RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 A0A1B0GW54 56 aa10.86□□□□□ -0.67
HCFC1R1-208ENST00000575214 LCE2CQ5TA81 110 aa10.86□□□□□ -0.67
HCFC1R1-208ENST00000575214 NOTCH2NLQ7Z3S9 236 aa10.86□□□□□ -0.67
HCFC1R1-208ENST00000575214 J3KT08 172 aa10.85□□□□□ -0.67
HCFC1R1-208ENST00000575214 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
HCFC1R1-208ENST00000575214 KRTAP16-1A8MUX0 517 aa10.84□□□□□ -0.67
HCFC1R1-208ENST00000575214 KRTAP9-2Q9BYQ4 174 aa10.83□□□□□ -0.68
HCFC1R1-208ENST00000575214 SPCS1Q9Y6A9 102 aa10.83□□□□□ -0.68
HCFC1R1-208ENST00000575214 COL5A1-AS1Q5SY13 56 aa10.82□□□□□ -0.68
HCFC1R1-208ENST00000575214 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
HCFC1R1-208ENST00000575214 COX6B2Q6YFQ2 88 aa10.78□□□□□ -0.68
HCFC1R1-208ENST00000575214 NDUFB1O75438 58 aa10.77□□□□□ -0.68
HCFC1R1-208ENST00000575214 MT1HP80294 61 aa10.75□□□□□ -0.69
HCFC1R1-208ENST00000575214 NREPQ16612 68 aa10.75□□□□□ -0.69
HCFC1R1-208ENST00000575214 A8MWP4 228 aa10.73□□□□□ -0.69
HCFC1R1-208ENST00000575214 PCP4L1A6NKN8 68 aa10.72□□□□□ -0.69
HCFC1R1-208ENST00000575214 IGKV3D-7A0A0C4DH55 119 aa10.68□□□□□ -0.7
HCFC1R1-208ENST00000575214 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
HCFC1R1-208ENST00000575214 K7EP34 96 aa10.67□□□□□ -0.7
HCFC1R1-208ENST00000575214 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
HCFC1R1-208ENST00000575214 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
HCFC1R1-208ENST00000575214 PRO0461Q9UI25 63 aa10.63□□□□□ -0.71
HCFC1R1-208ENST00000575214 M0R2T5 61 aa10.62□□□□□ -0.71
HCFC1R1-208ENST00000575214 Q8N9P0 234 aaPredicted RBP10.59□□□□□ -0.71
HCFC1R1-208ENST00000575214 ZCCHC13Q8WW36 166 aaKnown RBP10.59□□□□□ -0.71
HCFC1R1-208ENST00000575214 Q6ZVQ6 151 aa10.58□□□□□ -0.72
HCFC1R1-208ENST00000575214 GTF2H5Q6ZYL4 71 aa10.58□□□□□ -0.72
HCFC1R1-208ENST00000575214 FLGP20930 4061 aaPredicted RBP10.58□□□□□ -0.72
HCFC1R1-208ENST00000575214 BPY2O14599 106 aa10.57□□□□□ -0.72
HCFC1R1-208ENST00000575214 K7EQZ3 153 aa10.55□□□□□ -0.72
HCFC1R1-208ENST00000575214 MMP24-AS1A0A0U1RRL7 71 aa10.53□□□□□ -0.72
HCFC1R1-208ENST00000575214 KRTAP10-6P60371 365 aaPredicted RBP10.52□□□□□ -0.73
HCFC1R1-208ENST00000575214 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
HCFC1R1-208ENST00000575214 MRPL34Q9BQ48 92 aaKnown RBP10.51□□□□□ -0.73
HCFC1R1-208ENST00000575214 FAM236DA0A1B0GTK5 79 aa10.5□□□□□ -0.73
HCFC1R1-208ENST00000575214 FAM236CP0DP71 79 aa10.5□□□□□ -0.73
HCFC1R1-208ENST00000575214 HRES1P13985 223 aa10.5□□□□□ -0.73
HCFC1R1-208ENST00000575214 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
HCFC1R1-208ENST00000575214 hDV103S1A0JD37 113 aa10.49□□□□□ -0.73
HCFC1R1-208ENST00000575214 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
HCFC1R1-208ENST00000575214 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
HCFC1R1-208ENST00000575214 F8W1H4 67 aa10.47□□□□□ -0.73
HCFC1R1-208ENST00000575214 UBL5Q9BZL1 73 aa10.47□□□□□ -0.73
HCFC1R1-208ENST00000575214 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
HCFC1R1-208ENST00000575214 KRTAP9-6A0A140TA67 174 aa10.46□□□□□ -0.74
HCFC1R1-208ENST00000575214 SPINK7P58062 85 aa10.45□□□□□ -0.74
HCFC1R1-208ENST00000575214 Q8N9L7 120 aa10.45□□□□□ -0.74
HCFC1R1-208ENST00000575214 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
HCFC1R1-208ENST00000575214 NDUFS5O43920 106 aa10.44□□□□□ -0.74
HCFC1R1-208ENST00000575214 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
HCFC1R1-208ENST00000575214 WFDC13Q8IUB5 93 aa10.39□□□□□ -0.75
HCFC1R1-208ENST00000575214 CASC2Q6XLA1 102 aa10.37□□□□□ -0.75
HCFC1R1-208ENST00000575214 HCG22E2RYF7 251 aa10.3□□□□□ -0.76
HCFC1R1-208ENST00000575214 FSIP2Q5CZC0 6907 aa10.29□□□□□ -0.76
HCFC1R1-208ENST00000575214 Q5W150 140 aa10.26□□□□□ -0.77
HCFC1R1-208ENST00000575214 IGKV2D-30A0A075B6S6 120 aa10.23□□□□□ -0.77
HCFC1R1-208ENST00000575214 IGKV2-30P06310 120 aa10.23□□□□□ -0.77
HCFC1R1-208ENST00000575214 CXCL6P80162 114 aa10.23□□□□□ -0.77
HCFC1R1-208ENST00000575214 CRCT1Q9UGL9 99 aa10.23□□□□□ -0.77
HCFC1R1-208ENST00000575214 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
HCFC1R1-208ENST00000575214 KRTAP9-8Q9BYQ0 159 aa10.18□□□□□ -0.78
HCFC1R1-208ENST00000575214 ACYP1P07311 99 aa10.16□□□□□ -0.78
HCFC1R1-208ENST00000575214 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
HCFC1R1-208ENST00000575214 A0A1B0GV90 55 aa10.12□□□□□ -0.79
HCFC1R1-208ENST00000575214 MT2AP02795 61 aa10.07□□□□□ -0.8
HCFC1R1-208ENST00000575214 TP53AIP1Q9HCN2 124 aa10.07□□□□□ -0.8
HCFC1R1-208ENST00000575214 H1FX-AS1Q4G0G2 97 aa10.06□□□□□ -0.8
HCFC1R1-208ENST00000575214 ATP5EP2Q5VTU8 51 aa10.05□□□□□ -0.8
HCFC1R1-208ENST00000575214 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
HCFC1R1-208ENST00000575214 MT1FP04733 61 aa10□□□□□ -0.81
HCFC1R1-208ENST00000575214 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
HCFC1R1-208ENST00000575214 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
HCFC1R1-208ENST00000575214 LINC00643Q86TS7 51 aa9.93□□□□□ -0.82
HCFC1R1-208ENST00000575214 TRAV22A0A0B4J277 110 aa9.88□□□□□ -0.83
HCFC1R1-208ENST00000575214 A0A087WVE0 104 aa9.87□□□□□ -0.83
HCFC1R1-208ENST00000575214 C1orf64Q8NEQ6 169 aa9.86□□□□□ -0.83
HCFC1R1-208ENST00000575214 KRTAP9-3Q9BYQ3 159 aa9.86□□□□□ -0.83
HCFC1R1-208ENST00000575214 J3QR89 54 aa9.83□□□□□ -0.84
HCFC1R1-208ENST00000575214 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
HCFC1R1-208ENST00000575214 CYP4F30PQ9H0H9 118 aa9.83□□□□□ -0.84
HCFC1R1-208ENST00000575214 UQCRQO14949 82 aa9.82□□□□□ -0.84
HCFC1R1-208ENST00000575214 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
HCFC1R1-208ENST00000575214 USH2AO75445 5202 aa9.81□□□□□ -0.84
HCFC1R1-208ENST00000575214 S4R3F8 94 aa9.78□□□□□ -0.84
HCFC1R1-208ENST00000575214 LCE2BO14633 110 aa9.77□□□□□ -0.84
HCFC1R1-208ENST00000575214 H0Y9P7 68 aa9.76□□□□□ -0.85
HCFC1R1-208ENST00000575214 C5orf47Q569G3 176 aa9.75□□□□□ -0.85
HCFC1R1-208ENST00000575214 ATOX1O00244 68 aa9.75□□□□□ -0.85
HCFC1R1-208ENST00000575214 LCA10Q71F78 164 aa9.69□□□□□ -0.86
HCFC1R1-208ENST00000575214 SSPOA2VEC9 5147 aa9.68□□□□□ -0.86
HCFC1R1-208ENST00000575214 CSAG1Q6PB30 78 aa9.66□□□□□ -0.86
HCFC1R1-208ENST00000575214 OCR1Q9BZK8 76 aa9.64□□□□□ -0.87
HCFC1R1-208ENST00000575214 LINC00208Q96KT6 92 aa9.63□□□□□ -0.87
HCFC1R1-208ENST00000575214 MP68P56378 58 aa9.62□□□□□ -0.87
HCFC1R1-208ENST00000575214 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
HCFC1R1-208ENST00000575214 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
HCFC1R1-208ENST00000575214 SCGB1A1P11684 91 aa9.56□□□□□ -0.88
HCFC1R1-208ENST00000575214 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
HCFC1R1-208ENST00000575214 KLKP1Q107X0 134 aa9.54□□□□□ -0.88
HCFC1R1-208ENST00000575214 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms