RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 C9orf92A6NGG3 77 aa14.2□□□□□ -0.14
NME3-208ENST00000565379 XP32Q5T750 250 aa14.16□□□□□ -0.14
NME3-208ENST00000565379 NDUFB1O75438 58 aa14.15□□□□□ -0.14
NME3-208ENST00000565379 UBL5Q9BZL1 73 aa14.15□□□□□ -0.14
NME3-208ENST00000565379 Q6ZVQ6 151 aa14.13□□□□□ -0.15
NME3-208ENST00000565379 LINC00846Q9NV44 126 aa14.12□□□□□ -0.15
NME3-208ENST00000565379 A0A1B0GVX0 72 aa14.11□□□□□ -0.15
NME3-208ENST00000565379 A8MWP4 228 aa14.11□□□□□ -0.15
NME3-208ENST00000565379 ACYP1P07311 99 aa14.11□□□□□ -0.15
NME3-208ENST00000565379 LINC00313P59037 77 aa14.09□□□□□ -0.15
NME3-208ENST00000565379 C8orf87E5RJ46 101 aa14.08□□□□□ -0.16
NME3-208ENST00000565379 BPY2O14599 106 aa14.08□□□□□ -0.16
NME3-208ENST00000565379 IGHV6-1A0A0B4J1U7 121 aa14.07□□□□□ -0.16
NME3-208ENST00000565379 FAM240AA0A1B0GVK7 77 aa14.07□□□□□ -0.16
NME3-208ENST00000565379 KRTAP4-1Q9BYQ7 146 aa14.06□□□□□ -0.16
NME3-208ENST00000565379 SEC61BP60468 96 aaKnown RBP14.05□□□□□ -0.16
NME3-208ENST00000565379 DSCR10P59022 87 aa14.04□□□□□ -0.16
NME3-208ENST00000565379 PRR15Q8IV56 129 aa14.01□□□□□ -0.17
NME3-208ENST00000565379 IGKV3D-7A0A0C4DH55 119 aa14□□□□□ -0.17
NME3-208ENST00000565379 KRTAP9-6A0A140TA67 174 aa13.98□□□□□ -0.17
NME3-208ENST00000565379 RPL37P61927 97 aaKnown RBP13.98□□□□□ -0.17
NME3-208ENST00000565379 Q75L30 129 aa13.98□□□□□ -0.17
NME3-208ENST00000565379 J3QR89 54 aa13.97□□□□□ -0.17
NME3-208ENST00000565379 C20orf166-AS1Q96NR2 134 aa13.95□□□□□ -0.18
NME3-208ENST00000565379 NOTCH2NLQ7Z3S9 236 aa13.94□□□□□ -0.18
NME3-208ENST00000565379 C8orf17Q9NRJ1 99 aa13.93□□□□□ -0.18
NME3-208ENST00000565379 KRTAP16-1A8MUX0 517 aa13.92□□□□□ -0.18
NME3-208ENST00000565379 K7EQZ3 153 aa13.92□□□□□ -0.18
NME3-208ENST00000565379 A8MUU9 505 aa13.91□□□□□ -0.18
NME3-208ENST00000565379 CXCL6P80162 114 aa13.9□□□□□ -0.18
NME3-208ENST00000565379 ATP11AUNQ6ZP68 121 aa13.86□□□□□ -0.19
NME3-208ENST00000565379 PCOTHQ58A44 107 aa13.83□□□□□ -0.2
NME3-208ENST00000565379 ATP5EP2Q5VTU8 51 aa13.83□□□□□ -0.2
NME3-208ENST00000565379 MMP24-AS1A0A0U1RRL7 71 aa13.82□□□□□ -0.2
NME3-208ENST00000565379 Q8N9L7 120 aa13.8□□□□□ -0.2
NME3-208ENST00000565379 TMEM254Q8TBM7 123 aa13.8□□□□□ -0.2
NME3-208ENST00000565379 hDV103S1A0JD37 113 aa13.78□□□□□ -0.2
NME3-208ENST00000565379 Q8N9P0 234 aaPredicted RBP13.78□□□□□ -0.2
NME3-208ENST00000565379 LINC00643Q86TS7 51 aa13.77□□□□□ -0.21
NME3-208ENST00000565379 MRPL34Q9BQ48 92 aaKnown RBP13.75□□□□□ -0.21
NME3-208ENST00000565379 K7ERU9 68 aa13.71□□□□□ -0.21
NME3-208ENST00000565379 CASC2Q6XLA1 102 aa13.71□□□□□ -0.21
NME3-208ENST00000565379 HCG22E2RYF7 251 aa13.7□□□□□ -0.22
NME3-208ENST00000565379 LCE2DQ5TA82 110 aaPredicted RBP13.69□□□□□ -0.22
NME3-208ENST00000565379 WFDC13Q8IUB5 93 aa13.67□□□□□ -0.22
NME3-208ENST00000565379 LCE2CQ5TA81 110 aa13.66□□□□□ -0.22
NME3-208ENST00000565379 KRTAP19-2Q3LHN2 52 aa13.64□□□□□ -0.23
NME3-208ENST00000565379 ZCCHC13Q8WW36 166 aaKnown RBP13.62□□□□□ -0.23
NME3-208ENST00000565379 NDUFS5O43920 106 aa13.6□□□□□ -0.23
NME3-208ENST00000565379 HIST1H4AP62805 103 aaKnown RBP13.58□□□□□ -0.24
NME3-208ENST00000565379 CRCT1Q9UGL9 99 aa13.49□□□□□ -0.25
NME3-208ENST00000565379 TP53AIP1Q9HCN2 124 aa13.47□□□□□ -0.25
NME3-208ENST00000565379 MT1HP80294 61 aa13.46□□□□□ -0.25
NME3-208ENST00000565379 FSIP2Q5CZC0 6907 aa13.39□□□□□ -0.27
NME3-208ENST00000565379 A0A087WVE0 104 aa13.39□□□□□ -0.27
NME3-208ENST00000565379 IMUPQ9GZP8 106 aa13.38□□□□□ -0.27
NME3-208ENST00000565379 SPINK7P58062 85 aa13.35□□□□□ -0.27
NME3-208ENST00000565379 FLGP20930 4061 aaPredicted RBP13.34□□□□□ -0.27
NME3-208ENST00000565379 Q5W150 140 aa13.34□□□□□ -0.27
NME3-208ENST00000565379 MT-ATP8P03928 68 aa13.29□□□□□ -0.28
NME3-208ENST00000565379 UQCRQO14949 82 aa13.25□□□□□ -0.29
NME3-208ENST00000565379 HRES1P13985 223 aa13.24□□□□□ -0.29
NME3-208ENST00000565379 C7orf65Q6ZTY9 151 aa13.24□□□□□ -0.29
NME3-208ENST00000565379 RBM12B-AS1Q9P1G2 102 aa13.23□□□□□ -0.29
NME3-208ENST00000565379 LORP23490 312 aaPredicted RBP13.22□□□□□ -0.29
NME3-208ENST00000565379 COX6B2Q6YFQ2 88 aa13.21□□□□□ -0.29
NME3-208ENST00000565379 KRTAP10-6P60371 365 aaPredicted RBP13.2□□□□□ -0.3
NME3-208ENST00000565379 IGKV2D-30A0A075B6S6 120 aa13.19□□□□□ -0.3
NME3-208ENST00000565379 TRAV22A0A0B4J277 110 aa13.19□□□□□ -0.3
NME3-208ENST00000565379 IGKV2-30P06310 120 aa13.19□□□□□ -0.3
NME3-208ENST00000565379 MPLKIPQ8TAP9 179 aa13.19□□□□□ -0.3
NME3-208ENST00000565379 SCGB1A1P11684 91 aa13.17□□□□□ -0.3
NME3-208ENST00000565379 M0R2T5 61 aa13.14□□□□□ -0.31
NME3-208ENST00000565379 ATOX1O00244 68 aa13.13□□□□□ -0.31
NME3-208ENST00000565379 OCR1Q9BZK8 76 aa13.13□□□□□ -0.31
NME3-208ENST00000565379 FAM236DA0A1B0GTK5 79 aa13.09□□□□□ -0.31
NME3-208ENST00000565379 FAM236CP0DP71 79 aa13.09□□□□□ -0.31
NME3-208ENST00000565379 LOC101927531A0A1B0GV80 90 aa13.08□□□□□ -0.32
NME3-208ENST00000565379 H0Y9P7 68 aa13.06□□□□□ -0.32
NME3-208ENST00000565379 FAM236AA0A1B0GUQ0 79 aa13.04□□□□□ -0.32
NME3-208ENST00000565379 FAM236BA0A1B0GV22 79 aa13.04□□□□□ -0.32
NME3-208ENST00000565379 C5orf47Q569G3 176 aa13.04□□□□□ -0.32
NME3-208ENST00000565379 SMIM20Q8N5G0 67 aa13.04□□□□□ -0.32
NME3-208ENST00000565379 MP68P56378 58 aa13.02□□□□□ -0.33
NME3-208ENST00000565379 CYP4F30PQ9H0H9 118 aa13□□□□□ -0.33
NME3-208ENST00000565379 H3BPC8 53 aa12.96□□□□□ -0.33
NME3-208ENST00000565379 C1orf64Q8NEQ6 169 aa12.94□□□□□ -0.34
NME3-208ENST00000565379 TRAV7A0A075B6U4 112 aa12.91□□□□□ -0.34
NME3-208ENST00000565379 LINC00208Q96KT6 92 aa12.91□□□□□ -0.34
NME3-208ENST00000565379 C4orf26Q17RF5 130 aa12.88□□□□□ -0.35
NME3-208ENST00000565379 H1FX-AS1Q4G0G2 97 aa12.83□□□□□ -0.36
NME3-208ENST00000565379 SERP2Q8N6R1 65 aa12.74□□□□□ -0.37
NME3-208ENST00000565379 KRTAP9-8Q9BYQ0 159 aa12.72□□□□□ -0.37
NME3-208ENST00000565379 KLKP1Q107X0 134 aa12.7□□□□□ -0.38
NME3-208ENST00000565379 KRTAP3-1Q9BYR8 98 aa12.68□□□□□ -0.38
NME3-208ENST00000565379 USH2AO75445 5202 aa12.64□□□□□ -0.39
NME3-208ENST00000565379 A8MUN3 132 aa12.62□□□□□ -0.39
NME3-208ENST00000565379 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.56□□□□□ -0.4
NME3-208ENST00000565379 SSPOA2VEC9 5147 aa12.56□□□□□ -0.4
NME3-208ENST00000565379 MT2AP02795 61 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms