RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 SEC61BP60468 96 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-218ENST00000574964 Q6ZVQ6 151 aa7.9□□□□□ -1.14
NPLOC4-218ENST00000574964 BPY2O14599 106 aa7.89□□□□□ -1.15
NPLOC4-218ENST00000574964 A8MWP4 228 aa7.88□□□□□ -1.15
NPLOC4-218ENST00000574964 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
NPLOC4-218ENST00000574964 C8orf87E5RJ46 101 aa7.87□□□□□ -1.15
NPLOC4-218ENST00000574964 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
NPLOC4-218ENST00000574964 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
NPLOC4-218ENST00000574964 ACYP1P07311 99 aa7.83□□□□□ -1.16
NPLOC4-218ENST00000574964 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
NPLOC4-218ENST00000574964 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
NPLOC4-218ENST00000574964 PCOTHQ58A44 107 aa7.81□□□□□ -1.16
NPLOC4-218ENST00000574964 Q75L30 129 aa7.81□□□□□ -1.16
NPLOC4-218ENST00000574964 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
NPLOC4-218ENST00000574964 K7EQZ3 153 aa7.79□□□□□ -1.16
NPLOC4-218ENST00000574964 ATP11AUNQ6ZP68 121 aa7.79□□□□□ -1.16
NPLOC4-218ENST00000574964 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
NPLOC4-218ENST00000574964 A8MUU9 505 aa7.78□□□□□ -1.16
NPLOC4-218ENST00000574964 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
NPLOC4-218ENST00000574964 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
NPLOC4-218ENST00000574964 J3QR89 54 aa7.77□□□□□ -1.17
NPLOC4-218ENST00000574964 UBR4Q5T4S7 5183 aa7.77□□□□□ -1.17
NPLOC4-218ENST00000574964 MUC17Q685J3 4493 aa7.76□□□□□ -1.17
NPLOC4-218ENST00000574964 Q8N9L7 120 aa7.75□□□□□ -1.17
NPLOC4-218ENST00000574964 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
NPLOC4-218ENST00000574964 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
NPLOC4-218ENST00000574964 CXCL6P80162 114 aa7.72□□□□□ -1.17
NPLOC4-218ENST00000574964 TMEM254Q8TBM7 123 aa7.71□□□□□ -1.18
NPLOC4-218ENST00000574964 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
NPLOC4-218ENST00000574964 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
NPLOC4-218ENST00000574964 NDUFS5O43920 106 aa7.68□□□□□ -1.18
NPLOC4-218ENST00000574964 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
NPLOC4-218ENST00000574964 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-218ENST00000574964 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
NPLOC4-218ENST00000574964 KRTAP4-1Q9BYQ7 146 aa7.67□□□□□ -1.18
NPLOC4-218ENST00000574964 LINC00643Q86TS7 51 aa7.66□□□□□ -1.18
NPLOC4-218ENST00000574964 A0A0U1RQV1 116 aa7.65□□□□□ -1.18
NPLOC4-218ENST00000574964 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
NPLOC4-218ENST00000574964 HIST1H4AP62805 103 aaKnown RBP7.63□□□□□ -1.19
NPLOC4-218ENST00000574964 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
NPLOC4-218ENST00000574964 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
NPLOC4-218ENST00000574964 K7ERU9 68 aa7.62□□□□□ -1.19
NPLOC4-218ENST00000574964 MUC2Q02817 5179 aa7.5□□□□□ -1.21
NPLOC4-218ENST00000574964 A0A087WVE0 104 aa7.5□□□□□ -1.21
NPLOC4-218ENST00000574964 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
NPLOC4-218ENST00000574964 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
NPLOC4-218ENST00000574964 SPINK7P58062 85 aa7.49□□□□□ -1.21
NPLOC4-218ENST00000574964 Q5W150 140 aa7.47□□□□□ -1.21
NPLOC4-218ENST00000574964 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
NPLOC4-218ENST00000574964 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
NPLOC4-218ENST00000574964 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
NPLOC4-218ENST00000574964 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
NPLOC4-218ENST00000574964 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
NPLOC4-218ENST00000574964 HRES1P13985 223 aa7.42□□□□□ -1.22
NPLOC4-218ENST00000574964 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
NPLOC4-218ENST00000574964 MT-ATP8P03928 68 aa7.41□□□□□ -1.22
NPLOC4-218ENST00000574964 KRTAP19-2Q3LHN2 52 aa7.4□□□□□ -1.22
NPLOC4-218ENST00000574964 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
NPLOC4-218ENST00000574964 UQCRQO14949 82 aa7.39□□□□□ -1.23
NPLOC4-218ENST00000574964 SCGB1A1P11684 91 aa7.38□□□□□ -1.23
NPLOC4-218ENST00000574964 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
NPLOC4-218ENST00000574964 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
NPLOC4-218ENST00000574964 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
NPLOC4-218ENST00000574964 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
NPLOC4-218ENST00000574964 H0Y9P7 68 aa7.33□□□□□ -1.24
NPLOC4-218ENST00000574964 ATOX1O00244 68 aa7.31□□□□□ -1.24
NPLOC4-218ENST00000574964 PCP4P48539 62 aa7.31□□□□□ -1.24
NPLOC4-218ENST00000574964 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-218ENST00000574964 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
NPLOC4-218ENST00000574964 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
NPLOC4-218ENST00000574964 M0R2T5 61 aa7.29□□□□□ -1.24
NPLOC4-218ENST00000574964 MP68P56378 58 aa7.29□□□□□ -1.24
NPLOC4-218ENST00000574964 MT1HP80294 61 aa7.29□□□□□ -1.24
NPLOC4-218ENST00000574964 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
NPLOC4-218ENST00000574964 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
NPLOC4-218ENST00000574964 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
NPLOC4-218ENST00000574964 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
NPLOC4-218ENST00000574964 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
NPLOC4-218ENST00000574964 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
NPLOC4-218ENST00000574964 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
NPLOC4-218ENST00000574964 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
NPLOC4-218ENST00000574964 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
NPLOC4-218ENST00000574964 TRAV7A0A075B6U4 112 aa7.19□□□□□ -1.26
NPLOC4-218ENST00000574964 H3BPC8 53 aa7.19□□□□□ -1.26
NPLOC4-218ENST00000574964 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
NPLOC4-218ENST00000574964 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-218ENST00000574964 KLKP1Q107X0 134 aa7.11□□□□□ -1.27
NPLOC4-218ENST00000574964 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
NPLOC4-218ENST00000574964 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
NPLOC4-218ENST00000574964 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-218ENST00000574964 S4R3F8 94 aa7.05□□□□□ -1.28
NPLOC4-218ENST00000574964 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
NPLOC4-218ENST00000574964 A8MUN3 132 aa7.01□□□□□ -1.29
NPLOC4-218ENST00000574964 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
NPLOC4-218ENST00000574964 LCA10Q71F78 164 aa6.97□□□□□ -1.29
NPLOC4-218ENST00000574964 COX7CP15954 63 aa6.96□□□□□ -1.3
NPLOC4-218ENST00000574964 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
NPLOC4-218ENST00000574964 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
NPLOC4-218ENST00000574964 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
NPLOC4-218ENST00000574964 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms