RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 A0A1W2PPM0 123 aa3.46□□□□□ -1.86
TRAF4-213ENST00000578917 J3KT08 172 aa3.46□□□□□ -1.86
TRAF4-213ENST00000578917 Q6ZQT0 140 aa3.46□□□□□ -1.86
TRAF4-213ENST00000578917 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
TRAF4-213ENST00000578917 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 A0A1B0GW54 56 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 M0R2T5 61 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 LORP23490 312 aaPredicted RBP3.45□□□□□ -1.86
TRAF4-213ENST00000578917 NREPQ16612 68 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
TRAF4-213ENST00000578917 A0A1B0GVX0 72 aa3.44□□□□□ -1.86
TRAF4-213ENST00000578917 A8MUU9 505 aa3.44□□□□□ -1.86
TRAF4-213ENST00000578917 COL5A1-AS1Q5SY13 56 aa3.44□□□□□ -1.86
TRAF4-213ENST00000578917 C8orf87E5RJ46 101 aa3.43□□□□□ -1.86
TRAF4-213ENST00000578917 H3BT86 120 aa3.43□□□□□ -1.86
TRAF4-213ENST00000578917 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
TRAF4-213ENST00000578917 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
TRAF4-213ENST00000578917 SPCS1Q9Y6A9 102 aa3.43□□□□□ -1.86
TRAF4-213ENST00000578917 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
TRAF4-213ENST00000578917 A8MWP4 228 aa3.4□□□□□ -1.87
TRAF4-213ENST00000578917 FAM236DA0A1B0GTK5 79 aa3.39□□□□□ -1.87
TRAF4-213ENST00000578917 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
TRAF4-213ENST00000578917 FAM236CP0DP71 79 aa3.39□□□□□ -1.87
TRAF4-213ENST00000578917 MT1HP80294 61 aa3.39□□□□□ -1.87
TRAF4-213ENST00000578917 IGKV3D-7A0A0C4DH55 119 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 BPY2O14599 106 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 PRR15Q8IV56 129 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
TRAF4-213ENST00000578917 NDUFS5O43920 106 aa3.37□□□□□ -1.87
TRAF4-213ENST00000578917 Q6ZVQ6 151 aa3.37□□□□□ -1.87
TRAF4-213ENST00000578917 GTF2H5Q6ZYL4 71 aa3.37□□□□□ -1.87
TRAF4-213ENST00000578917 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
TRAF4-213ENST00000578917 K7EP34 96 aa3.36□□□□□ -1.87
TRAF4-213ENST00000578917 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
TRAF4-213ENST00000578917 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
TRAF4-213ENST00000578917 UBL5Q9BZL1 73 aa3.35□□□□□ -1.87
TRAF4-213ENST00000578917 hDV103S1A0JD37 113 aa3.34□□□□□ -1.87
TRAF4-213ENST00000578917 K7EQZ3 153 aa3.34□□□□□ -1.87
TRAF4-213ENST00000578917 SPINK7P58062 85 aa3.34□□□□□ -1.87
TRAF4-213ENST00000578917 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
TRAF4-213ENST00000578917 F8W1H4 67 aa3.33□□□□□ -1.88
TRAF4-213ENST00000578917 TMEM254Q8TBM7 123 aa3.33□□□□□ -1.88
TRAF4-213ENST00000578917 MRPL34Q9BQ48 92 aaKnown RBP3.33□□□□□ -1.88
TRAF4-213ENST00000578917 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
TRAF4-213ENST00000578917 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
TRAF4-213ENST00000578917 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
TRAF4-213ENST00000578917 WFDC13Q8IUB5 93 aa3.32□□□□□ -1.88
TRAF4-213ENST00000578917 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
TRAF4-213ENST00000578917 CASC2Q6XLA1 102 aa3.31□□□□□ -1.88
TRAF4-213ENST00000578917 Q8N9L7 120 aa3.31□□□□□ -1.88
TRAF4-213ENST00000578917 LINC00846Q9NV44 126 aa3.31□□□□□ -1.88
TRAF4-213ENST00000578917 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
TRAF4-213ENST00000578917 HRES1P13985 223 aa3.3□□□□□ -1.88
TRAF4-213ENST00000578917 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
TRAF4-213ENST00000578917 IGKV2D-30A0A075B6S6 120 aa3.28□□□□□ -1.88
TRAF4-213ENST00000578917 HCG22E2RYF7 251 aa3.28□□□□□ -1.88
TRAF4-213ENST00000578917 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
TRAF4-213ENST00000578917 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
TRAF4-213ENST00000578917 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
TRAF4-213ENST00000578917 CXCL6P80162 114 aa3.26□□□□□ -1.89
TRAF4-213ENST00000578917 ACYP1P07311 99 aa3.24□□□□□ -1.89
TRAF4-213ENST00000578917 Q5W150 140 aa3.24□□□□□ -1.89
TRAF4-213ENST00000578917 C7orf65Q6ZTY9 151 aa3.24□□□□□ -1.89
TRAF4-213ENST00000578917 H1FX-AS1Q4G0G2 97 aa3.22□□□□□ -1.89
TRAF4-213ENST00000578917 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
TRAF4-213ENST00000578917 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
TRAF4-213ENST00000578917 HIST1H4AP62805 103 aaKnown RBP3.2□□□□□ -1.9
TRAF4-213ENST00000578917 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
TRAF4-213ENST00000578917 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
TRAF4-213ENST00000578917 A0A1B0GV90 55 aa3.18□□□□□ -1.9
TRAF4-213ENST00000578917 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
TRAF4-213ENST00000578917 MT2AP02795 61 aa3.18□□□□□ -1.9
TRAF4-213ENST00000578917 ATP5EP2Q5VTU8 51 aa3.18□□□□□ -1.9
TRAF4-213ENST00000578917 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.91
TRAF4-213ENST00000578917 J3QR89 54 aa3.15□□□□□ -1.91
TRAF4-213ENST00000578917 MT1FP04733 61 aa3.15□□□□□ -1.91
TRAF4-213ENST00000578917 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
TRAF4-213ENST00000578917 C1orf64Q8NEQ6 169 aa3.15□□□□□ -1.91
TRAF4-213ENST00000578917 TRAV22A0A0B4J277 110 aa3.14□□□□□ -1.91
TRAF4-213ENST00000578917 SVIPQ8NHG7 77 aa3.14□□□□□ -1.91
TRAF4-213ENST00000578917 UQCRQO14949 82 aa3.13□□□□□ -1.91
TRAF4-213ENST00000578917 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
TRAF4-213ENST00000578917 CYP4F30PQ9H0H9 118 aa3.13□□□□□ -1.91
TRAF4-213ENST00000578917 LOC101927531A0A1B0GV80 90 aa3.12□□□□□ -1.91
TRAF4-213ENST00000578917 ATOX1O00244 68 aa3.12□□□□□ -1.91
TRAF4-213ENST00000578917 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
TRAF4-213ENST00000578917 S4R3F8 94 aa3.12□□□□□ -1.91
TRAF4-213ENST00000578917 A0A087WVE0 104 aa3.11□□□□□ -1.91
TRAF4-213ENST00000578917 FAM236AA0A1B0GUQ0 79 aa3.11□□□□□ -1.91
TRAF4-213ENST00000578917 FAM236BA0A1B0GV22 79 aa3.11□□□□□ -1.91
TRAF4-213ENST00000578917 H0Y9P7 68 aa3.11□□□□□ -1.91
TRAF4-213ENST00000578917 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
TRAF4-213ENST00000578917 SCGB1A1P11684 91 aa3.1□□□□□ -1.91
TRAF4-213ENST00000578917 USH2AO75445 5202 aa3.1□□□□□ -1.91
TRAF4-213ENST00000578917 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
TRAF4-213ENST00000578917 MP68P56378 58 aa3.09□□□□□ -1.91
TRAF4-213ENST00000578917 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms