RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 PDE6GP18545 87 aa6.92□□□□□ -1.3
NUP85-215ENST00000580879 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
NUP85-215ENST00000580879 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
NUP85-215ENST00000580879 H3BT86 120 aa6.91□□□□□ -1.3
NUP85-215ENST00000580879 MT1HP80294 61 aa6.9□□□□□ -1.3
NUP85-215ENST00000580879 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
NUP85-215ENST00000580879 J3KT08 172 aa6.89□□□□□ -1.31
NUP85-215ENST00000580879 COX6B2Q6YFQ2 88 aa6.89□□□□□ -1.31
NUP85-215ENST00000580879 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
NUP85-215ENST00000580879 A0A1B0GW54 56 aa6.87□□□□□ -1.31
NUP85-215ENST00000580879 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
NUP85-215ENST00000580879 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
NUP85-215ENST00000580879 NDUFB1O75438 58 aa6.84□□□□□ -1.31
NUP85-215ENST00000580879 NREPQ16612 68 aa6.84□□□□□ -1.31
NUP85-215ENST00000580879 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.32
NUP85-215ENST00000580879 A8MWP4 228 aa6.83□□□□□ -1.32
NUP85-215ENST00000580879 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
NUP85-215ENST00000580879 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
NUP85-215ENST00000580879 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
NUP85-215ENST00000580879 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
NUP85-215ENST00000580879 K7EP34 96 aa6.8□□□□□ -1.32
NUP85-215ENST00000580879 M0R2T5 61 aa6.79□□□□□ -1.32
NUP85-215ENST00000580879 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
NUP85-215ENST00000580879 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
NUP85-215ENST00000580879 ZCCHC13Q8WW36 166 aaKnown RBP6.76□□□□□ -1.33
NUP85-215ENST00000580879 K7EQZ3 153 aa6.75□□□□□ -1.33
NUP85-215ENST00000580879 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
NUP85-215ENST00000580879 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
NUP85-215ENST00000580879 Q6ZVQ6 151 aa6.74□□□□□ -1.33
NUP85-215ENST00000580879 MMP24-AS1A0A0U1RRL7 71 aa6.73□□□□□ -1.33
NUP85-215ENST00000580879 BPY2O14599 106 aa6.73□□□□□ -1.33
NUP85-215ENST00000580879 HRES1P13985 223 aa6.72□□□□□ -1.33
NUP85-215ENST00000580879 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
NUP85-215ENST00000580879 GTF2H5Q6ZYL4 71 aa6.71□□□□□ -1.34
NUP85-215ENST00000580879 FAM236DA0A1B0GTK5 79 aa6.7□□□□□ -1.34
NUP85-215ENST00000580879 FAM236CP0DP71 79 aa6.7□□□□□ -1.34
NUP85-215ENST00000580879 Q8N9L7 120 aa6.7□□□□□ -1.34
NUP85-215ENST00000580879 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
NUP85-215ENST00000580879 MRPL34Q9BQ48 92 aaKnown RBP6.69□□□□□ -1.34
NUP85-215ENST00000580879 hDV103S1A0JD37 113 aa6.68□□□□□ -1.34
NUP85-215ENST00000580879 SPINK7P58062 85 aa6.68□□□□□ -1.34
NUP85-215ENST00000580879 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
NUP85-215ENST00000580879 LINC00846Q9NV44 126 aa6.68□□□□□ -1.34
NUP85-215ENST00000580879 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
NUP85-215ENST00000580879 NDUFS5O43920 106 aa6.66□□□□□ -1.34
NUP85-215ENST00000580879 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
NUP85-215ENST00000580879 F8W1H4 67 aa6.65□□□□□ -1.34
NUP85-215ENST00000580879 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
NUP85-215ENST00000580879 ETDBQ3ZM63 59 aa6.64□□□□□ -1.35
NUP85-215ENST00000580879 UBL5Q9BZL1 73 aa6.64□□□□□ -1.35
NUP85-215ENST00000580879 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
NUP85-215ENST00000580879 FSIP2Q5CZC0 6907 aa6.6□□□□□ -1.35
NUP85-215ENST00000580879 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
NUP85-215ENST00000580879 Q5W150 140 aa6.57□□□□□ -1.36
NUP85-215ENST00000580879 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
NUP85-215ENST00000580879 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
NUP85-215ENST00000580879 IGKV2-30P06310 120 aa6.54□□□□□ -1.36
NUP85-215ENST00000580879 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
NUP85-215ENST00000580879 CXCL6P80162 114 aa6.5□□□□□ -1.37
NUP85-215ENST00000580879 C7orf65Q6ZTY9 151 aa6.49□□□□□ -1.37
NUP85-215ENST00000580879 MT2AP02795 61 aa6.47□□□□□ -1.37
NUP85-215ENST00000580879 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
NUP85-215ENST00000580879 A0A1B0GV90 55 aa6.46□□□□□ -1.38
NUP85-215ENST00000580879 ACYP1P07311 99 aa6.44□□□□□ -1.38
NUP85-215ENST00000580879 MT1FP04733 61 aa6.43□□□□□ -1.38
NUP85-215ENST00000580879 FAM240AA0A1B0GVK7 77 aa6.42□□□□□ -1.38
NUP85-215ENST00000580879 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
NUP85-215ENST00000580879 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
NUP85-215ENST00000580879 KRTAP10-10P60014 251 aa6.4□□□□□ -1.38
NUP85-215ENST00000580879 USH2AO75445 5202 aa6.4□□□□□ -1.39
NUP85-215ENST00000580879 TP53AIP1Q9HCN2 124 aa6.39□□□□□ -1.39
NUP85-215ENST00000580879 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
NUP85-215ENST00000580879 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
NUP85-215ENST00000580879 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
NUP85-215ENST00000580879 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
NUP85-215ENST00000580879 A0A087WVE0 104 aa6.31□□□□□ -1.4
NUP85-215ENST00000580879 LINC00643Q86TS7 51 aa6.31□□□□□ -1.4
NUP85-215ENST00000580879 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
NUP85-215ENST00000580879 TRAV22A0A0B4J277 110 aa6.29□□□□□ -1.4
NUP85-215ENST00000580879 LCE2BO14633 110 aa6.29□□□□□ -1.4
NUP85-215ENST00000580879 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
NUP85-215ENST00000580879 CYP4F30PQ9H0H9 118 aa6.27□□□□□ -1.41
NUP85-215ENST00000580879 UQCRQO14949 82 aa6.24□□□□□ -1.41
NUP85-215ENST00000580879 C5orf47Q569G3 176 aa6.24□□□□□ -1.41
NUP85-215ENST00000580879 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
NUP85-215ENST00000580879 H0Y9P7 68 aa6.23□□□□□ -1.41
NUP85-215ENST00000580879 S4R3F8 94 aa6.23□□□□□ -1.41
NUP85-215ENST00000580879 J3QR89 54 aa6.21□□□□□ -1.42
NUP85-215ENST00000580879 LCA10Q71F78 164 aa6.2□□□□□ -1.42
NUP85-215ENST00000580879 ATOX1O00244 68 aa6.18□□□□□ -1.42
NUP85-215ENST00000580879 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
NUP85-215ENST00000580879 OCR1Q9BZK8 76 aa6.15□□□□□ -1.42
NUP85-215ENST00000580879 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
NUP85-215ENST00000580879 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
NUP85-215ENST00000580879 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
NUP85-215ENST00000580879 FAM236AA0A1B0GUQ0 79 aa6.12□□□□□ -1.43
NUP85-215ENST00000580879 FAM236BA0A1B0GV22 79 aa6.12□□□□□ -1.43
NUP85-215ENST00000580879 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
NUP85-215ENST00000580879 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
NUP85-215ENST00000580879 MP68P56378 58 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms