RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TMEM256-PLSCR3K7ERE1 68 aa5.51□□□□□ -1.53
CTDNEP1-212ENST00000576613 TRIAP1O43715 76 aa5.5□□□□□ -1.53
CTDNEP1-212ENST00000576613 J3KT08 172 aa5.49□□□□□ -1.53
CTDNEP1-212ENST00000576613 LYRM7Q5U5X0 104 aa5.49□□□□□ -1.53
CTDNEP1-212ENST00000576613 CEND1Q8N111 149 aa5.48□□□□□ -1.53
CTDNEP1-212ENST00000576613 C14orf144Q96I85 54 aa5.48□□□□□ -1.53
CTDNEP1-212ENST00000576613 VPS25Q9BRG1 176 aa5.48□□□□□ -1.53
CTDNEP1-212ENST00000576613 S100A6P06703 90 aa5.47□□□□□ -1.53
CTDNEP1-212ENST00000576613 NDUFB1O75438 58 aa5.46□□□□□ -1.54
CTDNEP1-212ENST00000576613 UBE2V1Q13404 147 aa5.46□□□□□ -1.54
CTDNEP1-212ENST00000576613 PSMB2P49721 201 aa5.45□□□□□ -1.54
CTDNEP1-212ENST00000576613 C21orf62-AS1Q17RA5 79 aa5.45□□□□□ -1.54
CTDNEP1-212ENST00000576613 C2orf91Q6ZV80 131 aa5.45□□□□□ -1.54
CTDNEP1-212ENST00000576613 DSCR8Q96T75 97 aa5.45□□□□□ -1.54
CTDNEP1-212ENST00000576613 COX6CP09669 75 aa5.44□□□□□ -1.54
CTDNEP1-212ENST00000576613 RBM3P98179 157 aaKnown RBP5.43□□□□□ -1.54
CTDNEP1-212ENST00000576613 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
CTDNEP1-212ENST00000576613 SPATA45Q537H7 98 aa5.43□□□□□ -1.54
CTDNEP1-212ENST00000576613 PAM16Q9Y3D7 125 aa5.43□□□□□ -1.54
CTDNEP1-212ENST00000576613 NEBP20929 6669 aa5.43□□□□□ -1.54
CTDNEP1-212ENST00000576613 FXYD2P54710 66 aa5.42□□□□□ -1.54
CTDNEP1-212ENST00000576613 IGKV3D-7A0A0C4DH55 119 aa5.41□□□□□ -1.54
CTDNEP1-212ENST00000576613 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
CTDNEP1-212ENST00000576613 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
CTDNEP1-212ENST00000576613 A6NN06 94 aa5.39□□□□□ -1.55
CTDNEP1-212ENST00000576613 Q6ZQT0 140 aa5.39□□□□□ -1.55
CTDNEP1-212ENST00000576613 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
CTDNEP1-212ENST00000576613 C9JAW5 83 aa5.38□□□□□ -1.55
CTDNEP1-212ENST00000576613 S100A1P23297 94 aa5.38□□□□□ -1.55
CTDNEP1-212ENST00000576613 Q6ZVQ6 151 aa5.37□□□□□ -1.55
CTDNEP1-212ENST00000576613 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
CTDNEP1-212ENST00000576613 K7ERJ3 54 aa5.36□□□□□ -1.55
CTDNEP1-212ENST00000576613 HSD52Q0P140 79 aa5.33□□□□□ -1.56
CTDNEP1-212ENST00000576613 A0A1B0GW54 56 aa5.32□□□□□ -1.56
CTDNEP1-212ENST00000576613 SCGB1C2P0DMR2 95 aa5.31□□□□□ -1.56
CTDNEP1-212ENST00000576613 Q5VV11 94 aa5.31□□□□□ -1.56
CTDNEP1-212ENST00000576613 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
CTDNEP1-212ENST00000576613 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-212ENST00000576613 FAM236AA0A1B0GUQ0 79 aa5.3□□□□□ -1.56
CTDNEP1-212ENST00000576613 FAM236BA0A1B0GV22 79 aa5.3□□□□□ -1.56
CTDNEP1-212ENST00000576613 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
CTDNEP1-212ENST00000576613 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
CTDNEP1-212ENST00000576613 NDUFS5O43920 106 aa5.29□□□□□ -1.56
CTDNEP1-212ENST00000576613 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
CTDNEP1-212ENST00000576613 IGKV2-30P06310 120 aa5.28□□□□□ -1.56
CTDNEP1-212ENST00000576613 MT1BP07438 61 aa5.28□□□□□ -1.56
CTDNEP1-212ENST00000576613 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
CTDNEP1-212ENST00000576613 MMP24-AS1A0A0U1RRL7 71 aa5.27□□□□□ -1.57
CTDNEP1-212ENST00000576613 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
CTDNEP1-212ENST00000576613 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
CTDNEP1-212ENST00000576613 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
CTDNEP1-212ENST00000576613 PDE6GP18545 87 aa5.26□□□□□ -1.57
CTDNEP1-212ENST00000576613 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
CTDNEP1-212ENST00000576613 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
CTDNEP1-212ENST00000576613 NREPQ16612 68 aa5.24□□□□□ -1.57
CTDNEP1-212ENST00000576613 C5orf47Q569G3 176 aa5.24□□□□□ -1.57
CTDNEP1-212ENST00000576613 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
CTDNEP1-212ENST00000576613 SPRR2GQ9BYE4 73 aa5.23□□□□□ -1.57
CTDNEP1-212ENST00000576613 C4orf26Q17RF5 130 aa5.22□□□□□ -1.57
CTDNEP1-212ENST00000576613 K7EQZ3 153 aa5.2□□□□□ -1.58
CTDNEP1-212ENST00000576613 ATXN8Q156A1 80 aa5.2□□□□□ -1.58
CTDNEP1-212ENST00000576613 KMT2DO14686 5537 aa5.2□□□□□ -1.58
CTDNEP1-212ENST00000576613 Q5W150 140 aa5.19□□□□□ -1.58
CTDNEP1-212ENST00000576613 C14orf132Q9NPU4 83 aa5.19□□□□□ -1.58
CTDNEP1-212ENST00000576613 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
CTDNEP1-212ENST00000576613 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
CTDNEP1-212ENST00000576613 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
CTDNEP1-212ENST00000576613 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
CTDNEP1-212ENST00000576613 UQCR10Q9UDW1 63 aa5.17□□□□□ -1.58
CTDNEP1-212ENST00000576613 S4R3F8 94 aa5.17□□□□□ -1.58
CTDNEP1-212ENST00000576613 IMUPQ9GZP8 106 aa5.15□□□□□ -1.59
CTDNEP1-212ENST00000576613 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
CTDNEP1-212ENST00000576613 PYY3Q5JQD4 70 aa5.13□□□□□ -1.59
CTDNEP1-212ENST00000576613 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
CTDNEP1-212ENST00000576613 BPY2O14599 106 aa5.12□□□□□ -1.59
CTDNEP1-212ENST00000576613 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
CTDNEP1-212ENST00000576613 CXCL6P80162 114 aa5.11□□□□□ -1.59
CTDNEP1-212ENST00000576613 LCA10Q71F78 164 aa5.11□□□□□ -1.59
CTDNEP1-212ENST00000576613 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
CTDNEP1-212ENST00000576613 C1orf64Q8NEQ6 169 aa5.08□□□□□ -1.6
CTDNEP1-212ENST00000576613 NAA38Q9BRA0 125 aaKnown RBP5.08□□□□□ -1.6
CTDNEP1-212ENST00000576613 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
CTDNEP1-212ENST00000576613 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
CTDNEP1-212ENST00000576613 SPRR2EP22531 72 aa5.05□□□□□ -1.6
CTDNEP1-212ENST00000576613 SPRR2BP35325 72 aa5.05□□□□□ -1.6
CTDNEP1-212ENST00000576613 SPRR2AP35326 72 aa5.05□□□□□ -1.6
CTDNEP1-212ENST00000576613 Q8N9L7 120 aa5.05□□□□□ -1.6
CTDNEP1-212ENST00000576613 M0R143 59 aa5.04□□□□□ -1.6
CTDNEP1-212ENST00000576613 SMCPP49901 116 aaPredicted RBP5.04□□□□□ -1.6
CTDNEP1-212ENST00000576613 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
CTDNEP1-212ENST00000576613 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
CTDNEP1-212ENST00000576613 H3BT86 120 aa4.98□□□□□ -1.61
CTDNEP1-212ENST00000576613 KRTAP3-3Q9BYR6 98 aa4.98□□□□□ -1.61
CTDNEP1-212ENST00000576613 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
CTDNEP1-212ENST00000576613 TMA7Q9Y2S6 64 aaKnown RBP4.98□□□□□ -1.61
CTDNEP1-212ENST00000576613 TSTD3H0UI37 97 aa4.97□□□□□ -1.61
CTDNEP1-212ENST00000576613 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
CTDNEP1-212ENST00000576613 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
CTDNEP1-212ENST00000576613 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
CTDNEP1-212ENST00000576613 UBL5Q9BZL1 73 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 319.6 ms