RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 Q6ZQY7 126 aa6.01□□□□□ -1.45
PRPF8-208ENST00000573716 SMIM11BQ8TCY0 68 aa6.01□□□□□ -1.45
PRPF8-208ENST00000573716 DSCR10P59022 87 aa6□□□□□ -1.45
PRPF8-208ENST00000573716 C2orf91Q6ZV80 131 aa6□□□□□ -1.45
PRPF8-208ENST00000573716 COPS9Q8WXC6 57 aa6□□□□□ -1.45
PRPF8-208ENST00000573716 ANAPC13Q9BS18 74 aa6□□□□□ -1.45
PRPF8-208ENST00000573716 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
PRPF8-208ENST00000573716 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
PRPF8-208ENST00000573716 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
PRPF8-208ENST00000573716 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
PRPF8-208ENST00000573716 ATOH7Q8N100 152 aa5.98□□□□□ -1.45
PRPF8-208ENST00000573716 IFITM1P13164 125 aa5.97□□□□□ -1.45
PRPF8-208ENST00000573716 HRES1P13985 223 aa5.97□□□□□ -1.45
PRPF8-208ENST00000573716 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
PRPF8-208ENST00000573716 MUSTN1Q8IVN3 82 aa5.97□□□□□ -1.45
PRPF8-208ENST00000573716 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
PRPF8-208ENST00000573716 hADV29S1A0JD25 119 aa5.96□□□□□ -1.46
PRPF8-208ENST00000573716 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
PRPF8-208ENST00000573716 PPDPFLQ8WWR9 84 aa5.95□□□□□ -1.46
PRPF8-208ENST00000573716 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
PRPF8-208ENST00000573716 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
PRPF8-208ENST00000573716 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
PRPF8-208ENST00000573716 A0A1B0GX51 115 aa5.91□□□□□ -1.46
PRPF8-208ENST00000573716 CEND1Q8N111 149 aa5.91□□□□□ -1.46
PRPF8-208ENST00000573716 PRO0461Q9UI25 63 aa5.91□□□□□ -1.46
PRPF8-208ENST00000573716 A0A087WSZ3 146 aa5.9□□□□□ -1.46
PRPF8-208ENST00000573716 NDUFV3P56181 108 aaKnown RBP5.9□□□□□ -1.46
PRPF8-208ENST00000573716 ETDBQ3ZM63 59 aa5.9□□□□□ -1.46
PRPF8-208ENST00000573716 TEN1Q86WV5 123 aa5.9□□□□□ -1.46
PRPF8-208ENST00000573716 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
PRPF8-208ENST00000573716 SNCGO76070 127 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 LINC00313P59037 77 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.89□□□□□ -1.47
PRPF8-208ENST00000573716 NOTCH2NLQ7Z3S9 236 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 NEBP20929 6669 aa5.89□□□□□ -1.47
PRPF8-208ENST00000573716 RAB37Q96AX2 223 aa5.88□□□□□ -1.47
PRPF8-208ENST00000573716 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
PRPF8-208ENST00000573716 SCGB1C2P0DMR2 95 aa5.86□□□□□ -1.47
PRPF8-208ENST00000573716 FAM240AA0A1B0GVK7 77 aa5.85□□□□□ -1.47
PRPF8-208ENST00000573716 A8MWP4 228 aa5.85□□□□□ -1.47
PRPF8-208ENST00000573716 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
PRPF8-208ENST00000573716 J3KT08 172 aa5.84□□□□□ -1.47
PRPF8-208ENST00000573716 IGKV4-1P06312 121 aa5.83□□□□□ -1.48
PRPF8-208ENST00000573716 ACYP1P07311 99 aa5.82□□□□□ -1.48
PRPF8-208ENST00000573716 FXYD2P54710 66 aa5.82□□□□□ -1.48
PRPF8-208ENST00000573716 HIST1H4GQ99525 98 aa5.8□□□□□ -1.48
PRPF8-208ENST00000573716 UQCRQO14949 82 aa5.79□□□□□ -1.48
PRPF8-208ENST00000573716 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
PRPF8-208ENST00000573716 DEFB116Q30KQ4 102 aa5.78□□□□□ -1.48
PRPF8-208ENST00000573716 NAA38Q9BRA0 125 aaKnown RBP5.77□□□□□ -1.49
PRPF8-208ENST00000573716 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
PRPF8-208ENST00000573716 SPINK7P58062 85 aa5.76□□□□□ -1.49
PRPF8-208ENST00000573716 C9JAW5 83 aa5.75□□□□□ -1.49
PRPF8-208ENST00000573716 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
PRPF8-208ENST00000573716 PSMB2P49721 201 aa5.74□□□□□ -1.49
PRPF8-208ENST00000573716 WFDC13Q8IUB5 93 aa5.74□□□□□ -1.49
PRPF8-208ENST00000573716 H3BT86 120 aa5.73□□□□□ -1.49
PRPF8-208ENST00000573716 K7ERJ3 54 aa5.73□□□□□ -1.49
PRPF8-208ENST00000573716 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
PRPF8-208ENST00000573716 ANKRD29Q8N6D5 301 aa5.73□□□□□ -1.49
PRPF8-208ENST00000573716 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
PRPF8-208ENST00000573716 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
PRPF8-208ENST00000573716 TMEM258P61165 79 aa5.72□□□□□ -1.49
PRPF8-208ENST00000573716 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
PRPF8-208ENST00000573716 A6NN06 94 aa5.71□□□□□ -1.5
PRPF8-208ENST00000573716 PRO1854Q9UHT4 67 aa5.71□□□□□ -1.5
PRPF8-208ENST00000573716 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
PRPF8-208ENST00000573716 A0A0B4J2C4 111 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 ATOX1O00244 68 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 TRIAP1O43715 76 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 COX6CP09669 75 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 FAM218AQ96MZ4 157 aa5.69□□□□□ -1.5
PRPF8-208ENST00000573716 COX7CP15954 63 aa5.68□□□□□ -1.5
PRPF8-208ENST00000573716 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
PRPF8-208ENST00000573716 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
PRPF8-208ENST00000573716 TRACP01848 142 aa5.67□□□□□ -1.5
PRPF8-208ENST00000573716 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
PRPF8-208ENST00000573716 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
PRPF8-208ENST00000573716 TRBV7-4A0A0J9YYF1 115 aa5.66□□□□□ -1.5
PRPF8-208ENST00000573716 A0A1B0GVX0 72 aa5.66□□□□□ -1.5
PRPF8-208ENST00000573716 H0YGX0 51 aa5.66□□□□□ -1.5
PRPF8-208ENST00000573716 CCKP06307 115 aa5.62□□□□□ -1.51
PRPF8-208ENST00000573716 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
PRPF8-208ENST00000573716 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
PRPF8-208ENST00000573716 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
PRPF8-208ENST00000573716 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
PRPF8-208ENST00000573716 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
PRPF8-208ENST00000573716 KRTAP2-3P0C7H8 128 aa5.58□□□□□ -1.52
PRPF8-208ENST00000573716 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
PRPF8-208ENST00000573716 KRTAP2-4Q9BYR9 128 aa5.58□□□□□ -1.52
PRPF8-208ENST00000573716 Q5VV11 94 aa5.56□□□□□ -1.52
PRPF8-208ENST00000573716 DNAL4O96015 105 aa5.55□□□□□ -1.52
PRPF8-208ENST00000573716 MT1BP07438 61 aa5.55□□□□□ -1.52
PRPF8-208ENST00000573716 ORMDL1Q9P0S3 153 aa5.55□□□□□ -1.52
PRPF8-208ENST00000573716 V9GYY9 64 aa5.55□□□□□ -1.52
PRPF8-208ENST00000573716 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
PRPF8-208ENST00000573716 SEC61GP60059 68 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms