RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 J3KT08 172 aa9.56□□□□□ -0.88
IFT140-208ENST00000566818 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
IFT140-208ENST00000566818 JMJD7-PLA2G4BH0Y9G9 81 aa9.53□□□□□ -0.88
IFT140-208ENST00000566818 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
IFT140-208ENST00000566818 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.89
IFT140-208ENST00000566818 SMIM6P0DI80 62 aa9.51□□□□□ -0.89
IFT140-208ENST00000566818 Q6ZQT0 140 aa9.51□□□□□ -0.89
IFT140-208ENST00000566818 RBM12B-AS1Q9P1G2 102 aa9.51□□□□□ -0.89
IFT140-208ENST00000566818 LYRM7Q5U5X0 104 aa9.5□□□□□ -0.89
IFT140-208ENST00000566818 A0A1B0GW54 56 aa9.48□□□□□ -0.89
IFT140-208ENST00000566818 NDUFB1O75438 58 aa9.48□□□□□ -0.89
IFT140-208ENST00000566818 LOC110117498A0A087WWA1 95 aa9.47□□□□□ -0.89
IFT140-208ENST00000566818 PDE6GP18545 87 aa9.47□□□□□ -0.89
IFT140-208ENST00000566818 HRES1P13985 223 aa9.45□□□□□ -0.9
IFT140-208ENST00000566818 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
IFT140-208ENST00000566818 ZCCHC13Q8WW36 166 aaKnown RBP9.43□□□□□ -0.9
IFT140-208ENST00000566818 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
IFT140-208ENST00000566818 A8MWP4 228 aa9.41□□□□□ -0.9
IFT140-208ENST00000566818 C14orf132Q9NPU4 83 aa9.41□□□□□ -0.9
IFT140-208ENST00000566818 BATFQ16520 125 aa9.39□□□□□ -0.91
IFT140-208ENST00000566818 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
IFT140-208ENST00000566818 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
IFT140-208ENST00000566818 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
IFT140-208ENST00000566818 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
IFT140-208ENST00000566818 IGKV3D-7A0A0C4DH55 119 aa9.34□□□□□ -0.91
IFT140-208ENST00000566818 NREPQ16612 68 aa9.34□□□□□ -0.91
IFT140-208ENST00000566818 SPINK7P58062 85 aa9.33□□□□□ -0.92
IFT140-208ENST00000566818 Q6ZVQ6 151 aa9.31□□□□□ -0.92
IFT140-208ENST00000566818 H3BT86 120 aa9.3□□□□□ -0.92
IFT140-208ENST00000566818 PRR15Q8IV56 129 aa9.3□□□□□ -0.92
IFT140-208ENST00000566818 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
IFT140-208ENST00000566818 USH2AO75445 5202 aa9.28□□□□□ -0.92
IFT140-208ENST00000566818 MT2AP02795 61 aa9.26□□□□□ -0.93
IFT140-208ENST00000566818 A0A1W2PPM0 123 aa9.25□□□□□ -0.93
IFT140-208ENST00000566818 TMEM254Q8TBM7 123 aa9.24□□□□□ -0.93
IFT140-208ENST00000566818 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
IFT140-208ENST00000566818 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
IFT140-208ENST00000566818 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
IFT140-208ENST00000566818 TAX1BP3O14907 124 aa9.22□□□□□ -0.93
IFT140-208ENST00000566818 hDV103S1A0JD37 113 aa9.19□□□□□ -0.94
IFT140-208ENST00000566818 K7EQZ3 153 aa9.19□□□□□ -0.94
IFT140-208ENST00000566818 SSPOA2VEC9 5147 aa9.18□□□□□ -0.94
IFT140-208ENST00000566818 MT1FP04733 61 aa9.18□□□□□ -0.94
IFT140-208ENST00000566818 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
IFT140-208ENST00000566818 LOC105371267A0A1B0GV96 52 aa9.17□□□□□ -0.94
IFT140-208ENST00000566818 BPY2O14599 106 aa9.17□□□□□ -0.94
IFT140-208ENST00000566818 NDUFS5O43920 106 aa9.17□□□□□ -0.94
IFT140-208ENST00000566818 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
IFT140-208ENST00000566818 KRTAP9-3Q9BYQ3 159 aa9.08□□□□□ -0.96
IFT140-208ENST00000566818 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
IFT140-208ENST00000566818 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
IFT140-208ENST00000566818 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
IFT140-208ENST00000566818 LCE2BO14633 110 aa9.04□□□□□ -0.96
IFT140-208ENST00000566818 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
IFT140-208ENST00000566818 Q8N9L7 120 aa9.03□□□□□ -0.96
IFT140-208ENST00000566818 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
IFT140-208ENST00000566818 COL5A1-AS1Q5SY13 56 aa9.02□□□□□ -0.97
IFT140-208ENST00000566818 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
IFT140-208ENST00000566818 HCG22E2RYF7 251 aa9□□□□□ -0.97
IFT140-208ENST00000566818 UBL5Q9BZL1 73 aa9□□□□□ -0.97
IFT140-208ENST00000566818 FCGBPQ9Y6R7 5405 aaPredicted RBP8.98□□□□□ -0.97
IFT140-208ENST00000566818 Q5W150 140 aa8.98□□□□□ -0.97
IFT140-208ENST00000566818 CXCL6P80162 114 aa8.97□□□□□ -0.97
IFT140-208ENST00000566818 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.98
IFT140-208ENST00000566818 K7EP34 96 aa8.96□□□□□ -0.98
IFT140-208ENST00000566818 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
IFT140-208ENST00000566818 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
IFT140-208ENST00000566818 KRTAP19-1Q8IUB9 90 aa8.94□□□□□ -0.98
IFT140-208ENST00000566818 KRTAP9-7A8MTY7 169 aa8.87□□□□□ -0.99
IFT140-208ENST00000566818 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
IFT140-208ENST00000566818 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
IFT140-208ENST00000566818 F8W1H4 67 aa8.79□□□□□ -1
IFT140-208ENST00000566818 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
IFT140-208ENST00000566818 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
IFT140-208ENST00000566818 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
IFT140-208ENST00000566818 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
IFT140-208ENST00000566818 S4R3F8 94 aa8.72□□□□□ -1.01
IFT140-208ENST00000566818 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
IFT140-208ENST00000566818 C1orf64Q8NEQ6 169 aa8.7□□□□□ -1.02
IFT140-208ENST00000566818 MACF1Q9UPN3 7388 aaKnown RBP8.67□□□□□ -1.02
IFT140-208ENST00000566818 FAM236AA0A1B0GUQ0 79 aa8.67□□□□□ -1.02
IFT140-208ENST00000566818 FAM236BA0A1B0GV22 79 aa8.67□□□□□ -1.02
IFT140-208ENST00000566818 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
IFT140-208ENST00000566818 CSAG1Q6PB30 78 aa8.65□□□□□ -1.02
IFT140-208ENST00000566818 ACYP1P07311 99 aa8.61□□□□□ -1.03
IFT140-208ENST00000566818 LCA10Q71F78 164 aa8.61□□□□□ -1.03
IFT140-208ENST00000566818 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
IFT140-208ENST00000566818 ATP5EP2Q5VTU8 51 aa8.58□□□□□ -1.04
IFT140-208ENST00000566818 SYNE2Q8WXH0 6885 aaKnown RBP8.57□□□□□ -1.04
IFT140-208ENST00000566818 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
IFT140-208ENST00000566818 CYP4F30PQ9H0H9 118 aa8.56□□□□□ -1.04
IFT140-208ENST00000566818 FAM240AA0A1B0GVK7 77 aa8.55□□□□□ -1.04
IFT140-208ENST00000566818 HIST1H4AP62805 103 aaKnown RBP8.5□□□□□ -1.05
IFT140-208ENST00000566818 ATOX1O00244 68 aa8.47□□□□□ -1.05
IFT140-208ENST00000566818 UQCRQO14949 82 aa8.47□□□□□ -1.05
IFT140-208ENST00000566818 Q5VV11 94 aa8.47□□□□□ -1.05
IFT140-208ENST00000566818 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
IFT140-208ENST00000566818 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
IFT140-208ENST00000566818 H0Y9P7 68 aa8.44□□□□□ -1.06
IFT140-208ENST00000566818 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms