RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TRBV7-4A0A0J9YYF1 115 aa4.75□□□□□ -1.65
VPS9D1-205ENST00000565452 A0A1B0GW54 56 aa4.75□□□□□ -1.65
VPS9D1-205ENST00000565452 GTF2H5Q6ZYL4 71 aa4.75□□□□□ -1.65
VPS9D1-205ENST00000565452 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
VPS9D1-205ENST00000565452 NEBP20929 6669 aa4.74□□□□□ -1.65
VPS9D1-205ENST00000565452 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
VPS9D1-205ENST00000565452 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
VPS9D1-205ENST00000565452 K7EP34 96 aa4.72□□□□□ -1.65
VPS9D1-205ENST00000565452 CCKP06307 115 aa4.72□□□□□ -1.65
VPS9D1-205ENST00000565452 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
VPS9D1-205ENST00000565452 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
VPS9D1-205ENST00000565452 A0A1W2PNM2 257 aa4.71□□□□□ -1.66
VPS9D1-205ENST00000565452 F8W1H4 67 aa4.71□□□□□ -1.66
VPS9D1-205ENST00000565452 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
VPS9D1-205ENST00000565452 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
VPS9D1-205ENST00000565452 C1orf195Q5TG92 126 aa4.7□□□□□ -1.66
VPS9D1-205ENST00000565452 Q6ZQT0 140 aa4.69□□□□□ -1.66
VPS9D1-205ENST00000565452 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
VPS9D1-205ENST00000565452 A0A087WSZ3 146 aa4.68□□□□□ -1.66
VPS9D1-205ENST00000565452 MT2AP02795 61 aa4.68□□□□□ -1.66
VPS9D1-205ENST00000565452 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
VPS9D1-205ENST00000565452 A0A1B0GV72 72 aa4.67□□□□□ -1.66
VPS9D1-205ENST00000565452 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
VPS9D1-205ENST00000565452 SMCPP49901 116 aaPredicted RBP4.66□□□□□ -1.66
VPS9D1-205ENST00000565452 VPS25Q9BRG1 176 aa4.66□□□□□ -1.66
VPS9D1-205ENST00000565452 C14orf132Q9NPU4 83 aa4.66□□□□□ -1.66
VPS9D1-205ENST00000565452 MTURNQ8N3F0 131 aa4.65□□□□□ -1.67
VPS9D1-205ENST00000565452 J3KT08 172 aa4.64□□□□□ -1.67
VPS9D1-205ENST00000565452 ATP11AUNQ6ZP68 121 aa4.64□□□□□ -1.67
VPS9D1-205ENST00000565452 MT1FP04733 61 aa4.63□□□□□ -1.67
VPS9D1-205ENST00000565452 Q96NJ1 140 aa4.63□□□□□ -1.67
VPS9D1-205ENST00000565452 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
VPS9D1-205ENST00000565452 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
VPS9D1-205ENST00000565452 IGKV4-1P06312 121 aa4.61□□□□□ -1.67
VPS9D1-205ENST00000565452 NREPQ16612 68 aa4.61□□□□□ -1.67
VPS9D1-205ENST00000565452 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
VPS9D1-205ENST00000565452 NDUFB1O75438 58 aa4.59□□□□□ -1.67
VPS9D1-205ENST00000565452 A0A1B0GV90 55 aa4.58□□□□□ -1.68
VPS9D1-205ENST00000565452 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
VPS9D1-205ENST00000565452 LINC00313P59037 77 aa4.57□□□□□ -1.68
VPS9D1-205ENST00000565452 C8orf87E5RJ46 101 aa4.56□□□□□ -1.68
VPS9D1-205ENST00000565452 ACYP1P07311 99 aa4.56□□□□□ -1.68
VPS9D1-205ENST00000565452 DEFB116Q30KQ4 102 aa4.56□□□□□ -1.68
VPS9D1-205ENST00000565452 UBL5Q9BZL1 73 aa4.56□□□□□ -1.68
VPS9D1-205ENST00000565452 A0A1B0GVX0 72 aa4.55□□□□□ -1.68
VPS9D1-205ENST00000565452 A8MWP4 228 aa4.54□□□□□ -1.68
VPS9D1-205ENST00000565452 Q75L30 129 aa4.54□□□□□ -1.68
VPS9D1-205ENST00000565452 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
VPS9D1-205ENST00000565452 BPY2O14599 106 aa4.53□□□□□ -1.68
VPS9D1-205ENST00000565452 Q6ZVQ6 151 aa4.53□□□□□ -1.68
VPS9D1-205ENST00000565452 FAM240AA0A1B0GVK7 77 aa4.52□□□□□ -1.69
VPS9D1-205ENST00000565452 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
VPS9D1-205ENST00000565452 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
VPS9D1-205ENST00000565452 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
VPS9D1-205ENST00000565452 A8MUU9 505 aa4.51□□□□□ -1.69
VPS9D1-205ENST00000565452 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
VPS9D1-205ENST00000565452 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
VPS9D1-205ENST00000565452 J3QR89 54 aa4.5□□□□□ -1.69
VPS9D1-205ENST00000565452 DSCR10P59022 87 aa4.5□□□□□ -1.69
VPS9D1-205ENST00000565452 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
VPS9D1-205ENST00000565452 CXCL6P80162 114 aa4.48□□□□□ -1.69
VPS9D1-205ENST00000565452 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
VPS9D1-205ENST00000565452 MDN1Q9NU22 5596 aa4.48□□□□□ -1.69
VPS9D1-205ENST00000565452 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
VPS9D1-205ENST00000565452 NOTCH2NLQ7Z3S9 236 aa4.47□□□□□ -1.69
VPS9D1-205ENST00000565452 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
VPS9D1-205ENST00000565452 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
VPS9D1-205ENST00000565452 TMEM254Q8TBM7 123 aa4.46□□□□□ -1.7
VPS9D1-205ENST00000565452 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
VPS9D1-205ENST00000565452 K7EQZ3 153 aa4.45□□□□□ -1.7
VPS9D1-205ENST00000565452 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
VPS9D1-205ENST00000565452 KMT2DO14686 5537 aa4.44□□□□□ -1.7
VPS9D1-205ENST00000565452 MRPL34Q9BQ48 92 aaKnown RBP4.44□□□□□ -1.7
VPS9D1-205ENST00000565452 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
VPS9D1-205ENST00000565452 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
VPS9D1-205ENST00000565452 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
VPS9D1-205ENST00000565452 CASC2Q6XLA1 102 aa4.41□□□□□ -1.7
VPS9D1-205ENST00000565452 HCG22E2RYF7 251 aa4.4□□□□□ -1.71
VPS9D1-205ENST00000565452 K7ERU9 68 aa4.4□□□□□ -1.71
VPS9D1-205ENST00000565452 Q8N9L7 120 aa4.4□□□□□ -1.71
VPS9D1-205ENST00000565452 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
VPS9D1-205ENST00000565452 NDUFS5O43920 106 aa4.37□□□□□ -1.71
VPS9D1-205ENST00000565452 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
VPS9D1-205ENST00000565452 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
VPS9D1-205ENST00000565452 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
VPS9D1-205ENST00000565452 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
VPS9D1-205ENST00000565452 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
VPS9D1-205ENST00000565452 A6NN06 94 aa4.34□□□□□ -1.71
VPS9D1-205ENST00000565452 IMUPQ9GZP8 106 aa4.33□□□□□ -1.72
VPS9D1-205ENST00000565452 HRES1P13985 223 aa4.32□□□□□ -1.72
VPS9D1-205ENST00000565452 SPINK7P58062 85 aa4.31□□□□□ -1.72
VPS9D1-205ENST00000565452 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
VPS9D1-205ENST00000565452 KRTAP2-1Q9BYU5 128 aa4.3□□□□□ -1.72
VPS9D1-205ENST00000565452 Q5W150 140 aa4.29□□□□□ -1.72
VPS9D1-205ENST00000565452 UQCRQO14949 82 aa4.28□□□□□ -1.72
VPS9D1-205ENST00000565452 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
VPS9D1-205ENST00000565452 A0A087WVE0 104 aa4.26□□□□□ -1.73
VPS9D1-205ENST00000565452 TRAV22A0A0B4J277 110 aa4.25□□□□□ -1.73
VPS9D1-205ENST00000565452 ATOX1O00244 68 aa4.25□□□□□ -1.73
VPS9D1-205ENST00000565452 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms