RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 C20orf166-AS1Q96NR2 134 aa7.66□□□□□ -1.18
MKS1-207ENST00000578789 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
MKS1-207ENST00000578789 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
MKS1-207ENST00000578789 A0A1W2PPM0 123 aa7.64□□□□□ -1.19
MKS1-207ENST00000578789 Q6ZQT0 140 aa7.64□□□□□ -1.19
MKS1-207ENST00000578789 A8MUU9 505 aa7.63□□□□□ -1.19
MKS1-207ENST00000578789 DSCR10P59022 87 aa7.63□□□□□ -1.19
MKS1-207ENST00000578789 PDE6GP18545 87 aa7.62□□□□□ -1.19
MKS1-207ENST00000578789 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
MKS1-207ENST00000578789 A0A1B0GW54 56 aa7.61□□□□□ -1.19
MKS1-207ENST00000578789 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
MKS1-207ENST00000578789 H3BT86 120 aa7.6□□□□□ -1.19
MKS1-207ENST00000578789 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
MKS1-207ENST00000578789 LINC00313P59037 77 aa7.59□□□□□ -1.19
MKS1-207ENST00000578789 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
MKS1-207ENST00000578789 C14orf132Q9NPU4 83 aa7.59□□□□□ -1.19
MKS1-207ENST00000578789 J3KT08 172 aa7.57□□□□□ -1.2
MKS1-207ENST00000578789 NOTCH2NLQ7Z3S9 236 aa7.57□□□□□ -1.2
MKS1-207ENST00000578789 A0A1B0GVX0 72 aa7.56□□□□□ -1.2
MKS1-207ENST00000578789 IGHV6-1A0A0B4J1U7 121 aa7.55□□□□□ -1.2
MKS1-207ENST00000578789 C8orf87E5RJ46 101 aa7.55□□□□□ -1.2
MKS1-207ENST00000578789 MTURNQ8N3F0 131 aa7.55□□□□□ -1.2
MKS1-207ENST00000578789 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
MKS1-207ENST00000578789 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
MKS1-207ENST00000578789 KRTAP9-9Q9BYP9 154 aa7.53□□□□□ -1.2
MKS1-207ENST00000578789 KRTAP9-4Q9BYQ2 154 aa7.53□□□□□ -1.2
MKS1-207ENST00000578789 MT1HP80294 61 aa7.51□□□□□ -1.21
MKS1-207ENST00000578789 A8MWP4 228 aa7.48□□□□□ -1.21
MKS1-207ENST00000578789 NDUFB1O75438 58 aa7.48□□□□□ -1.21
MKS1-207ENST00000578789 NREPQ16612 68 aa7.46□□□□□ -1.22
MKS1-207ENST00000578789 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
MKS1-207ENST00000578789 IGKV3D-7A0A0C4DH55 119 aa7.45□□□□□ -1.22
MKS1-207ENST00000578789 K7EP34 96 aa7.45□□□□□ -1.22
MKS1-207ENST00000578789 PRO0461Q9UI25 63 aa7.44□□□□□ -1.22
MKS1-207ENST00000578789 C8orf17Q9NRJ1 99 aa7.43□□□□□ -1.22
MKS1-207ENST00000578789 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
MKS1-207ENST00000578789 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
MKS1-207ENST00000578789 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
MKS1-207ENST00000578789 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
MKS1-207ENST00000578789 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
MKS1-207ENST00000578789 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
MKS1-207ENST00000578789 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
MKS1-207ENST00000578789 Q6ZVQ6 151 aa7.36□□□□□ -1.23
MKS1-207ENST00000578789 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
MKS1-207ENST00000578789 K7EQZ3 153 aa7.35□□□□□ -1.23
MKS1-207ENST00000578789 BPY2O14599 106 aa7.35□□□□□ -1.23
MKS1-207ENST00000578789 HRES1P13985 223 aa7.34□□□□□ -1.23
MKS1-207ENST00000578789 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
MKS1-207ENST00000578789 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
MKS1-207ENST00000578789 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
MKS1-207ENST00000578789 M0R2T5 61 aa7.33□□□□□ -1.24
MKS1-207ENST00000578789 F8W1H4 67 aa7.31□□□□□ -1.24
MKS1-207ENST00000578789 MRPL34Q9BQ48 92 aaKnown RBP7.31□□□□□ -1.24
MKS1-207ENST00000578789 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
MKS1-207ENST00000578789 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
MKS1-207ENST00000578789 RBM12B-AS1Q9P1G2 102 aa7.28□□□□□ -1.24
MKS1-207ENST00000578789 SPINK7P58062 85 aa7.27□□□□□ -1.25
MKS1-207ENST00000578789 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
MKS1-207ENST00000578789 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
MKS1-207ENST00000578789 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
MKS1-207ENST00000578789 ETDBQ3ZM63 59 aa7.25□□□□□ -1.25
MKS1-207ENST00000578789 Q8N9L7 120 aa7.25□□□□□ -1.25
MKS1-207ENST00000578789 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
MKS1-207ENST00000578789 NDUFS5O43920 106 aa7.21□□□□□ -1.26
MKS1-207ENST00000578789 CASC2Q6XLA1 102 aa7.21□□□□□ -1.26
MKS1-207ENST00000578789 WFDC13Q8IUB5 93 aa7.21□□□□□ -1.26
MKS1-207ENST00000578789 HCG22E2RYF7 251 aa7.16□□□□□ -1.26
MKS1-207ENST00000578789 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
MKS1-207ENST00000578789 CXCL6P80162 114 aa7.15□□□□□ -1.26
MKS1-207ENST00000578789 Q5W150 140 aa7.15□□□□□ -1.26
MKS1-207ENST00000578789 CRCT1Q9UGL9 99 aa7.15□□□□□ -1.26
MKS1-207ENST00000578789 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
MKS1-207ENST00000578789 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
MKS1-207ENST00000578789 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
MKS1-207ENST00000578789 FAM240AA0A1B0GVK7 77 aa7.1□□□□□ -1.27
MKS1-207ENST00000578789 ACYP1P07311 99 aa7.09□□□□□ -1.27
MKS1-207ENST00000578789 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
MKS1-207ENST00000578789 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
MKS1-207ENST00000578789 A0A1B0GV90 55 aa7.04□□□□□ -1.28
MKS1-207ENST00000578789 MT2AP02795 61 aa7.04□□□□□ -1.28
MKS1-207ENST00000578789 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
MKS1-207ENST00000578789 TP53AIP1Q9HCN2 124 aa7.03□□□□□ -1.28
MKS1-207ENST00000578789 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
MKS1-207ENST00000578789 MT1FP04733 61 aa6.99□□□□□ -1.29
MKS1-207ENST00000578789 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
MKS1-207ENST00000578789 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
MKS1-207ENST00000578789 C4orf26Q17RF5 130 aa6.95□□□□□ -1.3
MKS1-207ENST00000578789 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
MKS1-207ENST00000578789 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
MKS1-207ENST00000578789 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
MKS1-207ENST00000578789 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
MKS1-207ENST00000578789 KRTAP9-3Q9BYQ3 159 aa6.9□□□□□ -1.3
MKS1-207ENST00000578789 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
MKS1-207ENST00000578789 USH2AO75445 5202 aa6.89□□□□□ -1.31
MKS1-207ENST00000578789 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
MKS1-207ENST00000578789 A0A087WVE0 104 aa6.86□□□□□ -1.31
MKS1-207ENST00000578789 UQCRQO14949 82 aa6.85□□□□□ -1.31
MKS1-207ENST00000578789 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
MKS1-207ENST00000578789 KRTAP4-2Q9BYR5 136 aa6.85□□□□□ -1.31
MKS1-207ENST00000578789 CYP4F30PQ9H0H9 118 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms