RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
CRLF3-203ENST00000578692 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
CRLF3-203ENST00000578692 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
CRLF3-203ENST00000578692 SCGB1C2P0DMR2 95 aa8.05□□□□□ -1.12
CRLF3-203ENST00000578692 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
CRLF3-203ENST00000578692 IGHV6-1A0A0B4J1U7 121 aa8.03□□□□□ -1.12
CRLF3-203ENST00000578692 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
CRLF3-203ENST00000578692 VPS25Q9BRG1 176 aa8.02□□□□□ -1.13
CRLF3-203ENST00000578692 DSCR8Q96T75 97 aa8.01□□□□□ -1.13
CRLF3-203ENST00000578692 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
CRLF3-203ENST00000578692 FAM236DA0A1B0GTK5 79 aa7.99□□□□□ -1.13
CRLF3-203ENST00000578692 FAM236CP0DP71 79 aa7.99□□□□□ -1.13
CRLF3-203ENST00000578692 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 HRES1P13985 223 aa7.97□□□□□ -1.13
CRLF3-203ENST00000578692 C9JAW5 83 aa7.96□□□□□ -1.14
CRLF3-203ENST00000578692 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
CRLF3-203ENST00000578692 C21orf62-AS1Q17RA5 79 aa7.95□□□□□ -1.14
CRLF3-203ENST00000578692 KRTAP4-2Q9BYR5 136 aa7.94□□□□□ -1.14
CRLF3-203ENST00000578692 J3KT08 172 aa7.93□□□□□ -1.14
CRLF3-203ENST00000578692 Q6ZQT0 140 aa7.92□□□□□ -1.14
CRLF3-203ENST00000578692 KRTAP4-9Q9BYQ8 210 aa7.92□□□□□ -1.14
CRLF3-203ENST00000578692 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
CRLF3-203ENST00000578692 M0R143 59 aa7.88□□□□□ -1.15
CRLF3-203ENST00000578692 NDUFB1O75438 58 aa7.88□□□□□ -1.15
CRLF3-203ENST00000578692 ZCCHC13Q8WW36 166 aaKnown RBP7.88□□□□□ -1.15
CRLF3-203ENST00000578692 JMJD7-PLA2G4BH0Y9G9 81 aa7.87□□□□□ -1.15
CRLF3-203ENST00000578692 MT2AP02795 61 aa7.87□□□□□ -1.15
CRLF3-203ENST00000578692 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
CRLF3-203ENST00000578692 NAA38Q9BRA0 125 aaKnown RBP7.87□□□□□ -1.15
CRLF3-203ENST00000578692 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
CRLF3-203ENST00000578692 A0A1B0GW54 56 aa7.84□□□□□ -1.15
CRLF3-203ENST00000578692 SPINK7P58062 85 aa7.84□□□□□ -1.15
CRLF3-203ENST00000578692 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
CRLF3-203ENST00000578692 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
CRLF3-203ENST00000578692 A8MWP4 228 aa7.82□□□□□ -1.16
CRLF3-203ENST00000578692 TSTD3H0UI37 97 aa7.82□□□□□ -1.16
CRLF3-203ENST00000578692 PDE6GP18545 87 aa7.82□□□□□ -1.16
CRLF3-203ENST00000578692 C8orf17Q9NRJ1 99 aa7.82□□□□□ -1.16
CRLF3-203ENST00000578692 MT1FP04733 61 aa7.81□□□□□ -1.16
CRLF3-203ENST00000578692 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
CRLF3-203ENST00000578692 IGKV3D-7A0A0C4DH55 119 aa7.79□□□□□ -1.16
CRLF3-203ENST00000578692 LYRM7Q5U5X0 104 aa7.79□□□□□ -1.16
CRLF3-203ENST00000578692 C14orf132Q9NPU4 83 aa7.79□□□□□ -1.16
CRLF3-203ENST00000578692 USH2AO75445 5202 aa7.79□□□□□ -1.16
CRLF3-203ENST00000578692 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
CRLF3-203ENST00000578692 BATFQ16520 125 aa7.75□□□□□ -1.17
CRLF3-203ENST00000578692 NREPQ16612 68 aa7.75□□□□□ -1.17
CRLF3-203ENST00000578692 Q6ZVQ6 151 aa7.75□□□□□ -1.17
CRLF3-203ENST00000578692 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
CRLF3-203ENST00000578692 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
CRLF3-203ENST00000578692 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.17
CRLF3-203ENST00000578692 TAX1BP3O14907 124 aa7.71□□□□□ -1.18
CRLF3-203ENST00000578692 C9orf118A6NHY6 69 aa7.69□□□□□ -1.18
CRLF3-203ENST00000578692 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
CRLF3-203ENST00000578692 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
CRLF3-203ENST00000578692 TMEM254Q8TBM7 123 aa7.68□□□□□ -1.18
CRLF3-203ENST00000578692 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
CRLF3-203ENST00000578692 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
CRLF3-203ENST00000578692 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
CRLF3-203ENST00000578692 H3BT86 120 aa7.63□□□□□ -1.19
CRLF3-203ENST00000578692 K7EQZ3 153 aa7.63□□□□□ -1.19
CRLF3-203ENST00000578692 NDUFS5O43920 106 aa7.62□□□□□ -1.19
CRLF3-203ENST00000578692 KRTAP5-3Q6L8H2 238 aa7.59□□□□□ -1.19
CRLF3-203ENST00000578692 FCGBPQ9Y6R7 5405 aaPredicted RBP7.59□□□□□ -1.19
CRLF3-203ENST00000578692 BPY2O14599 106 aa7.59□□□□□ -1.2
CRLF3-203ENST00000578692 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
CRLF3-203ENST00000578692 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
CRLF3-203ENST00000578692 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
CRLF3-203ENST00000578692 Q5W150 140 aa7.54□□□□□ -1.2
CRLF3-203ENST00000578692 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
CRLF3-203ENST00000578692 KRTAP4-11Q9BYQ6 195 aa7.52□□□□□ -1.21
CRLF3-203ENST00000578692 LINC00846Q9NV44 126 aa7.52□□□□□ -1.21
CRLF3-203ENST00000578692 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
CRLF3-203ENST00000578692 COL5A1-AS1Q5SY13 56 aa7.5□□□□□ -1.21
CRLF3-203ENST00000578692 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
CRLF3-203ENST00000578692 Q8N9L7 120 aa7.5□□□□□ -1.21
CRLF3-203ENST00000578692 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
CRLF3-203ENST00000578692 PRO0461Q9UI25 63 aa7.49□□□□□ -1.21
CRLF3-203ENST00000578692 HCG22E2RYF7 251 aa7.47□□□□□ -1.21
CRLF3-203ENST00000578692 K7EP34 96 aa7.46□□□□□ -1.22
CRLF3-203ENST00000578692 CXCL6P80162 114 aa7.43□□□□□ -1.22
CRLF3-203ENST00000578692 C4orf26Q17RF5 130 aa7.43□□□□□ -1.22
CRLF3-203ENST00000578692 MACF1Q9UPN3 7388 aaKnown RBP7.42□□□□□ -1.22
CRLF3-203ENST00000578692 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
CRLF3-203ENST00000578692 PCP4L1A6NKN8 68 aa7.37□□□□□ -1.23
CRLF3-203ENST00000578692 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
CRLF3-203ENST00000578692 C5orf47Q569G3 176 aa7.32□□□□□ -1.24
CRLF3-203ENST00000578692 GTF2H5Q6ZYL4 71 aa7.31□□□□□ -1.24
CRLF3-203ENST00000578692 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
CRLF3-203ENST00000578692 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
CRLF3-203ENST00000578692 S4R3F8 94 aa7.27□□□□□ -1.25
CRLF3-203ENST00000578692 FAM236AA0A1B0GUQ0 79 aa7.26□□□□□ -1.25
CRLF3-203ENST00000578692 FAM236BA0A1B0GV22 79 aa7.26□□□□□ -1.25
CRLF3-203ENST00000578692 F8W1H4 67 aa7.26□□□□□ -1.25
CRLF3-203ENST00000578692 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
CRLF3-203ENST00000578692 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms