RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 C8orf87E5RJ46 101 aa10.67□□□□□ -0.7
CSNK1D-216ENST00000581108 MPLKIPQ8TAP9 179 aa10.67□□□□□ -0.7
CSNK1D-216ENST00000581108 RBM12B-AS1Q9P1G2 102 aa10.64□□□□□ -0.71
CSNK1D-216ENST00000581108 Q6ZQT0 140 aa10.63□□□□□ -0.71
CSNK1D-216ENST00000581108 NAA38Q9BRA0 125 aaKnown RBP10.62□□□□□ -0.71
CSNK1D-216ENST00000581108 J3KT08 172 aa10.61□□□□□ -0.71
CSNK1D-216ENST00000581108 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
CSNK1D-216ENST00000581108 ATXN8Q156A1 80 aa10.58□□□□□ -0.72
CSNK1D-216ENST00000581108 M0R143 59 aa10.57□□□□□ -0.72
CSNK1D-216ENST00000581108 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-216ENST00000581108 MT2AP02795 61 aa10.56□□□□□ -0.72
CSNK1D-216ENST00000581108 USH2AO75445 5202 aa10.56□□□□□ -0.72
CSNK1D-216ENST00000581108 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
CSNK1D-216ENST00000581108 NDUFB1O75438 58 aa10.54□□□□□ -0.72
CSNK1D-216ENST00000581108 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
CSNK1D-216ENST00000581108 SPINK7P58062 85 aa10.51□□□□□ -0.73
CSNK1D-216ENST00000581108 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
CSNK1D-216ENST00000581108 A8MWP4 228 aa10.49□□□□□ -0.73
CSNK1D-216ENST00000581108 SSPOA2VEC9 5147 aa10.49□□□□□ -0.73
CSNK1D-216ENST00000581108 A0A1B0GW54 56 aa10.48□□□□□ -0.73
CSNK1D-216ENST00000581108 MT1FP04733 61 aa10.48□□□□□ -0.73
CSNK1D-216ENST00000581108 C14orf132Q9NPU4 83 aa10.48□□□□□ -0.73
CSNK1D-216ENST00000581108 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
CSNK1D-216ENST00000581108 PDE6GP18545 87 aa10.47□□□□□ -0.73
CSNK1D-216ENST00000581108 MTURNQ8N3F0 131 aa10.47□□□□□ -0.73
CSNK1D-216ENST00000581108 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.73
CSNK1D-216ENST00000581108 KRTAP10-10P60014 251 aa10.43□□□□□ -0.74
CSNK1D-216ENST00000581108 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
CSNK1D-216ENST00000581108 SMIM6P0DI80 62 aa10.41□□□□□ -0.74
CSNK1D-216ENST00000581108 Q6ZVQ6 151 aa10.4□□□□□ -0.74
CSNK1D-216ENST00000581108 LCE2BO14633 110 aa10.39□□□□□ -0.75
CSNK1D-216ENST00000581108 NREPQ16612 68 aa10.39□□□□□ -0.75
CSNK1D-216ENST00000581108 PRR15Q8IV56 129 aa10.39□□□□□ -0.75
CSNK1D-216ENST00000581108 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
CSNK1D-216ENST00000581108 BATFQ16520 125 aa10.37□□□□□ -0.75
CSNK1D-216ENST00000581108 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
CSNK1D-216ENST00000581108 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
CSNK1D-216ENST00000581108 MMP24-AS1A0A0U1RRL7 71 aa10.31□□□□□ -0.76
CSNK1D-216ENST00000581108 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
CSNK1D-216ENST00000581108 MRPL34Q9BQ48 92 aaKnown RBP10.3□□□□□ -0.76
CSNK1D-216ENST00000581108 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
CSNK1D-216ENST00000581108 FCGBPQ9Y6R7 5405 aaPredicted RBP10.27□□□□□ -0.76
CSNK1D-216ENST00000581108 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
CSNK1D-216ENST00000581108 K7EQZ3 153 aa10.27□□□□□ -0.77
CSNK1D-216ENST00000581108 H3BT86 120 aa10.25□□□□□ -0.77
CSNK1D-216ENST00000581108 KRTAP19-1Q8IUB9 90 aa10.25□□□□□ -0.77
CSNK1D-216ENST00000581108 hDV103S1A0JD37 113 aa10.24□□□□□ -0.77
CSNK1D-216ENST00000581108 TAX1BP3O14907 124 aa10.24□□□□□ -0.77
CSNK1D-216ENST00000581108 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
CSNK1D-216ENST00000581108 KRTAP9-7A8MTY7 169 aa10.22□□□□□ -0.77
CSNK1D-216ENST00000581108 NDUFS5O43920 106 aa10.22□□□□□ -0.77
CSNK1D-216ENST00000581108 BPY2O14599 106 aa10.18□□□□□ -0.78
CSNK1D-216ENST00000581108 LOC105371267A0A1B0GV96 52 aa10.14□□□□□ -0.79
CSNK1D-216ENST00000581108 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
CSNK1D-216ENST00000581108 Q5W150 140 aa10.13□□□□□ -0.79
CSNK1D-216ENST00000581108 IGKV2D-30A0A075B6S6 120 aa10.12□□□□□ -0.79
CSNK1D-216ENST00000581108 IGKV2-30P06310 120 aa10.12□□□□□ -0.79
CSNK1D-216ENST00000581108 Q8N9L7 120 aa10.12□□□□□ -0.79
CSNK1D-216ENST00000581108 CASC2Q6XLA1 102 aa10.07□□□□□ -0.8
CSNK1D-216ENST00000581108 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
CSNK1D-216ENST00000581108 MACF1Q9UPN3 7388 aaKnown RBP10.07□□□□□ -0.8
CSNK1D-216ENST00000581108 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
CSNK1D-216ENST00000581108 C7orf65Q6ZTY9 151 aa10.06□□□□□ -0.8
CSNK1D-216ENST00000581108 HCG22E2RYF7 251 aa10.04□□□□□ -0.8
CSNK1D-216ENST00000581108 KRTAP19-6Q3LI70 58 aa10.01□□□□□ -0.81
CSNK1D-216ENST00000581108 SYNE2Q8WXH0 6885 aaKnown RBP9.98□□□□□ -0.81
CSNK1D-216ENST00000581108 C4orf26Q17RF5 130 aa9.97□□□□□ -0.81
CSNK1D-216ENST00000581108 LINC00846Q9NV44 126 aa9.97□□□□□ -0.81
CSNK1D-216ENST00000581108 CXCL6P80162 114 aa9.95□□□□□ -0.82
CSNK1D-216ENST00000581108 PRO0461Q9UI25 63 aa9.94□□□□□ -0.82
CSNK1D-216ENST00000581108 UBL5Q9BZL1 73 aa9.93□□□□□ -0.82
CSNK1D-216ENST00000581108 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
CSNK1D-216ENST00000581108 K7EP34 96 aa9.87□□□□□ -0.83
CSNK1D-216ENST00000581108 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
CSNK1D-216ENST00000581108 C5orf47Q569G3 176 aa9.82□□□□□ -0.84
CSNK1D-216ENST00000581108 C1orf64Q8NEQ6 169 aa9.76□□□□□ -0.85
CSNK1D-216ENST00000581108 S4R3F8 94 aa9.74□□□□□ -0.85
CSNK1D-216ENST00000581108 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
CSNK1D-216ENST00000581108 FAM236AA0A1B0GUQ0 79 aa9.71□□□□□ -0.86
CSNK1D-216ENST00000581108 FAM236BA0A1B0GV22 79 aa9.71□□□□□ -0.86
CSNK1D-216ENST00000581108 GTF2H5Q6ZYL4 71 aa9.71□□□□□ -0.86
CSNK1D-216ENST00000581108 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
CSNK1D-216ENST00000581108 LCA10Q71F78 164 aa9.69□□□□□ -0.86
CSNK1D-216ENST00000581108 F8W1H4 67 aa9.68□□□□□ -0.86
CSNK1D-216ENST00000581108 ETDBQ3ZM63 59 aa9.68□□□□□ -0.86
CSNK1D-216ENST00000581108 KRTAP6-3Q3LI67 103 aa9.6□□□□□ -0.87
CSNK1D-216ENST00000581108 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
CSNK1D-216ENST00000581108 PCP4L1A6NKN8 68 aa9.58□□□□□ -0.88
CSNK1D-216ENST00000581108 MT1BP07438 61 aa9.58□□□□□ -0.88
CSNK1D-216ENST00000581108 SPRR2GQ9BYE4 73 aa9.57□□□□□ -0.88
CSNK1D-216ENST00000581108 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
CSNK1D-216ENST00000581108 Q5VV11 94 aa9.54□□□□□ -0.88
CSNK1D-216ENST00000581108 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
CSNK1D-216ENST00000581108 A6NN06 94 aa9.51□□□□□ -0.89
CSNK1D-216ENST00000581108 A0A087WVE0 104 aa9.5□□□□□ -0.89
CSNK1D-216ENST00000581108 TRAV22A0A0B4J277 110 aa9.5□□□□□ -0.89
CSNK1D-216ENST00000581108 KLKP1Q107X0 134 aa9.5□□□□□ -0.89
CSNK1D-216ENST00000581108 LOC101927531A0A1B0GV80 90 aa9.47□□□□□ -0.89
CSNK1D-216ENST00000581108 ACYP1P07311 99 aa9.45□□□□□ -0.9
CSNK1D-216ENST00000581108 HIST1H4AP62805 103 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 688.9 ms