RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
SLX1A-204ENST00000563995 SEC61BP60468 96 aaKnown RBP10.55□□□□□ -0.72
SLX1A-204ENST00000563995 DEFB116Q30KQ4 102 aa10.54□□□□□ -0.72
SLX1A-204ENST00000563995 KRTAP4-1Q9BYQ7 146 aa10.53□□□□□ -0.72
SLX1A-204ENST00000563995 F8W1H4 67 aa10.49□□□□□ -0.73
SLX1A-204ENST00000563995 J3KT08 172 aa10.48□□□□□ -0.73
SLX1A-204ENST00000563995 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
SLX1A-204ENST00000563995 DSCR10P59022 87 aa10.46□□□□□ -0.73
SLX1A-204ENST00000563995 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.44□□□□□ -0.74
SLX1A-204ENST00000563995 NREPQ16612 68 aa10.44□□□□□ -0.74
SLX1A-204ENST00000563995 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
SLX1A-204ENST00000563995 LINC00313P59037 77 aa10.43□□□□□ -0.74
SLX1A-204ENST00000563995 IGHV6-1A0A0B4J1U7 121 aa10.42□□□□□ -0.74
SLX1A-204ENST00000563995 Q75L30 129 aa10.42□□□□□ -0.74
SLX1A-204ENST00000563995 A0A1B0GVX0 72 aa10.41□□□□□ -0.74
SLX1A-204ENST00000563995 ETDBQ3ZM63 59 aa10.39□□□□□ -0.75
SLX1A-204ENST00000563995 NOTCH2NLQ7Z3S9 236 aa10.39□□□□□ -0.75
SLX1A-204ENST00000563995 C20orf166-AS1Q96NR2 134 aa10.39□□□□□ -0.75
SLX1A-204ENST00000563995 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
SLX1A-204ENST00000563995 A8MUU9 505 aa10.37□□□□□ -0.75
SLX1A-204ENST00000563995 A8MWP4 228 aa10.37□□□□□ -0.75
SLX1A-204ENST00000563995 NDUFB1O75438 58 aa10.37□□□□□ -0.75
SLX1A-204ENST00000563995 KRTAP16-1A8MUX0 517 aa10.36□□□□□ -0.75
SLX1A-204ENST00000563995 LCE2CQ5TA81 110 aa10.36□□□□□ -0.75
SLX1A-204ENST00000563995 A0A1B0GV90 55 aa10.34□□□□□ -0.75
SLX1A-204ENST00000563995 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
SLX1A-204ENST00000563995 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SLX1A-204ENST00000563995 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
SLX1A-204ENST00000563995 KRTAP19-2Q3LHN2 52 aa10.31□□□□□ -0.76
SLX1A-204ENST00000563995 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
SLX1A-204ENST00000563995 LINC00846Q9NV44 126 aa10.3□□□□□ -0.76
SLX1A-204ENST00000563995 BPY2O14599 106 aa10.29□□□□□ -0.76
SLX1A-204ENST00000563995 UBL5Q9BZL1 73 aa10.28□□□□□ -0.76
SLX1A-204ENST00000563995 C8orf17Q9NRJ1 99 aa10.28□□□□□ -0.76
SLX1A-204ENST00000563995 K7EQZ3 153 aa10.24□□□□□ -0.77
SLX1A-204ENST00000563995 MT1HP80294 61 aa10.24□□□□□ -0.77
SLX1A-204ENST00000563995 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
SLX1A-204ENST00000563995 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
SLX1A-204ENST00000563995 Q8N9L7 120 aa10.16□□□□□ -0.78
SLX1A-204ENST00000563995 TMEM254Q8TBM7 123 aa10.15□□□□□ -0.78
SLX1A-204ENST00000563995 ACYP1P07311 99 aa10.14□□□□□ -0.79
SLX1A-204ENST00000563995 LORP23490 312 aaPredicted RBP10.14□□□□□ -0.79
SLX1A-204ENST00000563995 FAM240AA0A1B0GVK7 77 aa10.13□□□□□ -0.79
SLX1A-204ENST00000563995 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
SLX1A-204ENST00000563995 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
SLX1A-204ENST00000563995 KRTAP10-6P60371 365 aaPredicted RBP10.1□□□□□ -0.79
SLX1A-204ENST00000563995 ZCCHC13Q8WW36 166 aaKnown RBP10.1□□□□□ -0.79
SLX1A-204ENST00000563995 CXCL6P80162 114 aa10.09□□□□□ -0.79
SLX1A-204ENST00000563995 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
SLX1A-204ENST00000563995 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
SLX1A-204ENST00000563995 HCG22E2RYF7 251 aa10.02□□□□□ -0.81
SLX1A-204ENST00000563995 NDUFS5O43920 106 aa10.02□□□□□ -0.81
SLX1A-204ENST00000563995 FLGP20930 4061 aaPredicted RBP9.98□□□□□ -0.81
SLX1A-204ENST00000563995 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
SLX1A-204ENST00000563995 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.82
SLX1A-204ENST00000563995 SSPOA2VEC9 5147 aa9.94□□□□□ -0.82
SLX1A-204ENST00000563995 J3QR89 54 aa9.94□□□□□ -0.82
SLX1A-204ENST00000563995 M0R2T5 61 aa9.93□□□□□ -0.82
SLX1A-204ENST00000563995 HRES1P13985 223 aa9.93□□□□□ -0.82
SLX1A-204ENST00000563995 SPINK7P58062 85 aa9.92□□□□□ -0.82
SLX1A-204ENST00000563995 LINC00643Q86TS7 51 aa9.92□□□□□ -0.82
SLX1A-204ENST00000563995 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.82
SLX1A-204ENST00000563995 USH2AO75445 5202 aa9.89□□□□□ -0.83
SLX1A-204ENST00000563995 Q5W150 140 aa9.89□□□□□ -0.83
SLX1A-204ENST00000563995 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
SLX1A-204ENST00000563995 FCGBPQ9Y6R7 5405 aaPredicted RBP9.87□□□□□ -0.83
SLX1A-204ENST00000563995 HIST1H4AP62805 103 aaKnown RBP9.85□□□□□ -0.83
SLX1A-204ENST00000563995 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
SLX1A-204ENST00000563995 MACF1Q9UPN3 7388 aaKnown RBP9.82□□□□□ -0.84
SLX1A-204ENST00000563995 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
SLX1A-204ENST00000563995 FAM236DA0A1B0GTK5 79 aa9.8□□□□□ -0.84
SLX1A-204ENST00000563995 FAM236CP0DP71 79 aa9.8□□□□□ -0.84
SLX1A-204ENST00000563995 IGKV2D-30A0A075B6S6 120 aa9.78□□□□□ -0.84
SLX1A-204ENST00000563995 IGKV2-30P06310 120 aa9.78□□□□□ -0.84
SLX1A-204ENST00000563995 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
SLX1A-204ENST00000563995 A0A087WVE0 104 aa9.76□□□□□ -0.85
SLX1A-204ENST00000563995 K7ERU9 68 aa9.74□□□□□ -0.85
SLX1A-204ENST00000563995 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
SLX1A-204ENST00000563995 UQCRQO14949 82 aa9.63□□□□□ -0.87
SLX1A-204ENST00000563995 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
SLX1A-204ENST00000563995 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
SLX1A-204ENST00000563995 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
SLX1A-204ENST00000563995 C4orf26Q17RF5 130 aa9.56□□□□□ -0.88
SLX1A-204ENST00000563995 IMUPQ9GZP8 106 aa9.56□□□□□ -0.88
SLX1A-204ENST00000563995 LOC101927531A0A1B0GV80 90 aa9.55□□□□□ -0.88
SLX1A-204ENST00000563995 H0Y9P7 68 aa9.55□□□□□ -0.88
SLX1A-204ENST00000563995 OCR1Q9BZK8 76 aa9.55□□□□□ -0.88
SLX1A-204ENST00000563995 ATOX1O00244 68 aa9.54□□□□□ -0.88
SLX1A-204ENST00000563995 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
SLX1A-204ENST00000563995 CYP4F30PQ9H0H9 118 aa9.54□□□□□ -0.88
SLX1A-204ENST00000563995 SCGB1A1P11684 91 aa9.48□□□□□ -0.89
SLX1A-204ENST00000563995 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
SLX1A-204ENST00000563995 KRTAP3-1Q9BYR8 98 aa9.44□□□□□ -0.9
SLX1A-204ENST00000563995 MT2AP02795 61 aa9.43□□□□□ -0.9
SLX1A-204ENST00000563995 MP68P56378 58 aa9.43□□□□□ -0.9
SLX1A-204ENST00000563995 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
SLX1A-204ENST00000563995 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
SLX1A-204ENST00000563995 LCE2BO14633 110 aa9.41□□□□□ -0.9
SLX1A-204ENST00000563995 KRTAP6-3Q3LI67 103 aa9.41□□□□□ -0.9
SLX1A-204ENST00000563995 NEBP20929 6669 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms