RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 DNAL4O96015 105 aa8.56□□□□□ -1.04
TPM1-226ENST00000560959 HIST3H2BBQ8N257 126 aa8.56□□□□□ -1.04
TPM1-226ENST00000560959 PRO1854Q9UHT4 67 aa8.56□□□□□ -1.04
TPM1-226ENST00000560959 A0A1B0GV72 72 aa8.55□□□□□ -1.04
TPM1-226ENST00000560959 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
TPM1-226ENST00000560959 S100A2P29034 98 aa8.54□□□□□ -1.04
TPM1-226ENST00000560959 TRIAP1O43715 76 aa8.53□□□□□ -1.04
TPM1-226ENST00000560959 MDN1Q9NU22 5596 aa8.53□□□□□ -1.04
TPM1-226ENST00000560959 KRTAP5-9P26371 169 aa8.52□□□□□ -1.05
TPM1-226ENST00000560959 C21orf62-AS1Q17RA5 79 aa8.52□□□□□ -1.05
TPM1-226ENST00000560959 LYRM7Q5U5X0 104 aa8.52□□□□□ -1.05
TPM1-226ENST00000560959 NDUFB1O75438 58 aa8.51□□□□□ -1.05
TPM1-226ENST00000560959 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
TPM1-226ENST00000560959 DSCR8Q96T75 97 aa8.51□□□□□ -1.05
TPM1-226ENST00000560959 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
TPM1-226ENST00000560959 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
TPM1-226ENST00000560959 A6NJY4 79 aa8.48□□□□□ -1.05
TPM1-226ENST00000560959 KMT2DO14686 5537 aa8.47□□□□□ -1.05
TPM1-226ENST00000560959 CEND1Q8N111 149 aa8.47□□□□□ -1.05
TPM1-226ENST00000560959 VPS25Q9BRG1 176 aa8.47□□□□□ -1.05
TPM1-226ENST00000560959 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.06
TPM1-226ENST00000560959 C14orf144Q96I85 54 aa8.45□□□□□ -1.06
TPM1-226ENST00000560959 MT1BP07438 61 aa8.44□□□□□ -1.06
TPM1-226ENST00000560959 RBM3P98179 157 aaKnown RBP8.44□□□□□ -1.06
TPM1-226ENST00000560959 C2orf91Q6ZV80 131 aa8.43□□□□□ -1.06
TPM1-226ENST00000560959 Q6ZQT0 140 aa8.42□□□□□ -1.06
TPM1-226ENST00000560959 Q5VV11 94 aa8.41□□□□□ -1.06
TPM1-226ENST00000560959 COX6CP09669 75 aa8.4□□□□□ -1.06
TPM1-226ENST00000560959 Q6ZVQ6 151 aa8.4□□□□□ -1.06
TPM1-226ENST00000560959 KRTAP10-5P60370 271 aa8.39□□□□□ -1.07
TPM1-226ENST00000560959 KRTAP2-3P0C7H8 128 aa8.38□□□□□ -1.07
TPM1-226ENST00000560959 PSMB2P49721 201 aa8.38□□□□□ -1.07
TPM1-226ENST00000560959 FXYD2P54710 66 aa8.38□□□□□ -1.07
TPM1-226ENST00000560959 KRTAP19-8Q3LI54 63 aa8.38□□□□□ -1.07
TPM1-226ENST00000560959 KRTAP2-4Q9BYR9 128 aa8.38□□□□□ -1.07
TPM1-226ENST00000560959 C9JAW5 83 aa8.35□□□□□ -1.07
TPM1-226ENST00000560959 S100A6P06703 90 aa8.34□□□□□ -1.07
TPM1-226ENST00000560959 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
TPM1-226ENST00000560959 A0A1B0GW54 56 aa8.33□□□□□ -1.08
TPM1-226ENST00000560959 SPATA45Q537H7 98 aa8.33□□□□□ -1.08
TPM1-226ENST00000560959 PAM16Q9Y3D7 125 aa8.32□□□□□ -1.08
TPM1-226ENST00000560959 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
TPM1-226ENST00000560959 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
TPM1-226ENST00000560959 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
TPM1-226ENST00000560959 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
TPM1-226ENST00000560959 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
TPM1-226ENST00000560959 C7orf65Q6ZTY9 151 aa8.25□□□□□ -1.09
TPM1-226ENST00000560959 VAMP8Q9BV40 100 aa8.25□□□□□ -1.09
TPM1-226ENST00000560959 K7ERJ3 54 aa8.24□□□□□ -1.09
TPM1-226ENST00000560959 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
TPM1-226ENST00000560959 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
TPM1-226ENST00000560959 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
TPM1-226ENST00000560959 BAALC-AS2P0C853 105 aa8.22□□□□□ -1.09
TPM1-226ENST00000560959 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
TPM1-226ENST00000560959 HSD52Q0P140 79 aa8.2□□□□□ -1.1
TPM1-226ENST00000560959 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
TPM1-226ENST00000560959 S100A1P23297 94 aa8.19□□□□□ -1.1
TPM1-226ENST00000560959 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
TPM1-226ENST00000560959 NDUFS5O43920 106 aa8.18□□□□□ -1.1
TPM1-226ENST00000560959 SCGB1C2P0DMR2 95 aa8.18□□□□□ -1.1
TPM1-226ENST00000560959 PDE6GP18545 87 aa8.18□□□□□ -1.1
TPM1-226ENST00000560959 JMJD7-PLA2G4BH0Y9G9 81 aa8.17□□□□□ -1.1
TPM1-226ENST00000560959 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
TPM1-226ENST00000560959 Q5W150 140 aa8.15□□□□□ -1.1
TPM1-226ENST00000560959 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
TPM1-226ENST00000560959 NREPQ16612 68 aa8.14□□□□□ -1.11
TPM1-226ENST00000560959 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
TPM1-226ENST00000560959 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
TPM1-226ENST00000560959 S4R3F8 94 aa8.09□□□□□ -1.11
TPM1-226ENST00000560959 SPRR2EP22531 72 aa8.08□□□□□ -1.12
TPM1-226ENST00000560959 SPRR2BP35325 72 aa8.08□□□□□ -1.12
TPM1-226ENST00000560959 SPRR2AP35326 72 aa8.08□□□□□ -1.12
TPM1-226ENST00000560959 KRTAP2-2Q9BYT5 123 aa8.08□□□□□ -1.12
TPM1-226ENST00000560959 KRTAP2-1Q9BYU5 128 aa8.08□□□□□ -1.12
TPM1-226ENST00000560959 K7EQZ3 153 aa8.07□□□□□ -1.12
TPM1-226ENST00000560959 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
TPM1-226ENST00000560959 SPRR2FQ96RM1 72 aa8.07□□□□□ -1.12
TPM1-226ENST00000560959 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
TPM1-226ENST00000560959 LCA10Q71F78 164 aa8.03□□□□□ -1.12
TPM1-226ENST00000560959 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
TPM1-226ENST00000560959 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
TPM1-226ENST00000560959 ATXN8Q156A1 80 aa8.01□□□□□ -1.13
TPM1-226ENST00000560959 CXCL6P80162 114 aa7.97□□□□□ -1.13
TPM1-226ENST00000560959 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
TPM1-226ENST00000560959 C1orf64Q8NEQ6 169 aa7.96□□□□□ -1.14
TPM1-226ENST00000560959 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
TPM1-226ENST00000560959 BPY2O14599 106 aa7.93□□□□□ -1.14
TPM1-226ENST00000560959 LCE1AQ5T7P2 110 aa7.93□□□□□ -1.14
TPM1-226ENST00000560959 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
TPM1-226ENST00000560959 PRO2289Q9P1D8 64 aa7.88□□□□□ -1.15
TPM1-226ENST00000560959 PYY3Q5JQD4 70 aa7.87□□□□□ -1.15
TPM1-226ENST00000560959 KRTAP8-1Q8IUC2 63 aa7.87□□□□□ -1.15
TPM1-226ENST00000560959 SPRR2DP22532 72 aa7.83□□□□□ -1.16
TPM1-226ENST00000560959 Q8N9L7 120 aa7.81□□□□□ -1.16
TPM1-226ENST00000560959 MT1XP80297 61 aa7.78□□□□□ -1.16
TPM1-226ENST00000560959 NAA38Q9BRA0 125 aaKnown RBP7.77□□□□□ -1.17
TPM1-226ENST00000560959 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
TPM1-226ENST00000560959 H0YAA0 97 aa7.72□□□□□ -1.17
TPM1-226ENST00000560959 M0R143 59 aa7.69□□□□□ -1.18
TPM1-226ENST00000560959 H3BT86 120 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms