RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 IGKV4-1P06312 121 aa1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 GNG4P50150 75 aa1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 PRLHP81277 87 aa1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 SERF2P84101 59 aa1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 S100A7L2Q5SY68 101 aa1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 MRPL35Q9NZE8 188 aaKnown RBP1.53□□□□□ -2.16
HMGB1P6-201ENST00000569046 A0A087WSZ3 146 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 ADCYAP1P18509 176 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 RPL39P62891 51 aaKnown RBP1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 ATP11AUNQ6ZP68 121 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 GTF2H5Q6ZYL4 71 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 COA5Q86WW8 74 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 FAM213BQ8TBF2 198 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 ST20Q9HBF5 79 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 TOMM7Q9P0U1 55 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 UBE2D4Q9Y2X8 147 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 USH2AO75445 5202 aa1.52□□□□□ -2.17
HMGB1P6-201ENST00000569046 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 FXYD6-FXYD2A0A087WZ82 144 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 C7orf77A4D0Y5 90 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 C9orf92A6NGG3 77 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 F2Z2F3 143 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 NUPR1O60356 82 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 BCE1O60756 84 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 SNCGO76070 127 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 DNAL4O96015 105 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 IGKCP01834 107 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 FCER1GP30273 86 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 POLR2KP53803 58 aaKnown RBP1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 LINC01545Q5VT33 79 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 MRPL54Q6P161 138 aaKnown RBP1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 C9orf62Q8N4C0 152 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 COPS9Q8WXC6 57 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 GNG13Q9P2W3 67 aa1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 SYNE2Q8WXH0 6885 aaKnown RBP1.51□□□□□ -2.17
HMGB1P6-201ENST00000569046 TRBV6-5A0A0K0K1A5 114 aa1.5□□□□□ -2.17
HMGB1P6-201ENST00000569046 H3BRM9 83 aa1.5□□□□□ -2.17
HMGB1P6-201ENST00000569046 LIMD2Q9BT23 127 aa1.5□□□□□ -2.17
HMGB1P6-201ENST00000569046 MED9Q9NWA0 146 aa1.5□□□□□ -2.17
HMGB1P6-201ENST00000569046 ORMDL1Q9P0S3 153 aa1.5□□□□□ -2.17
HMGB1P6-201ENST00000569046 COX7CP15954 63 aa1.49□□□□□ -2.17
HMGB1P6-201ENST00000569046 C9orf153Q5TBE3 101 aa1.49□□□□□ -2.17
HMGB1P6-201ENST00000569046 COX6B2Q6YFQ2 88 aa1.49□□□□□ -2.17
HMGB1P6-201ENST00000569046 SERP1Q9Y6X1 66 aa1.49□□□□□ -2.17
HMGB1P6-201ENST00000569046 FLGP20930 4061 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 TRBV30A0A0K0K1B3 111 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 TMEM218A2RU14 115 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 S100A8P05109 93 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 KRTAP12-3P60328 96 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 NDUFA12Q9UI09 145 aa1.48□□□□□ -2.17
HMGB1P6-201ENST00000569046 TRAV23DV6A0A075B6W5 121 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 RBM3P98179 157 aaKnown RBP1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 HSD52Q0P140 79 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 SPAG11AQ6PDA7 123 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 SVBPQ8N300 66 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 ZNF625Q96I27 306 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 SPRR4Q96PI1 79 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 CNFNQ9BYD5 112 aa1.47□□□□□ -2.17
HMGB1P6-201ENST00000569046 A0A1B0GUT8 65 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 HIGD1CA8MV81 97 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 S100ZQ8WXG8 99 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 DSCR8Q96T75 97 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 MANBALQ9NQG1 85 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 CDKN2A-AS1Q9UH64 79 aa1.46□□□□□ -2.18
HMGB1P6-201ENST00000569046 D6R8Y8 96 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 F8VRH5 84 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 M0R143 59 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 SPINK1P00995 79 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 SPINK8P0C7L1 97 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 IFITM1P13164 125 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 IFI27P40305 119 aaPredicted RBP1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 Q8IZM0 81 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 SPTSSBQ8NFR3 76 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 TMEM141Q96I45 108 aa1.45□□□□□ -2.18
HMGB1P6-201ENST00000569046 KANTRA0A1W2PQU2 76 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 UMAD1C9J7I0 102 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 NPC2P61916 151 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 SMIM2Q9BVW6 85 aa1.44□□□□□ -2.18
HMGB1P6-201ENST00000569046 NCR3O14931 201 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 MT2AP02795 61 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 AMELXQ99217 191 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 C20orf78Q9BR46 151 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 V9GYV3 84 aa1.43□□□□□ -2.18
HMGB1P6-201ENST00000569046 PPP1R17O96001 155 aa1.42□□□□□ -2.18
HMGB1P6-201ENST00000569046 MT1FP04733 61 aa1.42□□□□□ -2.18
HMGB1P6-201ENST00000569046 Q8N8P6 123 aa1.42□□□□□ -2.18
HMGB1P6-201ENST00000569046 PPDPFLQ8WWR9 84 aa1.42□□□□□ -2.18
HMGB1P6-201ENST00000569046 IFI27L1Q96BM0 104 aa1.42□□□□□ -2.18
HMGB1P6-201ENST00000569046 SNURFQ9Y675 71 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms