LSM7-205ENST00000589532 KRTAP16-1A8MUX0 517 aa12.26□□□□□ -0.45
LSM7-205ENST00000589532 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
LSM7-205ENST00000589532 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
LSM7-205ENST00000589532 LINC00846Q9NV44 126 aa12.25□□□□□ -0.45
LSM7-205ENST00000589532 ACYP1P07311 99 aa12.2□□□□□ -0.46
LSM7-205ENST00000589532 USH2AO75445 5202 aa12.19□□□□□ -0.46
LSM7-205ENST00000589532 SSPOA2VEC9 5147 aa12.17□□□□□ -0.46
LSM7-205ENST00000589532 K7EQZ3 153 aa12.17□□□□□ -0.46
LSM7-205ENST00000589532 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
LSM7-205ENST00000589532 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
LSM7-205ENST00000589532 KRTAP9-8Q9BYQ0 159 aa12.12□□□□□ -0.47
LSM7-205ENST00000589532 MMP24-AS1A0A0U1RRL7 71 aa12.11□□□□□ -0.47
LSM7-205ENST00000589532 Q8N9P0 234 aaPredicted RBP12.11□□□□□ -0.47
LSM7-205ENST00000589532 hDV103S1A0JD37 113 aa12.1□□□□□ -0.47
LSM7-205ENST00000589532 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
LSM7-205ENST00000589532 CXCL6P80162 114 aa12.08□□□□□ -0.48
LSM7-205ENST00000589532 Q8N9L7 120 aa12.05□□□□□ -0.48
LSM7-205ENST00000589532 ZCCHC13Q8WW36 166 aaKnown RBP12.04□□□□□ -0.48
LSM7-205ENST00000589532 CASC2Q6XLA1 102 aa12.03□□□□□ -0.48
LSM7-205ENST00000589532 KRTAP9-7A8MTY7 169 aa12.02□□□□□ -0.49
LSM7-205ENST00000589532 J3QR89 54 aa12.02□□□□□ -0.49
LSM7-205ENST00000589532 NDUFS5O43920 106 aa12.01□□□□□ -0.49
LSM7-205ENST00000589532 WFDC13Q8IUB5 93 aa12□□□□□ -0.49
LSM7-205ENST00000589532 ATP5EP2Q5VTU8 51 aa11.99□□□□□ -0.49
LSM7-205ENST00000589532 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
LSM7-205ENST00000589532 MPLKIPQ8TAP9 179 aa11.94□□□□□ -0.5
LSM7-205ENST00000589532 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.93□□□□□ -0.5
LSM7-205ENST00000589532 MT2AP02795 61 aa11.91□□□□□ -0.5
LSM7-205ENST00000589532 HRES1P13985 223 aa11.89□□□□□ -0.51
LSM7-205ENST00000589532 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
LSM7-205ENST00000589532 FCGBPQ9Y6R7 5405 aaPredicted RBP11.84□□□□□ -0.51
LSM7-205ENST00000589532 MT1FP04733 61 aa11.83□□□□□ -0.52
LSM7-205ENST00000589532 SPINK7P58062 85 aa11.83□□□□□ -0.52
LSM7-205ENST00000589532 RBM12B-AS1Q9P1G2 102 aa11.83□□□□□ -0.52
LSM7-205ENST00000589532 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
LSM7-205ENST00000589532 FAM236DA0A1B0GTK5 79 aa11.79□□□□□ -0.52
LSM7-205ENST00000589532 FAM236CP0DP71 79 aa11.79□□□□□ -0.52
LSM7-205ENST00000589532 TP53AIP1Q9HCN2 124 aa11.79□□□□□ -0.52
LSM7-205ENST00000589532 LCE2BO14633 110 aa11.77□□□□□ -0.53
LSM7-205ENST00000589532 KRTAP9-3Q9BYQ3 159 aa11.75□□□□□ -0.53
LSM7-205ENST00000589532 K7ERU9 68 aa11.72□□□□□ -0.53
LSM7-205ENST00000589532 Q5W150 140 aa11.7□□□□□ -0.54
LSM7-205ENST00000589532 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
LSM7-205ENST00000589532 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
LSM7-205ENST00000589532 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
LSM7-205ENST00000589532 KRTAP19-1Q8IUB9 90 aa11.66□□□□□ -0.54
LSM7-205ENST00000589532 KRTAP10-10P60014 251 aa11.63□□□□□ -0.55
LSM7-205ENST00000589532 A0A087WVE0 104 aa11.59□□□□□ -0.55
LSM7-205ENST00000589532 UQCRQO14949 82 aa11.55□□□□□ -0.56
LSM7-205ENST00000589532 TRAV22A0A0B4J277 110 aa11.54□□□□□ -0.56
LSM7-205ENST00000589532 IMUPQ9GZP8 106 aa11.49□□□□□ -0.57
LSM7-205ENST00000589532 ATOX1O00244 68 aa11.48□□□□□ -0.57
LSM7-205ENST00000589532 LOC101927531A0A1B0GV80 90 aa11.46□□□□□ -0.57
LSM7-205ENST00000589532 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
LSM7-205ENST00000589532 H0Y9P7 68 aa11.42□□□□□ -0.58
LSM7-205ENST00000589532 MACF1Q9UPN3 7388 aaKnown RBP11.41□□□□□ -0.58
LSM7-205ENST00000589532 KRTAP19-6Q3LI70 58 aa11.4□□□□□ -0.58
LSM7-205ENST00000589532 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
LSM7-205ENST00000589532 C4orf26Q17RF5 130 aa11.38□□□□□ -0.59
LSM7-205ENST00000589532 MT-ATP8P03928 68 aa11.37□□□□□ -0.59
LSM7-205ENST00000589532 MP68P56378 58 aa11.37□□□□□ -0.59
LSM7-205ENST00000589532 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
LSM7-205ENST00000589532 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
LSM7-205ENST00000589532 SYNE2Q8WXH0 6885 aaKnown RBP11.36□□□□□ -0.59
LSM7-205ENST00000589532 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
LSM7-205ENST00000589532 C1orf64Q8NEQ6 169 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 483.7 ms