RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 FSIP2Q5CZC0 6907 aa8.05□□□□□ -1.12
NPLOC4-207ENST00000572346 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
NPLOC4-207ENST00000572346 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
NPLOC4-207ENST00000572346 IGKV4-1P06312 121 aa8.04□□□□□ -1.12
NPLOC4-207ENST00000572346 MT1HP80294 61 aa8.03□□□□□ -1.12
NPLOC4-207ENST00000572346 ETDBQ3ZM63 59 aa8.03□□□□□ -1.12
NPLOC4-207ENST00000572346 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
NPLOC4-207ENST00000572346 Q96NJ1 140 aa8.03□□□□□ -1.12
NPLOC4-207ENST00000572346 DEFB116Q30KQ4 102 aa8.02□□□□□ -1.13
NPLOC4-207ENST00000572346 LINC00472Q9H8W2 130 aa8.01□□□□□ -1.13
NPLOC4-207ENST00000572346 NREPQ16612 68 aa8□□□□□ -1.13
NPLOC4-207ENST00000572346 J3KT08 172 aa7.98□□□□□ -1.13
NPLOC4-207ENST00000572346 NDUFB1O75438 58 aa7.93□□□□□ -1.14
NPLOC4-207ENST00000572346 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
NPLOC4-207ENST00000572346 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
NPLOC4-207ENST00000572346 DSCR10P59022 87 aa7.91□□□□□ -1.14
NPLOC4-207ENST00000572346 LINC00313P59037 77 aa7.91□□□□□ -1.14
NPLOC4-207ENST00000572346 KRTAP10-6P60371 365 aaPredicted RBP7.91□□□□□ -1.14
NPLOC4-207ENST00000572346 UBL5Q9BZL1 73 aa7.91□□□□□ -1.14
NPLOC4-207ENST00000572346 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
NPLOC4-207ENST00000572346 Q6ZVQ6 151 aa7.9□□□□□ -1.14
NPLOC4-207ENST00000572346 BPY2O14599 106 aa7.89□□□□□ -1.15
NPLOC4-207ENST00000572346 A8MWP4 228 aa7.88□□□□□ -1.15
NPLOC4-207ENST00000572346 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
NPLOC4-207ENST00000572346 C8orf87E5RJ46 101 aa7.87□□□□□ -1.15
NPLOC4-207ENST00000572346 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
NPLOC4-207ENST00000572346 M0R2T5 61 aa7.84□□□□□ -1.15
NPLOC4-207ENST00000572346 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
NPLOC4-207ENST00000572346 ACYP1P07311 99 aa7.83□□□□□ -1.16
NPLOC4-207ENST00000572346 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
NPLOC4-207ENST00000572346 COX6B2Q6YFQ2 88 aa7.82□□□□□ -1.16
NPLOC4-207ENST00000572346 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
NPLOC4-207ENST00000572346 Q75L30 129 aa7.81□□□□□ -1.16
NPLOC4-207ENST00000572346 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
NPLOC4-207ENST00000572346 K7EQZ3 153 aa7.79□□□□□ -1.16
NPLOC4-207ENST00000572346 ATP11AUNQ6ZP68 121 aa7.79□□□□□ -1.16
NPLOC4-207ENST00000572346 FLGP20930 4061 aaPredicted RBP7.78□□□□□ -1.16
NPLOC4-207ENST00000572346 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
NPLOC4-207ENST00000572346 A8MUU9 505 aa7.78□□□□□ -1.16
NPLOC4-207ENST00000572346 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
NPLOC4-207ENST00000572346 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
NPLOC4-207ENST00000572346 J3QR89 54 aa7.77□□□□□ -1.17
NPLOC4-207ENST00000572346 Q8N9L7 120 aa7.75□□□□□ -1.17
NPLOC4-207ENST00000572346 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
NPLOC4-207ENST00000572346 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
NPLOC4-207ENST00000572346 CXCL6P80162 114 aa7.72□□□□□ -1.17
NPLOC4-207ENST00000572346 TMEM254Q8TBM7 123 aa7.71□□□□□ -1.18
NPLOC4-207ENST00000572346 WFDC13Q8IUB5 93 aa7.7□□□□□ -1.18
NPLOC4-207ENST00000572346 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
NPLOC4-207ENST00000572346 NDUFS5O43920 106 aa7.68□□□□□ -1.18
NPLOC4-207ENST00000572346 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
NPLOC4-207ENST00000572346 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
NPLOC4-207ENST00000572346 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
NPLOC4-207ENST00000572346 LINC00643Q86TS7 51 aa7.66□□□□□ -1.18
NPLOC4-207ENST00000572346 HCG22E2RYF7 251 aa7.65□□□□□ -1.18
NPLOC4-207ENST00000572346 HIST1H4AP62805 103 aaKnown RBP7.63□□□□□ -1.19
NPLOC4-207ENST00000572346 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
NPLOC4-207ENST00000572346 K7ERU9 68 aa7.62□□□□□ -1.19
NPLOC4-207ENST00000572346 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
NPLOC4-207ENST00000572346 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
NPLOC4-207ENST00000572346 KRTAP9-7A8MTY7 169 aa7.53□□□□□ -1.2
NPLOC4-207ENST00000572346 USH2AO75445 5202 aa7.52□□□□□ -1.21
NPLOC4-207ENST00000572346 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
NPLOC4-207ENST00000572346 A0A087WVE0 104 aa7.5□□□□□ -1.21
NPLOC4-207ENST00000572346 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
NPLOC4-207ENST00000572346 SPINK7P58062 85 aa7.49□□□□□ -1.21
NPLOC4-207ENST00000572346 Q5W150 140 aa7.47□□□□□ -1.21
NPLOC4-207ENST00000572346 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
NPLOC4-207ENST00000572346 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
NPLOC4-207ENST00000572346 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
NPLOC4-207ENST00000572346 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
NPLOC4-207ENST00000572346 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
NPLOC4-207ENST00000572346 MT2AP02795 61 aa7.42□□□□□ -1.22
NPLOC4-207ENST00000572346 HRES1P13985 223 aa7.42□□□□□ -1.22
NPLOC4-207ENST00000572346 C7orf65Q6ZTY9 151 aa7.42□□□□□ -1.22
NPLOC4-207ENST00000572346 MT-ATP8P03928 68 aa7.41□□□□□ -1.22
NPLOC4-207ENST00000572346 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
NPLOC4-207ENST00000572346 UQCRQO14949 82 aa7.39□□□□□ -1.23
NPLOC4-207ENST00000572346 SCGB1A1P11684 91 aa7.38□□□□□ -1.23
NPLOC4-207ENST00000572346 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
NPLOC4-207ENST00000572346 LCE2BO14633 110 aa7.36□□□□□ -1.23
NPLOC4-207ENST00000572346 MT1FP04733 61 aa7.36□□□□□ -1.23
NPLOC4-207ENST00000572346 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-207ENST00000572346 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
NPLOC4-207ENST00000572346 MPLKIPQ8TAP9 179 aa7.34□□□□□ -1.23
NPLOC4-207ENST00000572346 H0Y9P7 68 aa7.33□□□□□ -1.24
NPLOC4-207ENST00000572346 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
NPLOC4-207ENST00000572346 ATOX1O00244 68 aa7.31□□□□□ -1.24
NPLOC4-207ENST00000572346 PCP4P48539 62 aa7.31□□□□□ -1.24
NPLOC4-207ENST00000572346 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
NPLOC4-207ENST00000572346 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
NPLOC4-207ENST00000572346 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
NPLOC4-207ENST00000572346 MP68P56378 58 aa7.29□□□□□ -1.24
NPLOC4-207ENST00000572346 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
NPLOC4-207ENST00000572346 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
NPLOC4-207ENST00000572346 C5orf47Q569G3 176 aa7.26□□□□□ -1.25
NPLOC4-207ENST00000572346 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
NPLOC4-207ENST00000572346 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
NPLOC4-207ENST00000572346 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
NPLOC4-207ENST00000572346 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms