RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 DEFB105AQ8NG35 78 aa2.58□□□□□ -2
PRPF8-211ENST00000574728 VAMP8Q9BV40 100 aa2.58□□□□□ -2
PRPF8-211ENST00000574728 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
PRPF8-211ENST00000574728 ASB16-AS1Q495Z4 193 aa2.57□□□□□ -2
PRPF8-211ENST00000574728 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
PRPF8-211ENST00000574728 Q6ZQY7 126 aa2.57□□□□□ -2
PRPF8-211ENST00000574728 LAMTOR3Q9UHA4 124 aa2.57□□□□□ -2
PRPF8-211ENST00000574728 A0A1B0GX51 115 aa2.56□□□□□ -2
PRPF8-211ENST00000574728 hADV29S1A0JD25 119 aa2.56□□□□□ -2
PRPF8-211ENST00000574728 KRTAP19-2Q3LHN2 52 aa2.56□□□□□ -2
PRPF8-211ENST00000574728 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.56□□□□□ -2
PRPF8-211ENST00000574728 PRO1933Q9H354 126 aa2.56□□□□□ -2
PRPF8-211ENST00000574728 FAM240AA0A1B0GVK7 77 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 H7C2G1 150 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 J3KT08 172 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 K7ERJ3 54 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 IGFL1Q6UW32 110 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 HRCT1Q6UXD1 115 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
PRPF8-211ENST00000574728 NHP2Q9NX24 153 aaKnown RBP2.55□□□□□ -2
PRPF8-211ENST00000574728 A0A0U1RQV1 116 aa2.54□□□□□ -2
PRPF8-211ENST00000574728 HSD52Q0P140 79 aa2.54□□□□□ -2
PRPF8-211ENST00000574728 BVES-AS1Q5T3Y7 98 aa2.54□□□□□ -2
PRPF8-211ENST00000574728 PRO1854Q9UHT4 67 aa2.54□□□□□ -2
PRPF8-211ENST00000574728 H0YGX0 51 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 H3BUT2 72 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 COL5A1-AS1Q5SY13 56 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 PPDPFLQ8WWR9 84 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 CLEC2BQ92478 149 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 RAB37Q96AX2 223 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 LIMD2Q9BT23 127 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
PRPF8-211ENST00000574728 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 BATFQ16520 125 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 Q6JHZ5 121 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 Q6Q795 121 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 UQCR10Q9UDW1 63 aa2.52□□□□□ -2.01
PRPF8-211ENST00000574728 A0A1W2PNM2 257 aa2.51□□□□□ -2.01
PRPF8-211ENST00000574728 C9orf92A6NGG3 77 aa2.51□□□□□ -2.01
PRPF8-211ENST00000574728 Q96NJ1 140 aa2.51□□□□□ -2.01
PRPF8-211ENST00000574728 FAM236DA0A1B0GTK5 79 aa2.5□□□□□ -2.01
PRPF8-211ENST00000574728 C9JAW5 83 aa2.5□□□□□ -2.01
PRPF8-211ENST00000574728 FAM236CP0DP71 79 aa2.5□□□□□ -2.01
PRPF8-211ENST00000574728 PCOTHQ58A44 107 aa2.5□□□□□ -2.01
PRPF8-211ENST00000574728 F8WEM9 126 aa2.49□□□□□ -2.01
PRPF8-211ENST00000574728 J3QR89 54 aa2.49□□□□□ -2.01
PRPF8-211ENST00000574728 LST1O00453 97 aa2.49□□□□□ -2.01
PRPF8-211ENST00000574728 TCL1BO95988 128 aa2.49□□□□□ -2.01
PRPF8-211ENST00000574728 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
PRPF8-211ENST00000574728 ANAPC13Q9BS18 74 aa2.49□□□□□ -2.01
PRPF8-211ENST00000574728 H3BMG7 143 aa2.48□□□□□ -2.01
PRPF8-211ENST00000574728 TRACP01848 142 aa2.48□□□□□ -2.01
PRPF8-211ENST00000574728 GTF2H5Q6ZYL4 71 aa2.48□□□□□ -2.01
PRPF8-211ENST00000574728 TEN1Q86WV5 123 aa2.48□□□□□ -2.01
PRPF8-211ENST00000574728 TRBV7-4A0A0J9YYF1 115 aa2.47□□□□□ -2.01
PRPF8-211ENST00000574728 LINC00472Q9H8W2 130 aa2.47□□□□□ -2.01
PRPF8-211ENST00000574728 A0A087WSZ3 146 aa2.46□□□□□ -2.02
PRPF8-211ENST00000574728 FABP2P12104 132 aa2.46□□□□□ -2.02
PRPF8-211ENST00000574728 MT1HP80294 61 aa2.46□□□□□ -2.02
PRPF8-211ENST00000574728 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
PRPF8-211ENST00000574728 NAA38Q9BRA0 125 aaKnown RBP2.46□□□□□ -2.02
PRPF8-211ENST00000574728 ORMDL1Q9P0S3 153 aa2.46□□□□□ -2.02
PRPF8-211ENST00000574728 A8MUU9 505 aa2.45□□□□□ -2.02
PRPF8-211ENST00000574728 PSMB2P49721 201 aa2.45□□□□□ -2.02
PRPF8-211ENST00000574728 ANKRD29Q8N6D5 301 aa2.45□□□□□ -2.02
PRPF8-211ENST00000574728 OBSCN-AS1Q96MR7 158 aa2.45□□□□□ -2.02
PRPF8-211ENST00000574728 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 H3BQ85 93 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 TMEM256-PLSCR3K7ERE1 68 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 SNCGO76070 127 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 DEFB116Q30KQ4 102 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 USH2AO75445 5202 aa2.44□□□□□ -2.02
PRPF8-211ENST00000574728 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 TAX1BP3O14907 124 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 CCKP06307 115 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 COX6CP09669 75 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 LYRM7Q5U5X0 104 aa2.43□□□□□ -2.02
PRPF8-211ENST00000574728 NDUFS5O43920 106 aa2.42□□□□□ -2.02
PRPF8-211ENST00000574728 DNAL4O96015 105 aa2.42□□□□□ -2.02
PRPF8-211ENST00000574728 Q6ZQT0 140 aa2.42□□□□□ -2.02
PRPF8-211ENST00000574728 LOC110117498A0A087WWA1 95 aa2.41□□□□□ -2.02
PRPF8-211ENST00000574728 SCGB1C2P0DMR2 95 aa2.41□□□□□ -2.02
PRPF8-211ENST00000574728 RBM3P98179 157 aaKnown RBP2.41□□□□□ -2.02
PRPF8-211ENST00000574728 ATXN8Q156A1 80 aa2.41□□□□□ -2.02
PRPF8-211ENST00000574728 RBM12B-AS1Q9P1G2 102 aa2.41□□□□□ -2.02
PRPF8-211ENST00000574728 IGKV4-1P06312 121 aa2.4□□□□□ -2.03
PRPF8-211ENST00000574728 IMUPQ9GZP8 106 aa2.4□□□□□ -2.03
PRPF8-211ENST00000574728 A0A1W2PPM0 123 aa2.39□□□□□ -2.03
PRPF8-211ENST00000574728 CCDC179H3BU77 68 aa2.39□□□□□ -2.03
PRPF8-211ENST00000574728 PRR15Q8IV56 129 aa2.39□□□□□ -2.03
PRPF8-211ENST00000574728 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
PRPF8-211ENST00000574728 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
PRPF8-211ENST00000574728 PSPHP1O15172 72 aa2.38□□□□□ -2.03
PRPF8-211ENST00000574728 HRES1P13985 223 aa2.38□□□□□ -2.03
PRPF8-211ENST00000574728 LINC00313P59037 77 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms