RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 LOC110117498A0A087WWA1 95 aa15.85■□□□□ 0.13
CMTM4-204ENST00000563952 C14orf132Q9NPU4 83 aa15.83■□□□□ 0.12
CMTM4-204ENST00000563952 J3KT08 172 aa15.82■□□□□ 0.12
CMTM4-204ENST00000563952 C8orf87E5RJ46 101 aa15.81■□□□□ 0.12
CMTM4-204ENST00000563952 C9orf118A6NHY6 69 aa15.79■□□□□ 0.12
CMTM4-204ENST00000563952 PDE6GP18545 87 aa15.79■□□□□ 0.12
CMTM4-204ENST00000563952 KRTAP10-6P60371 365 aaPredicted RBP15.79■□□□□ 0.12
CMTM4-204ENST00000563952 LCE2DQ5TA82 110 aaPredicted RBP15.78■□□□□ 0.12
CMTM4-204ENST00000563952 A0A1B0GW54 56 aa15.75■□□□□ 0.11
CMTM4-204ENST00000563952 TAX1BP3O14907 124 aa15.75■□□□□ 0.11
CMTM4-204ENST00000563952 LORP23490 312 aaPredicted RBP15.75■□□□□ 0.11
CMTM4-204ENST00000563952 FLGP20930 4061 aaPredicted RBP15.74■□□□□ 0.11
CMTM4-204ENST00000563952 A0A1W2PPM0 123 aa15.72■□□□□ 0.11
CMTM4-204ENST00000563952 FSIP2Q5CZC0 6907 aa15.72■□□□□ 0.11
CMTM4-204ENST00000563952 NDUFB1O75438 58 aa15.71■□□□□ 0.11
CMTM4-204ENST00000563952 MTURNQ8N3F0 131 aa15.68■□□□□ 0.1
CMTM4-204ENST00000563952 H3BT86 120 aa15.65■□□□□ 0.1
CMTM4-204ENST00000563952 A8MWP4 228 aa15.64■□□□□ 0.09
CMTM4-204ENST00000563952 CRCT1Q9UGL9 99 aa15.64■□□□□ 0.09
CMTM4-204ENST00000563952 NREPQ16612 68 aa15.61■□□□□ 0.09
CMTM4-204ENST00000563952 C8orf17Q9NRJ1 99 aa15.59■□□□□ 0.09
CMTM4-204ENST00000563952 IGKV3D-7A0A0C4DH55 119 aa15.58■□□□□ 0.08
CMTM4-204ENST00000563952 ZCCHC13Q8WW36 166 aaKnown RBP15.56■□□□□ 0.08
CMTM4-204ENST00000563952 FAM236DA0A1B0GTK5 79 aa15.55■□□□□ 0.08
CMTM4-204ENST00000563952 FAM236CP0DP71 79 aa15.55■□□□□ 0.08
CMTM4-204ENST00000563952 HRES1P13985 223 aa15.53■□□□□ 0.08
CMTM4-204ENST00000563952 SPCS1Q9Y6A9 102 aa15.53■□□□□ 0.08
CMTM4-204ENST00000563952 Q8N9P0 234 aaPredicted RBP15.51■□□□□ 0.07
CMTM4-204ENST00000563952 RBM12B-AS1Q9P1G2 102 aa15.5■□□□□ 0.07
CMTM4-204ENST00000563952 PRR15Q8IV56 129 aa15.49■□□□□ 0.07
CMTM4-204ENST00000563952 Q6ZVQ6 151 aa15.46■□□□□ 0.07
CMTM4-204ENST00000563952 MPLKIPQ8TAP9 179 aa15.46■□□□□ 0.07
CMTM4-204ENST00000563952 COL5A1-AS1Q5SY13 56 aa15.42■□□□□ 0.06
CMTM4-204ENST00000563952 SPINK7P58062 85 aa15.4■□□□□ 0.06
CMTM4-204ENST00000563952 MMP24-AS1A0A0U1RRL7 71 aa15.38■□□□□ 0.05
CMTM4-204ENST00000563952 K7EQZ3 153 aa15.37■□□□□ 0.05
CMTM4-204ENST00000563952 SMCPP49901 116 aaPredicted RBP15.37■□□□□ 0.05
CMTM4-204ENST00000563952 BPY2O14599 106 aa15.33■□□□□ 0.04
CMTM4-204ENST00000563952 TMEM254Q8TBM7 123 aa15.33■□□□□ 0.04
CMTM4-204ENST00000563952 MRPL34Q9BQ48 92 aaKnown RBP15.33■□□□□ 0.04
CMTM4-204ENST00000563952 hDV103S1A0JD37 113 aa15.29■□□□□ 0.04
CMTM4-204ENST00000563952 K7EP34 96 aa15.27■□□□□ 0.04
CMTM4-204ENST00000563952 KRTAP9-8Q9BYQ0 159 aa15.25■□□□□ 0.03
CMTM4-204ENST00000563952 PRO0461Q9UI25 63 aa15.25■□□□□ 0.03
CMTM4-204ENST00000563952 NDUFS5O43920 106 aa15.24■□□□□ 0.03
CMTM4-204ENST00000563952 WFDC13Q8IUB5 93 aa15.2■□□□□ 0.02
CMTM4-204ENST00000563952 Q8N9L7 120 aa15.19■□□□□ 0.02
CMTM4-204ENST00000563952 PCP4L1A6NKN8 68 aa15.16■□□□□ 0.02
CMTM4-204ENST00000563952 LINC00846Q9NV44 126 aa15.12■□□□□ 0.01
CMTM4-204ENST00000563952 GTF2H5Q6ZYL4 71 aa15.1■□□□□ 0.01
CMTM4-204ENST00000563952 UBL5Q9BZL1 73 aa15.1■□□□□ 0.01
CMTM4-204ENST00000563952 CASC2Q6XLA1 102 aa15.09■□□□□ 0.01
CMTM4-204ENST00000563952 MT2AP02795 61 aa15.07■□□□□ 0
CMTM4-204ENST00000563952 HCG22E2RYF7 251 aa15.01□□□□□ -0.01
CMTM4-204ENST00000563952 Q5W150 140 aa15.01□□□□□ -0.01
CMTM4-204ENST00000563952 IGKV2D-30A0A075B6S6 120 aa14.99□□□□□ -0.01
CMTM4-204ENST00000563952 IGKV2-30P06310 120 aa14.99□□□□□ -0.01
CMTM4-204ENST00000563952 F8W1H4 67 aa14.97□□□□□ -0.01
CMTM4-204ENST00000563952 MT1FP04733 61 aa14.96□□□□□ -0.01
CMTM4-204ENST00000563952 ETDBQ3ZM63 59 aa14.92□□□□□ -0.02
CMTM4-204ENST00000563952 C7orf65Q6ZTY9 151 aa14.92□□□□□ -0.02
CMTM4-204ENST00000563952 KRTAP10-10P60014 251 aa14.91□□□□□ -0.02
CMTM4-204ENST00000563952 CXCL6P80162 114 aa14.88□□□□□ -0.03
CMTM4-204ENST00000563952 H1FX-AS1Q4G0G2 97 aa14.84□□□□□ -0.03
CMTM4-204ENST00000563952 KRTAP9-3Q9BYQ3 159 aa14.77□□□□□ -0.05
CMTM4-204ENST00000563952 USH2AO75445 5202 aa14.76□□□□□ -0.05
CMTM4-204ENST00000563952 C4orf26Q17RF5 130 aa14.7□□□□□ -0.06
CMTM4-204ENST00000563952 LCE2BO14633 110 aa14.69□□□□□ -0.06
CMTM4-204ENST00000563952 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.63□□□□□ -0.07
CMTM4-204ENST00000563952 TP53AIP1Q9HCN2 124 aa14.62□□□□□ -0.07
CMTM4-204ENST00000563952 SSPOA2VEC9 5147 aa14.61□□□□□ -0.07
CMTM4-204ENST00000563952 KRTAP9-7A8MTY7 169 aa14.6□□□□□ -0.07
CMTM4-204ENST00000563952 ACYP1P07311 99 aa14.56□□□□□ -0.08
CMTM4-204ENST00000563952 FAM240AA0A1B0GVK7 77 aa14.48□□□□□ -0.09
CMTM4-204ENST00000563952 KRTAP3-1Q9BYR8 98 aa14.45□□□□□ -0.1
CMTM4-204ENST00000563952 C1orf64Q8NEQ6 169 aa14.44□□□□□ -0.1
CMTM4-204ENST00000563952 ATP5EP2Q5VTU8 51 aa14.42□□□□□ -0.1
CMTM4-204ENST00000563952 KRTAP19-1Q8IUB9 90 aa14.41□□□□□ -0.1
CMTM4-204ENST00000563952 C5orf47Q569G3 176 aa14.39□□□□□ -0.11
CMTM4-204ENST00000563952 HIST1H4AP62805 103 aaKnown RBP14.38□□□□□ -0.11
CMTM4-204ENST00000563952 S4R3F8 94 aa14.36□□□□□ -0.11
CMTM4-204ENST00000563952 FCGBPQ9Y6R7 5405 aaPredicted RBP14.34□□□□□ -0.11
CMTM4-204ENST00000563952 TRAV22A0A0B4J277 110 aa14.33□□□□□ -0.12
CMTM4-204ENST00000563952 CYP4F30PQ9H0H9 118 aa14.32□□□□□ -0.12
CMTM4-204ENST00000563952 A0A1B0GV90 55 aa14.3□□□□□ -0.12
CMTM4-204ENST00000563952 LCA10Q71F78 164 aa14.26□□□□□ -0.13
CMTM4-204ENST00000563952 LOC101927531A0A1B0GV80 90 aa14.24□□□□□ -0.13
CMTM4-204ENST00000563952 CSAG1Q6PB30 78 aa14.22□□□□□ -0.13
CMTM4-204ENST00000563952 LINC00643Q86TS7 51 aa14.22□□□□□ -0.13
CMTM4-204ENST00000563952 UQCRQO14949 82 aa14.2□□□□□ -0.14
CMTM4-204ENST00000563952 A0A087WVE0 104 aa14.19□□□□□ -0.14
CMTM4-204ENST00000563952 FAM236AA0A1B0GUQ0 79 aa14.18□□□□□ -0.14
CMTM4-204ENST00000563952 FAM236BA0A1B0GV22 79 aa14.18□□□□□ -0.14
CMTM4-204ENST00000563952 H0Y9P7 68 aa14.15□□□□□ -0.14
CMTM4-204ENST00000563952 KRTAP19-6Q3LI70 58 aa14.13□□□□□ -0.15
CMTM4-204ENST00000563952 ATOX1O00244 68 aa14.1□□□□□ -0.15
CMTM4-204ENST00000563952 KRTAP3-3Q9BYR6 98 aa14.03□□□□□ -0.16
CMTM4-204ENST00000563952 MACF1Q9UPN3 7388 aaKnown RBP13.98□□□□□ -0.17
CMTM4-204ENST00000563952 J3QR89 54 aa13.93□□□□□ -0.18
CMTM4-204ENST00000563952 LINC00208Q96KT6 92 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms