RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 C14orf132Q9NPU4 83 aa12.56□□□□□ -0.4
ERCC2-209ENST00000586856 PDE6GP18545 87 aa12.54□□□□□ -0.4
ERCC2-209ENST00000586856 MT1HP80294 61 aa12.54□□□□□ -0.4
ERCC2-209ENST00000586856 A0A1B0GVX0 72 aa12.52□□□□□ -0.41
ERCC2-209ENST00000586856 COX6B2Q6YFQ2 88 aa12.51□□□□□ -0.41
ERCC2-209ENST00000586856 A0A1B0GW54 56 aa12.5□□□□□ -0.41
ERCC2-209ENST00000586856 J3KT08 172 aa12.5□□□□□ -0.41
ERCC2-209ENST00000586856 H3BT86 120 aa12.49□□□□□ -0.41
ERCC2-209ENST00000586856 MTURNQ8N3F0 131 aa12.49□□□□□ -0.41
ERCC2-209ENST00000586856 C8orf87E5RJ46 101 aa12.48□□□□□ -0.41
ERCC2-209ENST00000586856 SPCS1Q9Y6A9 102 aa12.41□□□□□ -0.42
ERCC2-209ENST00000586856 NDUFB1O75438 58 aa12.39□□□□□ -0.43
ERCC2-209ENST00000586856 A8MWP4 228 aa12.37□□□□□ -0.43
ERCC2-209ENST00000586856 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
ERCC2-209ENST00000586856 NREPQ16612 68 aa12.34□□□□□ -0.43
ERCC2-209ENST00000586856 IGKV3D-7A0A0C4DH55 119 aa12.32□□□□□ -0.44
ERCC2-209ENST00000586856 M0R2T5 61 aa12.31□□□□□ -0.44
ERCC2-209ENST00000586856 C8orf17Q9NRJ1 99 aa12.31□□□□□ -0.44
ERCC2-209ENST00000586856 FLGP20930 4061 aaPredicted RBP12.28□□□□□ -0.44
ERCC2-209ENST00000586856 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
ERCC2-209ENST00000586856 KRTAP10-6P60371 365 aaPredicted RBP12.27□□□□□ -0.45
ERCC2-209ENST00000586856 LORP23490 312 aaPredicted RBP12.25□□□□□ -0.45
ERCC2-209ENST00000586856 PRR15Q8IV56 129 aa12.25□□□□□ -0.45
ERCC2-209ENST00000586856 K7EP34 96 aa12.24□□□□□ -0.45
ERCC2-209ENST00000586856 Q8N9P0 234 aaPredicted RBP12.24□□□□□ -0.45
ERCC2-209ENST00000586856 ZCCHC13Q8WW36 166 aaKnown RBP12.24□□□□□ -0.45
ERCC2-209ENST00000586856 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
ERCC2-209ENST00000586856 PRO0461Q9UI25 63 aa12.22□□□□□ -0.45
ERCC2-209ENST00000586856 KRTAP9-6A0A140TA67 174 aa12.21□□□□□ -0.45
ERCC2-209ENST00000586856 PCP4L1A6NKN8 68 aa12.2□□□□□ -0.46
ERCC2-209ENST00000586856 Q6ZVQ6 151 aa12.2□□□□□ -0.46
ERCC2-209ENST00000586856 HRES1P13985 223 aa12.19□□□□□ -0.46
ERCC2-209ENST00000586856 MMP24-AS1A0A0U1RRL7 71 aa12.17□□□□□ -0.46
ERCC2-209ENST00000586856 K7EQZ3 153 aa12.17□□□□□ -0.46
ERCC2-209ENST00000586856 BPY2O14599 106 aa12.15□□□□□ -0.46
ERCC2-209ENST00000586856 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.46
ERCC2-209ENST00000586856 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
ERCC2-209ENST00000586856 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
ERCC2-209ENST00000586856 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
ERCC2-209ENST00000586856 RBM12B-AS1Q9P1G2 102 aa12.12□□□□□ -0.47
ERCC2-209ENST00000586856 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
ERCC2-209ENST00000586856 GTF2H5Q6ZYL4 71 aa12.09□□□□□ -0.47
ERCC2-209ENST00000586856 SPINK7P58062 85 aa12.08□□□□□ -0.48
ERCC2-209ENST00000586856 hDV103S1A0JD37 113 aa12.07□□□□□ -0.48
ERCC2-209ENST00000586856 FSIP2Q5CZC0 6907 aa12.04□□□□□ -0.48
ERCC2-209ENST00000586856 Q8N9L7 120 aa12.03□□□□□ -0.48
ERCC2-209ENST00000586856 LINC00846Q9NV44 126 aa12.03□□□□□ -0.48
ERCC2-209ENST00000586856 NDUFS5O43920 106 aa12□□□□□ -0.49
ERCC2-209ENST00000586856 UBL5Q9BZL1 73 aa12□□□□□ -0.49
ERCC2-209ENST00000586856 F8W1H4 67 aa11.97□□□□□ -0.49
ERCC2-209ENST00000586856 WFDC13Q8IUB5 93 aa11.97□□□□□ -0.49
ERCC2-209ENST00000586856 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
ERCC2-209ENST00000586856 ETDBQ3ZM63 59 aa11.93□□□□□ -0.5
ERCC2-209ENST00000586856 CRCT1Q9UGL9 99 aa11.92□□□□□ -0.5
ERCC2-209ENST00000586856 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
ERCC2-209ENST00000586856 HCG22E2RYF7 251 aa11.86□□□□□ -0.51
ERCC2-209ENST00000586856 Q5W150 140 aa11.84□□□□□ -0.51
ERCC2-209ENST00000586856 IGKV2D-30A0A075B6S6 120 aa11.8□□□□□ -0.52
ERCC2-209ENST00000586856 IGKV2-30P06310 120 aa11.8□□□□□ -0.52
ERCC2-209ENST00000586856 CXCL6P80162 114 aa11.77□□□□□ -0.53
ERCC2-209ENST00000586856 C7orf65Q6ZTY9 151 aa11.77□□□□□ -0.53
ERCC2-209ENST00000586856 MT2AP02795 61 aa11.76□□□□□ -0.53
ERCC2-209ENST00000586856 MT1FP04733 61 aa11.67□□□□□ -0.54
ERCC2-209ENST00000586856 ACYP1P07311 99 aa11.64□□□□□ -0.55
ERCC2-209ENST00000586856 H1FX-AS1Q4G0G2 97 aa11.64□□□□□ -0.55
ERCC2-209ENST00000586856 FAM240AA0A1B0GVK7 77 aa11.62□□□□□ -0.55
ERCC2-209ENST00000586856 KRTAP10-10P60014 251 aa11.59□□□□□ -0.55
ERCC2-209ENST00000586856 TP53AIP1Q9HCN2 124 aa11.58□□□□□ -0.56
ERCC2-209ENST00000586856 C4orf26Q17RF5 130 aa11.56□□□□□ -0.56
ERCC2-209ENST00000586856 A0A1B0GV90 55 aa11.54□□□□□ -0.56
ERCC2-209ENST00000586856 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
ERCC2-209ENST00000586856 KRTAP9-3Q9BYQ3 159 aa11.5□□□□□ -0.57
ERCC2-209ENST00000586856 USH2AO75445 5202 aa11.5□□□□□ -0.57
ERCC2-209ENST00000586856 HIST1H4AP62805 103 aaKnown RBP11.44□□□□□ -0.58
ERCC2-209ENST00000586856 SSPOA2VEC9 5147 aa11.44□□□□□ -0.58
ERCC2-209ENST00000586856 LCE2BO14633 110 aa11.42□□□□□ -0.58
ERCC2-209ENST00000586856 TRAV22A0A0B4J277 110 aa11.38□□□□□ -0.59
ERCC2-209ENST00000586856 LINC00643Q86TS7 51 aa11.38□□□□□ -0.59
ERCC2-209ENST00000586856 KRTAP3-1Q9BYR8 98 aa11.38□□□□□ -0.59
ERCC2-209ENST00000586856 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
ERCC2-209ENST00000586856 CYP4F30PQ9H0H9 118 aa11.33□□□□□ -0.6
ERCC2-209ENST00000586856 A0A087WVE0 104 aa11.32□□□□□ -0.6
ERCC2-209ENST00000586856 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
ERCC2-209ENST00000586856 S4R3F8 94 aa11.29□□□□□ -0.6
ERCC2-209ENST00000586856 UQCRQO14949 82 aa11.28□□□□□ -0.6
ERCC2-209ENST00000586856 C5orf47Q569G3 176 aa11.27□□□□□ -0.61
ERCC2-209ENST00000586856 H0Y9P7 68 aa11.23□□□□□ -0.61
ERCC2-209ENST00000586856 LCA10Q71F78 164 aa11.21□□□□□ -0.61
ERCC2-209ENST00000586856 J3QR89 54 aa11.2□□□□□ -0.62
ERCC2-209ENST00000586856 ATOX1O00244 68 aa11.2□□□□□ -0.62
ERCC2-209ENST00000586856 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
ERCC2-209ENST00000586856 KRTAP19-1Q8IUB9 90 aa11.15□□□□□ -0.62
ERCC2-209ENST00000586856 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.11□□□□□ -0.63
ERCC2-209ENST00000586856 FCGBPQ9Y6R7 5405 aaPredicted RBP11.1□□□□□ -0.63
ERCC2-209ENST00000586856 OCR1Q9BZK8 76 aa11.09□□□□□ -0.63
ERCC2-209ENST00000586856 FAM236AA0A1B0GUQ0 79 aa11.08□□□□□ -0.64
ERCC2-209ENST00000586856 FAM236BA0A1B0GV22 79 aa11.08□□□□□ -0.64
ERCC2-209ENST00000586856 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
ERCC2-209ENST00000586856 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
ERCC2-209ENST00000586856 MP68P56378 58 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms