RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TRBV7-4A0A0J9YYF1 115 aa5.59□□□□□ -1.51
GTF3C1-209ENST00000568569 FABP2P12104 132 aa5.59□□□□□ -1.51
GTF3C1-209ENST00000568569 HSD52Q0P140 79 aa5.59□□□□□ -1.51
GTF3C1-209ENST00000568569 DEFB116Q30KQ4 102 aa5.59□□□□□ -1.51
GTF3C1-209ENST00000568569 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.51
GTF3C1-209ENST00000568569 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
GTF3C1-209ENST00000568569 C8orf87E5RJ46 101 aa5.57□□□□□ -1.52
GTF3C1-209ENST00000568569 TRIAP1O43715 76 aa5.57□□□□□ -1.52
GTF3C1-209ENST00000568569 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
GTF3C1-209ENST00000568569 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
GTF3C1-209ENST00000568569 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
GTF3C1-209ENST00000568569 ANKRD29Q8N6D5 301 aa5.56□□□□□ -1.52
GTF3C1-209ENST00000568569 A0A1B0GX51 115 aa5.55□□□□□ -1.52
GTF3C1-209ENST00000568569 PRO1854Q9UHT4 67 aa5.55□□□□□ -1.52
GTF3C1-209ENST00000568569 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
GTF3C1-209ENST00000568569 TRACP01848 142 aa5.53□□□□□ -1.52
GTF3C1-209ENST00000568569 SMIM6P0DI80 62 aa5.53□□□□□ -1.52
GTF3C1-209ENST00000568569 A0A1B0GV72 72 aa5.51□□□□□ -1.53
GTF3C1-209ENST00000568569 CCKP06307 115 aa5.51□□□□□ -1.53
GTF3C1-209ENST00000568569 LOC105371267A0A1B0GV96 52 aa5.5□□□□□ -1.53
GTF3C1-209ENST00000568569 A6NN06 94 aa5.48□□□□□ -1.53
GTF3C1-209ENST00000568569 PSMB2P49721 201 aa5.48□□□□□ -1.53
GTF3C1-209ENST00000568569 H3BQ85 93 aa5.47□□□□□ -1.53
GTF3C1-209ENST00000568569 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
GTF3C1-209ENST00000568569 NAA38Q9BRA0 125 aaKnown RBP5.47□□□□□ -1.53
GTF3C1-209ENST00000568569 ORMDL1Q9P0S3 153 aa5.47□□□□□ -1.53
GTF3C1-209ENST00000568569 DNAL4O96015 105 aa5.46□□□□□ -1.54
GTF3C1-209ENST00000568569 LYRM7Q5U5X0 104 aa5.46□□□□□ -1.54
GTF3C1-209ENST00000568569 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
GTF3C1-209ENST00000568569 J3KT08 172 aa5.44□□□□□ -1.54
GTF3C1-209ENST00000568569 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
GTF3C1-209ENST00000568569 SMCPP49901 116 aaPredicted RBP5.44□□□□□ -1.54
GTF3C1-209ENST00000568569 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
GTF3C1-209ENST00000568569 DSCR8Q96T75 97 aa5.42□□□□□ -1.54
GTF3C1-209ENST00000568569 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
GTF3C1-209ENST00000568569 M0R143 59 aa5.41□□□□□ -1.54
GTF3C1-209ENST00000568569 NDUFB1O75438 58 aa5.41□□□□□ -1.54
GTF3C1-209ENST00000568569 KRTAP5-9P26371 169 aa5.41□□□□□ -1.54
GTF3C1-209ENST00000568569 KMT2DO14686 5537 aa5.4□□□□□ -1.54
GTF3C1-209ENST00000568569 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
GTF3C1-209ENST00000568569 TSTD3H0UI37 97 aa5.4□□□□□ -1.54
GTF3C1-209ENST00000568569 BATFQ16520 125 aa5.4□□□□□ -1.54
GTF3C1-209ENST00000568569 COX6CP09669 75 aa5.39□□□□□ -1.55
GTF3C1-209ENST00000568569 UBE2V1Q13404 147 aa5.39□□□□□ -1.55
GTF3C1-209ENST00000568569 MT1BP07438 61 aa5.38□□□□□ -1.55
GTF3C1-209ENST00000568569 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
GTF3C1-209ENST00000568569 SCGB1C2P0DMR2 95 aa5.37□□□□□ -1.55
GTF3C1-209ENST00000568569 Q5VV11 94 aa5.37□□□□□ -1.55
GTF3C1-209ENST00000568569 RBM3P98179 157 aaKnown RBP5.36□□□□□ -1.55
GTF3C1-209ENST00000568569 Q6ZVQ6 151 aa5.35□□□□□ -1.55
GTF3C1-209ENST00000568569 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
GTF3C1-209ENST00000568569 Q6ZQT0 140 aa5.34□□□□□ -1.55
GTF3C1-209ENST00000568569 FAM236AA0A1B0GUQ0 79 aa5.33□□□□□ -1.56
GTF3C1-209ENST00000568569 FAM236BA0A1B0GV22 79 aa5.33□□□□□ -1.56
GTF3C1-209ENST00000568569 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
GTF3C1-209ENST00000568569 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
GTF3C1-209ENST00000568569 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
GTF3C1-209ENST00000568569 C9JAW5 83 aa5.31□□□□□ -1.56
GTF3C1-209ENST00000568569 TAX1BP3O14907 124 aa5.31□□□□□ -1.56
GTF3C1-209ENST00000568569 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
GTF3C1-209ENST00000568569 BAALC-AS2P0C853 105 aa5.3□□□□□ -1.56
GTF3C1-209ENST00000568569 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
GTF3C1-209ENST00000568569 C9orf118A6NHY6 69 aa5.28□□□□□ -1.56
GTF3C1-209ENST00000568569 MRPL34Q9BQ48 92 aaKnown RBP5.28□□□□□ -1.56
GTF3C1-209ENST00000568569 IGKV2D-30A0A075B6S6 120 aa5.27□□□□□ -1.57
GTF3C1-209ENST00000568569 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
GTF3C1-209ENST00000568569 IGKV2-30P06310 120 aa5.27□□□□□ -1.57
GTF3C1-209ENST00000568569 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
GTF3C1-209ENST00000568569 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
GTF3C1-209ENST00000568569 C5orf47Q569G3 176 aa5.26□□□□□ -1.57
GTF3C1-209ENST00000568569 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
GTF3C1-209ENST00000568569 C14orf132Q9NPU4 83 aa5.26□□□□□ -1.57
GTF3C1-209ENST00000568569 MMP24-AS1A0A0U1RRL7 71 aa5.24□□□□□ -1.57
GTF3C1-209ENST00000568569 A0A1B0GW54 56 aa5.24□□□□□ -1.57
GTF3C1-209ENST00000568569 NDUFS5O43920 106 aa5.24□□□□□ -1.57
GTF3C1-209ENST00000568569 LOC110117498A0A087WWA1 95 aa5.23□□□□□ -1.57
GTF3C1-209ENST00000568569 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
GTF3C1-209ENST00000568569 C4orf26Q17RF5 130 aa5.21□□□□□ -1.58
GTF3C1-209ENST00000568569 SPCS1Q9Y6A9 102 aa5.21□□□□□ -1.58
GTF3C1-209ENST00000568569 JMJD7-PLA2G4BH0Y9G9 81 aa5.2□□□□□ -1.58
GTF3C1-209ENST00000568569 H3BT86 120 aa5.2□□□□□ -1.58
GTF3C1-209ENST00000568569 IMUPQ9GZP8 106 aa5.2□□□□□ -1.58
GTF3C1-209ENST00000568569 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
GTF3C1-209ENST00000568569 SPRR2EP22531 72 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 SPRR2BP35325 72 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 SPRR2AP35326 72 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 COL5A1-AS1Q5SY13 56 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 Q5W150 140 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
GTF3C1-209ENST00000568569 PDE6GP18545 87 aa5.17□□□□□ -1.58
GTF3C1-209ENST00000568569 NREPQ16612 68 aa5.17□□□□□ -1.58
GTF3C1-209ENST00000568569 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
GTF3C1-209ENST00000568569 S4R3F8 94 aa5.17□□□□□ -1.58
GTF3C1-209ENST00000568569 K7EP34 96 aa5.16□□□□□ -1.58
GTF3C1-209ENST00000568569 KLKP1Q107X0 134 aa5.16□□□□□ -1.58
GTF3C1-209ENST00000568569 K7EQZ3 153 aa5.15□□□□□ -1.59
GTF3C1-209ENST00000568569 PRO0461Q9UI25 63 aa5.15□□□□□ -1.59
GTF3C1-209ENST00000568569 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
GTF3C1-209ENST00000568569 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
GTF3C1-209ENST00000568569 LCA10Q71F78 164 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms