RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 PDE6GP18545 87 aa12.21□□□□□ -0.45
LSM7-204ENST00000587502 C14orf132Q9NPU4 83 aa12.21□□□□□ -0.45
LSM7-204ENST00000587502 IGKV4-1P06312 121 aa12.2□□□□□ -0.46
LSM7-204ENST00000587502 C21orf62-AS1Q17RA5 79 aa12.19□□□□□ -0.46
LSM7-204ENST00000587502 DEFB116Q30KQ4 102 aa12.19□□□□□ -0.46
LSM7-204ENST00000587502 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
LSM7-204ENST00000587502 A8MUU9 505 aa12.18□□□□□ -0.46
LSM7-204ENST00000587502 A0A1B0GW54 56 aa12.16□□□□□ -0.46
LSM7-204ENST00000587502 K7EP34 96 aa12.16□□□□□ -0.46
LSM7-204ENST00000587502 M0R2T5 61 aa12.15□□□□□ -0.46
LSM7-204ENST00000587502 DSCR10P59022 87 aa12.13□□□□□ -0.47
LSM7-204ENST00000587502 LINC00313P59037 77 aa12.12□□□□□ -0.47
LSM7-204ENST00000587502 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
LSM7-204ENST00000587502 GTF2H5Q6ZYL4 71 aa12.11□□□□□ -0.47
LSM7-204ENST00000587502 KRTAP10-6P60371 365 aaPredicted RBP12.09□□□□□ -0.47
LSM7-204ENST00000587502 LORP23490 312 aaPredicted RBP12.08□□□□□ -0.48
LSM7-204ENST00000587502 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
LSM7-204ENST00000587502 FLGP20930 4061 aaPredicted RBP12.07□□□□□ -0.48
LSM7-204ENST00000587502 NOTCH2NLQ7Z3S9 236 aa12.06□□□□□ -0.48
LSM7-204ENST00000587502 J3KT08 172 aa12.05□□□□□ -0.48
LSM7-204ENST00000587502 KRTAP16-1A8MUX0 517 aa12.03□□□□□ -0.48
LSM7-204ENST00000587502 IGHV6-1A0A0B4J1U7 121 aa12.02□□□□□ -0.49
LSM7-204ENST00000587502 A0A1B0GVX0 72 aa12.02□□□□□ -0.49
LSM7-204ENST00000587502 F8W1H4 67 aa11.98□□□□□ -0.49
LSM7-204ENST00000587502 NREPQ16612 68 aa11.98□□□□□ -0.49
LSM7-204ENST00000587502 C8orf87E5RJ46 101 aa11.96□□□□□ -0.49
LSM7-204ENST00000587502 A8MWP4 228 aa11.93□□□□□ -0.5
LSM7-204ENST00000587502 NDUFB1O75438 58 aa11.93□□□□□ -0.5
LSM7-204ENST00000587502 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
LSM7-204ENST00000587502 PRR15Q8IV56 129 aa11.85□□□□□ -0.51
LSM7-204ENST00000587502 C8orf17Q9NRJ1 99 aa11.85□□□□□ -0.51
LSM7-204ENST00000587502 ETDBQ3ZM63 59 aa11.83□□□□□ -0.52
LSM7-204ENST00000587502 Q6ZVQ6 151 aa11.82□□□□□ -0.52
LSM7-204ENST00000587502 RBM12B-AS1Q9P1G2 102 aa11.82□□□□□ -0.52
LSM7-204ENST00000587502 KRTAP9-7A8MTY7 169 aa11.81□□□□□ -0.52
LSM7-204ENST00000587502 FAM236DA0A1B0GTK5 79 aa11.8□□□□□ -0.52
LSM7-204ENST00000587502 FAM236CP0DP71 79 aa11.8□□□□□ -0.52
LSM7-204ENST00000587502 BPY2O14599 106 aa11.78□□□□□ -0.52
LSM7-204ENST00000587502 Q8N9P0 234 aaPredicted RBP11.78□□□□□ -0.52
LSM7-204ENST00000587502 LINC00846Q9NV44 126 aa11.78□□□□□ -0.52
LSM7-204ENST00000587502 A0A1B0GV90 55 aa11.77□□□□□ -0.53
LSM7-204ENST00000587502 K7EQZ3 153 aa11.76□□□□□ -0.53
LSM7-204ENST00000587502 HRES1P13985 223 aa11.74□□□□□ -0.53
LSM7-204ENST00000587502 MPLKIPQ8TAP9 179 aa11.74□□□□□ -0.53
LSM7-204ENST00000587502 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
LSM7-204ENST00000587502 MMP24-AS1A0A0U1RRL7 71 aa11.73□□□□□ -0.53
LSM7-204ENST00000587502 UBL5Q9BZL1 73 aa11.71□□□□□ -0.53
LSM7-204ENST00000587502 TMEM254Q8TBM7 123 aa11.68□□□□□ -0.54
LSM7-204ENST00000587502 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.67□□□□□ -0.54
LSM7-204ENST00000587502 MRPL34Q9BQ48 92 aaKnown RBP11.67□□□□□ -0.54
LSM7-204ENST00000587502 Q8N9L7 120 aa11.66□□□□□ -0.54
LSM7-204ENST00000587502 hDV103S1A0JD37 113 aa11.65□□□□□ -0.54
LSM7-204ENST00000587502 KRTAP9-8Q9BYQ0 159 aa11.65□□□□□ -0.54
LSM7-204ENST00000587502 SPINK7P58062 85 aa11.63□□□□□ -0.55
LSM7-204ENST00000587502 ACYP1P07311 99 aa11.58□□□□□ -0.56
LSM7-204ENST00000587502 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
LSM7-204ENST00000587502 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
LSM7-204ENST00000587502 CASC2Q6XLA1 102 aa11.54□□□□□ -0.56
LSM7-204ENST00000587502 NDUFS5O43920 106 aa11.52□□□□□ -0.57
LSM7-204ENST00000587502 CXCL6P80162 114 aa11.5□□□□□ -0.57
LSM7-204ENST00000587502 HCG22E2RYF7 251 aa11.47□□□□□ -0.57
LSM7-204ENST00000587502 MT2AP02795 61 aa11.47□□□□□ -0.57
LSM7-204ENST00000587502 Q5W150 140 aa11.43□□□□□ -0.58
LSM7-204ENST00000587502 KRTAP10-10P60014 251 aa11.38□□□□□ -0.59
LSM7-204ENST00000587502 MT1FP04733 61 aa11.37□□□□□ -0.59
LSM7-204ENST00000587502 J3QR89 54 aa11.36□□□□□ -0.59
LSM7-204ENST00000587502 ATP5EP2Q5VTU8 51 aa11.36□□□□□ -0.59
LSM7-204ENST00000587502 LINC00643Q86TS7 51 aa11.32□□□□□ -0.6
LSM7-204ENST00000587502 USH2AO75445 5202 aa11.32□□□□□ -0.6
LSM7-204ENST00000587502 KRTAP9-3Q9BYQ3 159 aa11.29□□□□□ -0.6
LSM7-204ENST00000587502 IGKV2D-30A0A075B6S6 120 aa11.28□□□□□ -0.6
LSM7-204ENST00000587502 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
LSM7-204ENST00000587502 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
LSM7-204ENST00000587502 H1FX-AS1Q4G0G2 97 aa11.25□□□□□ -0.61
LSM7-204ENST00000587502 TP53AIP1Q9HCN2 124 aa11.24□□□□□ -0.61
LSM7-204ENST00000587502 SSPOA2VEC9 5147 aa11.22□□□□□ -0.61
LSM7-204ENST00000587502 HIST1H4AP62805 103 aaKnown RBP11.22□□□□□ -0.61
LSM7-204ENST00000587502 LCE2BO14633 110 aa11.21□□□□□ -0.61
LSM7-204ENST00000587502 K7ERU9 68 aa11.13□□□□□ -0.63
LSM7-204ENST00000587502 A0A087WVE0 104 aa11.11□□□□□ -0.63
LSM7-204ENST00000587502 C4orf26Q17RF5 130 aa11.07□□□□□ -0.64
LSM7-204ENST00000587502 KRTAP19-1Q8IUB9 90 aa11.05□□□□□ -0.64
LSM7-204ENST00000587502 FCGBPQ9Y6R7 5405 aaPredicted RBP11.03□□□□□ -0.64
LSM7-204ENST00000587502 TRAV22A0A0B4J277 110 aa11.02□□□□□ -0.65
LSM7-204ENST00000587502 UQCRQO14949 82 aa11□□□□□ -0.65
LSM7-204ENST00000587502 SYNE2Q8WXH0 6885 aaKnown RBP11□□□□□ -0.65
LSM7-204ENST00000587502 CYP4F30PQ9H0H9 118 aa10.98□□□□□ -0.65
LSM7-204ENST00000587502 KRTAP3-1Q9BYR8 98 aa10.96□□□□□ -0.65
LSM7-204ENST00000587502 MACF1Q9UPN3 7388 aaKnown RBP10.93□□□□□ -0.66
LSM7-204ENST00000587502 LOC101927531A0A1B0GV80 90 aa10.93□□□□□ -0.66
LSM7-204ENST00000587502 IMUPQ9GZP8 106 aa10.93□□□□□ -0.66
LSM7-204ENST00000587502 H0Y9P7 68 aa10.91□□□□□ -0.66
LSM7-204ENST00000587502 C1orf64Q8NEQ6 169 aa10.91□□□□□ -0.66
LSM7-204ENST00000587502 MT-ATP8P03928 68 aa10.89□□□□□ -0.67
LSM7-204ENST00000587502 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
LSM7-204ENST00000587502 ATOX1O00244 68 aa10.88□□□□□ -0.67
LSM7-204ENST00000587502 KRTAP19-6Q3LI70 58 aa10.87□□□□□ -0.67
LSM7-204ENST00000587502 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
LSM7-204ENST00000587502 S4R3F8 94 aa10.84□□□□□ -0.67
LSM7-204ENST00000587502 C5orf47Q569G3 176 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms