RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 H3BT86 120 aa7.14□□□□□ -1.27
GTF3C1-211ENST00000569653 JMJD7-PLA2G4BH0Y9G9 81 aa7.13□□□□□ -1.27
GTF3C1-211ENST00000569653 K7EP34 96 aa7.13□□□□□ -1.27
GTF3C1-211ENST00000569653 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
GTF3C1-211ENST00000569653 C21orf62-AS1Q17RA5 79 aa7.13□□□□□ -1.27
GTF3C1-211ENST00000569653 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
GTF3C1-211ENST00000569653 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
GTF3C1-211ENST00000569653 Q6ZQT0 140 aa7.12□□□□□ -1.27
GTF3C1-211ENST00000569653 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
GTF3C1-211ENST00000569653 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
GTF3C1-211ENST00000569653 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
GTF3C1-211ENST00000569653 LINC00472Q9H8W2 130 aa7.1□□□□□ -1.27
GTF3C1-211ENST00000569653 A8MUU9 505 aa7.09□□□□□ -1.27
GTF3C1-211ENST00000569653 DSCR10P59022 87 aa7.09□□□□□ -1.27
GTF3C1-211ENST00000569653 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 PDE6GP18545 87 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 LINC00313P59037 77 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 DEFB116Q30KQ4 102 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 USH2AO75445 5202 aa7.07□□□□□ -1.28
GTF3C1-211ENST00000569653 A0A1B0GW54 56 aa7.05□□□□□ -1.28
GTF3C1-211ENST00000569653 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
GTF3C1-211ENST00000569653 J3KT08 172 aa7.04□□□□□ -1.28
GTF3C1-211ENST00000569653 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
GTF3C1-211ENST00000569653 GTF2H5Q6ZYL4 71 aa7.03□□□□□ -1.28
GTF3C1-211ENST00000569653 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
GTF3C1-211ENST00000569653 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
GTF3C1-211ENST00000569653 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
GTF3C1-211ENST00000569653 F8W1H4 67 aa6.99□□□□□ -1.29
GTF3C1-211ENST00000569653 NDUFB1O75438 58 aa6.98□□□□□ -1.29
GTF3C1-211ENST00000569653 MT2AP02795 61 aa6.95□□□□□ -1.3
GTF3C1-211ENST00000569653 A0A1B0GV90 55 aa6.94□□□□□ -1.3
GTF3C1-211ENST00000569653 A8MWP4 228 aa6.94□□□□□ -1.3
GTF3C1-211ENST00000569653 HRES1P13985 223 aa6.94□□□□□ -1.3
GTF3C1-211ENST00000569653 ETDBQ3ZM63 59 aa6.94□□□□□ -1.3
GTF3C1-211ENST00000569653 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
GTF3C1-211ENST00000569653 NREPQ16612 68 aa6.93□□□□□ -1.3
GTF3C1-211ENST00000569653 MT1FP04733 61 aa6.91□□□□□ -1.3
GTF3C1-211ENST00000569653 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.9□□□□□ -1.3
GTF3C1-211ENST00000569653 IGKV3D-7A0A0C4DH55 119 aa6.89□□□□□ -1.31
GTF3C1-211ENST00000569653 Q6ZVQ6 151 aa6.89□□□□□ -1.31
GTF3C1-211ENST00000569653 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
GTF3C1-211ENST00000569653 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
GTF3C1-211ENST00000569653 LCE2BO14633 110 aa6.88□□□□□ -1.31
GTF3C1-211ENST00000569653 FCGBPQ9Y6R7 5405 aaPredicted RBP6.88□□□□□ -1.31
GTF3C1-211ENST00000569653 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
GTF3C1-211ENST00000569653 Q8N9P0 234 aaPredicted RBP6.85□□□□□ -1.31
GTF3C1-211ENST00000569653 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
GTF3C1-211ENST00000569653 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
GTF3C1-211ENST00000569653 FAM236DA0A1B0GTK5 79 aa6.83□□□□□ -1.32
GTF3C1-211ENST00000569653 K7EQZ3 153 aa6.83□□□□□ -1.32
GTF3C1-211ENST00000569653 FAM236CP0DP71 79 aa6.83□□□□□ -1.32
GTF3C1-211ENST00000569653 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
GTF3C1-211ENST00000569653 BPY2O14599 106 aa6.82□□□□□ -1.32
GTF3C1-211ENST00000569653 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
GTF3C1-211ENST00000569653 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
GTF3C1-211ENST00000569653 TMEM254Q8TBM7 123 aa6.8□□□□□ -1.32
GTF3C1-211ENST00000569653 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
GTF3C1-211ENST00000569653 Q8N9L7 120 aa6.79□□□□□ -1.32
GTF3C1-211ENST00000569653 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
GTF3C1-211ENST00000569653 UBL5Q9BZL1 73 aa6.79□□□□□ -1.32
GTF3C1-211ENST00000569653 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
GTF3C1-211ENST00000569653 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
GTF3C1-211ENST00000569653 SPINK7P58062 85 aa6.76□□□□□ -1.33
GTF3C1-211ENST00000569653 NDUFS5O43920 106 aa6.74□□□□□ -1.33
GTF3C1-211ENST00000569653 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
GTF3C1-211ENST00000569653 ACYP1P07311 99 aa6.72□□□□□ -1.33
GTF3C1-211ENST00000569653 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
GTF3C1-211ENST00000569653 CXCL6P80162 114 aa6.69□□□□□ -1.34
GTF3C1-211ENST00000569653 WFDC13Q8IUB5 93 aa6.69□□□□□ -1.34
GTF3C1-211ENST00000569653 HCG22E2RYF7 251 aa6.65□□□□□ -1.34
GTF3C1-211ENST00000569653 Q5W150 140 aa6.62□□□□□ -1.35
GTF3C1-211ENST00000569653 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-211ENST00000569653 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
GTF3C1-211ENST00000569653 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
GTF3C1-211ENST00000569653 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
GTF3C1-211ENST00000569653 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
GTF3C1-211ENST00000569653 ATP5EP2Q5VTU8 51 aa6.59□□□□□ -1.35
GTF3C1-211ENST00000569653 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
GTF3C1-211ENST00000569653 J3QR89 54 aa6.56□□□□□ -1.36
GTF3C1-211ENST00000569653 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-211ENST00000569653 HIST1H4AP62805 103 aaKnown RBP6.54□□□□□ -1.36
GTF3C1-211ENST00000569653 A0A087WVE0 104 aa6.53□□□□□ -1.36
GTF3C1-211ENST00000569653 TP53AIP1Q9HCN2 124 aa6.52□□□□□ -1.37
GTF3C1-211ENST00000569653 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
GTF3C1-211ENST00000569653 K7ERU9 68 aa6.46□□□□□ -1.38
GTF3C1-211ENST00000569653 C4orf26Q17RF5 130 aa6.46□□□□□ -1.38
GTF3C1-211ENST00000569653 MT-ATP8P03928 68 aa6.41□□□□□ -1.38
GTF3C1-211ENST00000569653 TRAV22A0A0B4J277 110 aa6.4□□□□□ -1.38
GTF3C1-211ENST00000569653 UQCRQO14949 82 aa6.38□□□□□ -1.39
GTF3C1-211ENST00000569653 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
GTF3C1-211ENST00000569653 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
GTF3C1-211ENST00000569653 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
GTF3C1-211ENST00000569653 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
GTF3C1-211ENST00000569653 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
GTF3C1-211ENST00000569653 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
GTF3C1-211ENST00000569653 CYP4F30PQ9H0H9 118 aa6.35□□□□□ -1.39
GTF3C1-211ENST00000569653 H0Y9P7 68 aa6.33□□□□□ -1.4
GTF3C1-211ENST00000569653 ATOX1O00244 68 aa6.33□□□□□ -1.4
GTF3C1-211ENST00000569653 S4R3F8 94 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms