RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, human

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-222	ENST00000561212	KLKP1	Q107X0	134 aa		4.46	□□□□□ -1.7
ZEB1-222	ENST00000561212	LINC00472	Q9H8W2	130 aa		4.46	□□□□□ -1.7
ZEB1-222	ENST00000561212	C20orf197	Q8N268	126 aa		4.45	□□□□□ -1.7
ZEB1-222	ENST00000561212	IGLV9-49	A0A0B4J1Y8	123 aa		4.44	□□□□□ -1.7
ZEB1-222	ENST00000561212	HCG22	E2RYF7	251 aa		4.44	□□□□□ -1.7
ZEB1-222	ENST00000561212		A8MWP4	228 aa		4.43	□□□□□ -1.7
ZEB1-222	ENST00000561212		J3KT08	172 aa		4.43	□□□□□ -1.7
ZEB1-222	ENST00000561212	MOBP	Q13875	183 aa		4.42	□□□□□ -1.7
ZEB1-222	ENST00000561212	PRR15	Q8IV56	129 aa		4.42	□□□□□ -1.7
ZEB1-222	ENST00000561212	FAT1	Q14517	4588 aa		4.42	□□□□□ -1.7
ZEB1-222	ENST00000561212		H7BZZ5	65 aa		4.41	□□□□□ -1.7
ZEB1-222	ENST00000561212	NDUFC1	O43677	76 aa		4.41	□□□□□ -1.7
ZEB1-222	ENST00000561212	KRTAP10-4	P60372	401 aa	Predicted RBP	4.41	□□□□□ -1.7
ZEB1-222	ENST00000561212	DEFB116	Q30KQ4	102 aa		4.41	□□□□□ -1.7
ZEB1-222	ENST00000561212	TMEM254	Q8TBM7	123 aa		4.41	□□□□□ -1.7
ZEB1-222	ENST00000561212		A0A0U1RQV1	116 aa		4.4	□□□□□ -1.71
ZEB1-222	ENST00000561212	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.4	□□□□□ -1.71
ZEB1-222	ENST00000561212	RPS28	P62857	69 aa	Known RBP	4.4	□□□□□ -1.71
ZEB1-222	ENST00000561212		Q96NJ1	140 aa		4.4	□□□□□ -1.71
ZEB1-222	ENST00000561212	HSPG2	P98160	4391 aa		4.4	□□□□□ -1.71
ZEB1-222	ENST00000561212	CD164	Q04900	197 aa		4.39	□□□□□ -1.71
ZEB1-222	ENST00000561212	ANAPC11	Q9NYG5	84 aa		4.39	□□□□□ -1.71
ZEB1-222	ENST00000561212	SNURF	Q9Y675	71 aa		4.39	□□□□□ -1.71
ZEB1-222	ENST00000561212	SSBP3-AS1	Q7Z2R9	100 aa		4.38	□□□□□ -1.71
ZEB1-222	ENST00000561212	FAM236D	A0A1B0GTK5	79 aa		4.37	□□□□□ -1.71
ZEB1-222	ENST00000561212	NDUFB1	O75438	58 aa		4.37	□□□□□ -1.71
ZEB1-222	ENST00000561212	FAM236C	P0DP71	79 aa		4.37	□□□□□ -1.71
ZEB1-222	ENST00000561212	C5orf47	Q569G3	176 aa		4.37	□□□□□ -1.71
ZEB1-222	ENST00000561212	CASC2	Q6XLA1	102 aa		4.37	□□□□□ -1.71
ZEB1-222	ENST00000561212	EPPK1	P58107	5090 aa	Known RBP	4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	KRTAP1-4	P0C5Y4	121 aa		4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	ATP5E	P56381	51 aa	Predicted RBP	4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	FAM229B	Q4G0N7	80 aa		4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	HRCT1	Q6UXD1	115 aa		4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	WFDC13	Q8IUB5	93 aa		4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	MMP24-AS1	A0A0U1RRL7	71 aa		4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	ZCCHC13	Q8WW36	166 aa	Known RBP	4.36	□□□□□ -1.71
ZEB1-222	ENST00000561212	ASB16-AS1	Q495Z4	193 aa		4.35	□□□□□ -1.71
ZEB1-222	ENST00000561212	PKHD1L1	Q86WI1	4243 aa		4.34	□□□□□ -1.71
ZEB1-222	ENST00000561212	RYR1	P21817	5038 aa		4.34	□□□□□ -1.71
ZEB1-222	ENST00000561212		A0A1B0GVX0	72 aa		4.34	□□□□□ -1.71
ZEB1-222	ENST00000561212	CDK2AP2	O75956	126 aa		4.34	□□□□□ -1.71
ZEB1-222	ENST00000561212	SMR3B	P02814	79 aa	Predicted RBP	4.34	□□□□□ -1.71
ZEB1-222	ENST00000561212	KIAA1109	Q2LD37	5005 aa		4.33	□□□□□ -1.72
ZEB1-222	ENST00000561212	hDV103S1	A0JD37	113 aa		4.33	□□□□□ -1.72
ZEB1-222	ENST00000561212		A0A087X002	238 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212		H3BPC8	53 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212	MP68	P56378	58 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212	KRTAP13-2	Q52LG2	175 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212		Q5XG85	94 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212	C8orf17	Q9NRJ1	99 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212	SERP1	Q9Y6X1	66 aa		4.32	□□□□□ -1.72
ZEB1-222	ENST00000561212	SPINK6	Q6UWN8	80 aa		4.31	□□□□□ -1.72
ZEB1-222	ENST00000561212	TP53AIP1	Q9HCN2	124 aa		4.31	□□□□□ -1.72
ZEB1-222	ENST00000561212	IGHV6-1	A0A0B4J1U7	121 aa		4.3	□□□□□ -1.72
ZEB1-222	ENST00000561212	OXT	P01178	125 aa		4.3	□□□□□ -1.72
ZEB1-222	ENST00000561212		H0Y9P7	68 aa		4.29	□□□□□ -1.72
ZEB1-222	ENST00000561212	TRAV22	A0A0B4J277	110 aa		4.28	□□□□□ -1.72
ZEB1-222	ENST00000561212	C8orf87	E5RJ46	101 aa		4.27	□□□□□ -1.73
ZEB1-222	ENST00000561212	MRPL34	Q9BQ48	92 aa	Known RBP	4.27	□□□□□ -1.73
ZEB1-222	ENST00000561212	LINC00208	Q96KT6	92 aa		4.26	□□□□□ -1.73
ZEB1-222	ENST00000561212	LIMD2	Q9BT23	127 aa		4.26	□□□□□ -1.73
ZEB1-222	ENST00000561212	LRP1	Q07954	4544 aa	Known RBP	4.26	□□□□□ -1.73
ZEB1-222	ENST00000561212	C1orf195	Q5TG92	126 aa		4.26	□□□□□ -1.73
ZEB1-222	ENST00000561212	NOTCH2NL	Q7Z3S9	236 aa		4.26	□□□□□ -1.73
ZEB1-222	ENST00000561212	C1orf64	Q8NEQ6	169 aa		4.25	□□□□□ -1.73
ZEB1-222	ENST00000561212	CYP4F30P	Q9H0H9	118 aa		4.25	□□□□□ -1.73
ZEB1-222	ENST00000561212	TNXB	P22105	4242 aa		4.25	□□□□□ -1.73
ZEB1-222	ENST00000561212	SPINK1	P00995	79 aa		4.24	□□□□□ -1.73
ZEB1-222	ENST00000561212		Q5VSD8	79 aa		4.24	□□□□□ -1.73
ZEB1-222	ENST00000561212	SPANXA2-OT1	Q8N9U9	137 aa		4.24	□□□□□ -1.73
ZEB1-222	ENST00000561212	TYMSOS	Q8TAI1	123 aa		4.24	□□□□□ -1.73
ZEB1-222	ENST00000561212	RPS29	P62273	56 aa	Known RBP	4.23	□□□□□ -1.73
ZEB1-222	ENST00000561212		Q8N1X5	172 aa		4.23	□□□□□ -1.73
ZEB1-222	ENST00000561212	PRR26	Q8N8Z3	221 aa		4.23	□□□□□ -1.73
ZEB1-222	ENST00000561212	SMIM26	A0A096LP01	95 aa		4.22	□□□□□ -1.73
ZEB1-222	ENST00000561212	NDUFS5	O43920	106 aa		4.22	□□□□□ -1.73
ZEB1-222	ENST00000561212	FAT3	Q8TDW7	4589 aa		4.22	□□□□□ -1.73
ZEB1-222	ENST00000561212	LINC00313	P59037	77 aa		4.21	□□□□□ -1.73
ZEB1-222	ENST00000561212	SPAG11A	Q6PDA7	123 aa		4.21	□□□□□ -1.73
ZEB1-222	ENST00000561212	KRTAP3-1	Q9BYR8	98 aa		4.21	□□□□□ -1.73
ZEB1-222	ENST00000561212	MYCBP2	O75592	4640 aa		4.21	□□□□□ -1.74
ZEB1-222	ENST00000561212	KRTAP10-8	P60410	259 aa		4.21	□□□□□ -1.74
ZEB1-222	ENST00000561212	KRTAP13-3	Q3SY46	172 aa		4.21	□□□□□ -1.74
ZEB1-222	ENST00000561212		Q8N9P0	234 aa	Predicted RBP	4.2	□□□□□ -1.74
ZEB1-222	ENST00000561212	LINC00304	Q8N9R0	145 aa		4.2	□□□□□ -1.74
ZEB1-222	ENST00000561212	FLG2	Q5D862	2391 aa	Predicted RBP	4.2	□□□□□ -1.74
ZEB1-222	ENST00000561212	LOC101927531	A0A1B0GV80	90 aa		4.19	□□□□□ -1.74
ZEB1-222	ENST00000561212	IGLV7-46	A0A075B6I9	117 aa		4.18	□□□□□ -1.74
ZEB1-222	ENST00000561212	KRTAP16-1	A8MUX0	517 aa		4.18	□□□□□ -1.74
ZEB1-222	ENST00000561212	FP248	Q71RG6	208 aa	Predicted RBP	4.18	□□□□□ -1.74
ZEB1-222	ENST00000561212	BIRC6	Q9NR09	4857 aa		4.17	□□□□□ -1.74
ZEB1-222	ENST00000561212		Q5W150	140 aa		4.17	□□□□□ -1.74
ZEB1-222	ENST00000561212	MT1HL1	P0DM35	61 aa		4.16	□□□□□ -1.74
ZEB1-222	ENST00000561212	PRR4	Q16378	134 aa		4.16	□□□□□ -1.74
ZEB1-222	ENST00000561212	HERC2	O95714	4834 aa		4.16	□□□□□ -1.74
ZEB1-222	ENST00000561212	C4orf26	Q17RF5	130 aa		4.15	□□□□□ -1.75
ZEB1-222	ENST00000561212	PCOTH	Q58A44	107 aa		4.15	□□□□□ -1.75
ZEB1-222	ENST00000561212	SEC61G	P60059	68 aa		4.14	□□□□□ -1.75
ZEB1-222	ENST00000561212	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 75 ms