RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 BPY2O14599 106 aa6.25□□□□□ -1.41
CDK5RAP3-210ENST00000578733 Q6ZVQ6 151 aa6.25□□□□□ -1.41
CDK5RAP3-210ENST00000578733 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
CDK5RAP3-210ENST00000578733 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
CDK5RAP3-210ENST00000578733 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
CDK5RAP3-210ENST00000578733 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
CDK5RAP3-210ENST00000578733 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
CDK5RAP3-210ENST00000578733 A8MWP4 228 aa6.22□□□□□ -1.41
CDK5RAP3-210ENST00000578733 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
CDK5RAP3-210ENST00000578733 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
CDK5RAP3-210ENST00000578733 LINC00313P59037 77 aa6.21□□□□□ -1.42
CDK5RAP3-210ENST00000578733 K7ERU9 68 aa6.18□□□□□ -1.42
CDK5RAP3-210ENST00000578733 DSCR10P59022 87 aa6.18□□□□□ -1.42
CDK5RAP3-210ENST00000578733 CXCL6P80162 114 aa6.18□□□□□ -1.42
CDK5RAP3-210ENST00000578733 XP32Q5T750 250 aa6.18□□□□□ -1.42
CDK5RAP3-210ENST00000578733 ATP5EP2Q5VTU8 51 aa6.17□□□□□ -1.42
CDK5RAP3-210ENST00000578733 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
CDK5RAP3-210ENST00000578733 IGKV3D-7A0A0C4DH55 119 aa6.16□□□□□ -1.42
CDK5RAP3-210ENST00000578733 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
CDK5RAP3-210ENST00000578733 K7EQZ3 153 aa6.15□□□□□ -1.42
CDK5RAP3-210ENST00000578733 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-210ENST00000578733 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
CDK5RAP3-210ENST00000578733 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
CDK5RAP3-210ENST00000578733 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
CDK5RAP3-210ENST00000578733 MUC2Q02817 5179 aa6.13□□□□□ -1.43
CDK5RAP3-210ENST00000578733 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
CDK5RAP3-210ENST00000578733 Q75L30 129 aa6.12□□□□□ -1.43
CDK5RAP3-210ENST00000578733 hDV103S1A0JD37 113 aa6.1□□□□□ -1.43
CDK5RAP3-210ENST00000578733 ATP11AUNQ6ZP68 121 aa6.1□□□□□ -1.43
CDK5RAP3-210ENST00000578733 Q8N9L7 120 aa6.1□□□□□ -1.43
CDK5RAP3-210ENST00000578733 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
CDK5RAP3-210ENST00000578733 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
CDK5RAP3-210ENST00000578733 MMP24-AS1A0A0U1RRL7 71 aa6.09□□□□□ -1.43
CDK5RAP3-210ENST00000578733 A8MUU9 505 aa6.09□□□□□ -1.43
CDK5RAP3-210ENST00000578733 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
CDK5RAP3-210ENST00000578733 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
CDK5RAP3-210ENST00000578733 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-210ENST00000578733 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
CDK5RAP3-210ENST00000578733 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
CDK5RAP3-210ENST00000578733 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
CDK5RAP3-210ENST00000578733 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
CDK5RAP3-210ENST00000578733 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
CDK5RAP3-210ENST00000578733 NDUFS5O43920 106 aa6.05□□□□□ -1.44
CDK5RAP3-210ENST00000578733 PCOTHQ58A44 107 aa6.04□□□□□ -1.44
CDK5RAP3-210ENST00000578733 Q8N9P0 234 aaPredicted RBP6.04□□□□□ -1.44
CDK5RAP3-210ENST00000578733 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
CDK5RAP3-210ENST00000578733 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
CDK5RAP3-210ENST00000578733 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
CDK5RAP3-210ENST00000578733 A0A087WVE0 104 aa5.95□□□□□ -1.46
CDK5RAP3-210ENST00000578733 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
CDK5RAP3-210ENST00000578733 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
CDK5RAP3-210ENST00000578733 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
CDK5RAP3-210ENST00000578733 UQCRQO14949 82 aa5.88□□□□□ -1.47
CDK5RAP3-210ENST00000578733 CRCT1Q9UGL9 99 aa5.88□□□□□ -1.47
CDK5RAP3-210ENST00000578733 SPINK7P58062 85 aa5.86□□□□□ -1.47
CDK5RAP3-210ENST00000578733 Q5W150 140 aa5.86□□□□□ -1.47
CDK5RAP3-210ENST00000578733 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
CDK5RAP3-210ENST00000578733 KRTAP4-1Q9BYQ7 146 aa5.86□□□□□ -1.47
CDK5RAP3-210ENST00000578733 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
CDK5RAP3-210ENST00000578733 ATOX1O00244 68 aa5.85□□□□□ -1.47
CDK5RAP3-210ENST00000578733 SMIM20Q8N5G0 67 aa5.85□□□□□ -1.47
CDK5RAP3-210ENST00000578733 IGKV2D-30A0A075B6S6 120 aa5.84□□□□□ -1.47
CDK5RAP3-210ENST00000578733 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
CDK5RAP3-210ENST00000578733 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
CDK5RAP3-210ENST00000578733 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
CDK5RAP3-210ENST00000578733 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
CDK5RAP3-210ENST00000578733 MP68P56378 58 aa5.82□□□□□ -1.48
CDK5RAP3-210ENST00000578733 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
CDK5RAP3-210ENST00000578733 H0Y9P7 68 aa5.81□□□□□ -1.48
CDK5RAP3-210ENST00000578733 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
CDK5RAP3-210ENST00000578733 OCR1Q9BZK8 76 aa5.81□□□□□ -1.48
CDK5RAP3-210ENST00000578733 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
CDK5RAP3-210ENST00000578733 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
CDK5RAP3-210ENST00000578733 FAM236DA0A1B0GTK5 79 aa5.79□□□□□ -1.48
CDK5RAP3-210ENST00000578733 FAM236CP0DP71 79 aa5.79□□□□□ -1.48
CDK5RAP3-210ENST00000578733 HRES1P13985 223 aa5.78□□□□□ -1.48
CDK5RAP3-210ENST00000578733 H3BPC8 53 aa5.77□□□□□ -1.49
CDK5RAP3-210ENST00000578733 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
CDK5RAP3-210ENST00000578733 C1orf64Q8NEQ6 169 aa5.75□□□□□ -1.49
CDK5RAP3-210ENST00000578733 LINC00208Q96KT6 92 aa5.74□□□□□ -1.49
CDK5RAP3-210ENST00000578733 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
CDK5RAP3-210ENST00000578733 CYP4F30PQ9H0H9 118 aa5.73□□□□□ -1.49
CDK5RAP3-210ENST00000578733 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
CDK5RAP3-210ENST00000578733 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
CDK5RAP3-210ENST00000578733 FLGP20930 4061 aaPredicted RBP5.68□□□□□ -1.5
CDK5RAP3-210ENST00000578733 C4orf26Q17RF5 130 aa5.67□□□□□ -1.5
CDK5RAP3-210ENST00000578733 LCE2CQ5TA81 110 aa5.65□□□□□ -1.5
CDK5RAP3-210ENST00000578733 M0R2T5 61 aa5.63□□□□□ -1.51
CDK5RAP3-210ENST00000578733 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
CDK5RAP3-210ENST00000578733 COX7CP15954 63 aa5.61□□□□□ -1.51
CDK5RAP3-210ENST00000578733 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
CDK5RAP3-210ENST00000578733 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
CDK5RAP3-210ENST00000578733 MT1HP80294 61 aa5.6□□□□□ -1.51
CDK5RAP3-210ENST00000578733 KLKP1Q107X0 134 aa5.6□□□□□ -1.51
CDK5RAP3-210ENST00000578733 A8MUN3 132 aa5.59□□□□□ -1.51
CDK5RAP3-210ENST00000578733 SNURFQ9Y675 71 aa5.58□□□□□ -1.52
CDK5RAP3-210ENST00000578733 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
CDK5RAP3-210ENST00000578733 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
CDK5RAP3-210ENST00000578733 NDUFC1O43677 76 aa5.54□□□□□ -1.52
CDK5RAP3-210ENST00000578733 S4R3F8 94 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms