RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
CLN6-207ENST00000566347 C21orf62-AS1Q17RA5 79 aa10.15□□□□□ -0.78
CLN6-207ENST00000566347 A0A1B0GVX0 72 aa10.14□□□□□ -0.79
CLN6-207ENST00000566347 HRES1P13985 223 aa10.12□□□□□ -0.79
CLN6-207ENST00000566347 MPLKIPQ8TAP9 179 aa10.12□□□□□ -0.79
CLN6-207ENST00000566347 C9JAW5 83 aa10.11□□□□□ -0.79
CLN6-207ENST00000566347 J3KT08 172 aa10.1□□□□□ -0.79
CLN6-207ENST00000566347 BAALC-AS2P0C853 105 aa10.1□□□□□ -0.79
CLN6-207ENST00000566347 Q6ZQT0 140 aa10.05□□□□□ -0.8
CLN6-207ENST00000566347 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
CLN6-207ENST00000566347 NDUFB1O75438 58 aa10.02□□□□□ -0.81
CLN6-207ENST00000566347 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
CLN6-207ENST00000566347 JMJD7-PLA2G4BH0Y9G9 81 aa10.01□□□□□ -0.81
CLN6-207ENST00000566347 MT2AP02795 61 aa10.01□□□□□ -0.81
CLN6-207ENST00000566347 ATXN8Q156A1 80 aa10.01□□□□□ -0.81
CLN6-207ENST00000566347 A0A1B0GW54 56 aa10□□□□□ -0.81
CLN6-207ENST00000566347 BATFQ16520 125 aa9.99□□□□□ -0.81
CLN6-207ENST00000566347 LOC110117498A0A087WWA1 95 aa9.97□□□□□ -0.81
CLN6-207ENST00000566347 Q8N9P0 234 aaPredicted RBP9.97□□□□□ -0.81
CLN6-207ENST00000566347 PDE6GP18545 87 aa9.96□□□□□ -0.82
CLN6-207ENST00000566347 SPINK7P58062 85 aa9.96□□□□□ -0.82
CLN6-207ENST00000566347 LYRM7Q5U5X0 104 aa9.96□□□□□ -0.82
CLN6-207ENST00000566347 USH2AO75445 5202 aa9.96□□□□□ -0.82
CLN6-207ENST00000566347 A8MWP4 228 aa9.95□□□□□ -0.82
CLN6-207ENST00000566347 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
CLN6-207ENST00000566347 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
CLN6-207ENST00000566347 MT1FP04733 61 aa9.92□□□□□ -0.82
CLN6-207ENST00000566347 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
CLN6-207ENST00000566347 SSPOA2VEC9 5147 aa9.9□□□□□ -0.82
CLN6-207ENST00000566347 IGKV3D-7A0A0C4DH55 119 aa9.88□□□□□ -0.83
CLN6-207ENST00000566347 C14orf132Q9NPU4 83 aa9.88□□□□□ -0.83
CLN6-207ENST00000566347 Q6ZVQ6 151 aa9.86□□□□□ -0.83
CLN6-207ENST00000566347 C9orf118A6NHY6 69 aa9.85□□□□□ -0.83
CLN6-207ENST00000566347 TAX1BP3O14907 124 aa9.85□□□□□ -0.83
CLN6-207ENST00000566347 KRTAP9-3Q9BYQ3 159 aa9.85□□□□□ -0.83
CLN6-207ENST00000566347 PRR15Q8IV56 129 aa9.84□□□□□ -0.83
CLN6-207ENST00000566347 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.83□□□□□ -0.84
CLN6-207ENST00000566347 NREPQ16612 68 aa9.83□□□□□ -0.84
CLN6-207ENST00000566347 LCE2BO14633 110 aa9.82□□□□□ -0.84
CLN6-207ENST00000566347 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
CLN6-207ENST00000566347 A0A1W2PPM0 123 aa9.81□□□□□ -0.84
CLN6-207ENST00000566347 COL5A1-AS1Q5SY13 56 aa9.78□□□□□ -0.84
CLN6-207ENST00000566347 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
CLN6-207ENST00000566347 MRPL34Q9BQ48 92 aaKnown RBP9.76□□□□□ -0.85
CLN6-207ENST00000566347 MMP24-AS1A0A0U1RRL7 71 aa9.75□□□□□ -0.85
CLN6-207ENST00000566347 KRTAP9-7A8MTY7 169 aa9.75□□□□□ -0.85
CLN6-207ENST00000566347 KRTAP19-1Q8IUB9 90 aa9.73□□□□□ -0.85
CLN6-207ENST00000566347 H3BT86 120 aa9.72□□□□□ -0.85
CLN6-207ENST00000566347 hDV103S1A0JD37 113 aa9.71□□□□□ -0.86
CLN6-207ENST00000566347 PCP4L1A6NKN8 68 aa9.71□□□□□ -0.86
CLN6-207ENST00000566347 FCGBPQ9Y6R7 5405 aaPredicted RBP9.7□□□□□ -0.86
CLN6-207ENST00000566347 SPCS1Q9Y6A9 102 aa9.7□□□□□ -0.86
CLN6-207ENST00000566347 K7EQZ3 153 aa9.69□□□□□ -0.86
CLN6-207ENST00000566347 NDUFS5O43920 106 aa9.68□□□□□ -0.86
CLN6-207ENST00000566347 BPY2O14599 106 aa9.65□□□□□ -0.86
CLN6-207ENST00000566347 H1FX-AS1Q4G0G2 97 aa9.64□□□□□ -0.87
CLN6-207ENST00000566347 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
CLN6-207ENST00000566347 K7EP34 96 aa9.61□□□□□ -0.87
CLN6-207ENST00000566347 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
CLN6-207ENST00000566347 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
CLN6-207ENST00000566347 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
CLN6-207ENST00000566347 KRTAP19-6Q3LI70 58 aa9.54□□□□□ -0.88
CLN6-207ENST00000566347 Q5W150 140 aa9.54□□□□□ -0.88
CLN6-207ENST00000566347 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
CLN6-207ENST00000566347 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
CLN6-207ENST00000566347 GTF2H5Q6ZYL4 71 aa9.53□□□□□ -0.88
CLN6-207ENST00000566347 PRO0461Q9UI25 63 aa9.53□□□□□ -0.88
CLN6-207ENST00000566347 Q8N9L7 120 aa9.51□□□□□ -0.89
CLN6-207ENST00000566347 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
CLN6-207ENST00000566347 CXCL6P80162 114 aa9.47□□□□□ -0.89
CLN6-207ENST00000566347 MACF1Q9UPN3 7388 aaKnown RBP9.43□□□□□ -0.9
CLN6-207ENST00000566347 F8W1H4 67 aa9.41□□□□□ -0.9
CLN6-207ENST00000566347 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
CLN6-207ENST00000566347 UBL5Q9BZL1 73 aa9.41□□□□□ -0.9
CLN6-207ENST00000566347 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
CLN6-207ENST00000566347 SYNE2Q8WXH0 6885 aaKnown RBP9.32□□□□□ -0.92
CLN6-207ENST00000566347 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
CLN6-207ENST00000566347 S4R3F8 94 aa9.26□□□□□ -0.93
CLN6-207ENST00000566347 FAM236AA0A1B0GUQ0 79 aa9.25□□□□□ -0.93
CLN6-207ENST00000566347 FAM236BA0A1B0GV22 79 aa9.25□□□□□ -0.93
CLN6-207ENST00000566347 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
CLN6-207ENST00000566347 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
CLN6-207ENST00000566347 C1orf64Q8NEQ6 169 aa9.24□□□□□ -0.93
CLN6-207ENST00000566347 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
CLN6-207ENST00000566347 A0A1B0GV90 55 aa9.21□□□□□ -0.94
CLN6-207ENST00000566347 LCA10Q71F78 164 aa9.17□□□□□ -0.94
CLN6-207ENST00000566347 KRTAP6-3Q3LI67 103 aa9.16□□□□□ -0.94
CLN6-207ENST00000566347 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
CLN6-207ENST00000566347 ACYP1P07311 99 aa9.14□□□□□ -0.95
CLN6-207ENST00000566347 Q5VV11 94 aa9.1□□□□□ -0.95
CLN6-207ENST00000566347 SPRR2GQ9BYE4 73 aa9.1□□□□□ -0.95
CLN6-207ENST00000566347 MT1BP07438 61 aa9.07□□□□□ -0.96
CLN6-207ENST00000566347 A6NN06 94 aa9.06□□□□□ -0.96
CLN6-207ENST00000566347 KRTAP19-8Q3LI54 63 aa9.06□□□□□ -0.96
CLN6-207ENST00000566347 CYP4F30PQ9H0H9 118 aa9.06□□□□□ -0.96
CLN6-207ENST00000566347 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
CLN6-207ENST00000566347 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
CLN6-207ENST00000566347 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
CLN6-207ENST00000566347 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
CLN6-207ENST00000566347 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms