RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
TPM1-224ENST00000560615 RBM3P98179 157 aaKnown RBP9.19□□□□□ -0.94
TPM1-224ENST00000560615 J3KT08 172 aa9.18□□□□□ -0.94
TPM1-224ENST00000560615 K7ERJ3 54 aa9.16□□□□□ -0.94
TPM1-224ENST00000560615 SCGB1C2P0DMR2 95 aa9.15□□□□□ -0.94
TPM1-224ENST00000560615 USH2AO75445 5202 aa9.15□□□□□ -0.95
TPM1-224ENST00000560615 NDUFB1O75438 58 aa9.14□□□□□ -0.95
TPM1-224ENST00000560615 MT1FP04733 61 aa9.14□□□□□ -0.95
TPM1-224ENST00000560615 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
TPM1-224ENST00000560615 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
TPM1-224ENST00000560615 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
TPM1-224ENST00000560615 C9JAW5 83 aa9.11□□□□□ -0.95
TPM1-224ENST00000560615 SPINK7P58062 85 aa9.1□□□□□ -0.95
TPM1-224ENST00000560615 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
TPM1-224ENST00000560615 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.95
TPM1-224ENST00000560615 LCE2BO14633 110 aa9.08□□□□□ -0.96
TPM1-224ENST00000560615 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
TPM1-224ENST00000560615 UQCR10Q9UDW1 63 aa9.08□□□□□ -0.96
TPM1-224ENST00000560615 BAALC-AS2P0C853 105 aa9.06□□□□□ -0.96
TPM1-224ENST00000560615 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
TPM1-224ENST00000560615 Q6ZQT0 140 aa9.05□□□□□ -0.96
TPM1-224ENST00000560615 Q8N9P0 234 aaPredicted RBP9.04□□□□□ -0.96
TPM1-224ENST00000560615 A0A1B0GW54 56 aa9.03□□□□□ -0.96
TPM1-224ENST00000560615 A8MWP4 228 aa9.02□□□□□ -0.97
TPM1-224ENST00000560615 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
TPM1-224ENST00000560615 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
TPM1-224ENST00000560615 FCGBPQ9Y6R7 5405 aaPredicted RBP8.99□□□□□ -0.97
TPM1-224ENST00000560615 PDE6GP18545 87 aa8.98□□□□□ -0.97
TPM1-224ENST00000560615 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
TPM1-224ENST00000560615 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
TPM1-224ENST00000560615 LOC110117498A0A087WWA1 95 aa8.93□□□□□ -0.98
TPM1-224ENST00000560615 Q6ZVQ6 151 aa8.93□□□□□ -0.98
TPM1-224ENST00000560615 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
TPM1-224ENST00000560615 NREPQ16612 68 aa8.88□□□□□ -0.99
TPM1-224ENST00000560615 M0R143 59 aa8.87□□□□□ -0.99
TPM1-224ENST00000560615 KRTAP19-6Q3LI70 58 aa8.87□□□□□ -0.99
TPM1-224ENST00000560615 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
TPM1-224ENST00000560615 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
TPM1-224ENST00000560615 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
TPM1-224ENST00000560615 C14orf132Q9NPU4 83 aa8.84□□□□□ -0.99
TPM1-224ENST00000560615 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
TPM1-224ENST00000560615 NDUFS5O43920 106 aa8.81□□□□□ -1
TPM1-224ENST00000560615 MACF1Q9UPN3 7388 aaKnown RBP8.8□□□□□ -1
TPM1-224ENST00000560615 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
TPM1-224ENST00000560615 hDV103S1A0JD37 113 aa8.78□□□□□ -1
TPM1-224ENST00000560615 NAA38Q9BRA0 125 aaKnown RBP8.78□□□□□ -1
TPM1-224ENST00000560615 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
TPM1-224ENST00000560615 SYNE2Q8WXH0 6885 aaKnown RBP8.72□□□□□ -1.01
TPM1-224ENST00000560615 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
TPM1-224ENST00000560615 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
TPM1-224ENST00000560615 K7EQZ3 153 aa8.71□□□□□ -1.02
TPM1-224ENST00000560615 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
TPM1-224ENST00000560615 BPY2O14599 106 aa8.69□□□□□ -1.02
TPM1-224ENST00000560615 H3BT86 120 aa8.64□□□□□ -1.03
TPM1-224ENST00000560615 KRTAP6-3Q3LI67 103 aa8.62□□□□□ -1.03
TPM1-224ENST00000560615 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
TPM1-224ENST00000560615 TSTD3H0UI37 97 aa8.6□□□□□ -1.03
TPM1-224ENST00000560615 Q5W150 140 aa8.59□□□□□ -1.03
TPM1-224ENST00000560615 HCG22E2RYF7 251 aa8.58□□□□□ -1.04
TPM1-224ENST00000560615 BATFQ16520 125 aa8.58□□□□□ -1.04
TPM1-224ENST00000560615 CXCL6P80162 114 aa8.57□□□□□ -1.04
TPM1-224ENST00000560615 C4orf26Q17RF5 130 aa8.56□□□□□ -1.04
TPM1-224ENST00000560615 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
TPM1-224ENST00000560615 FAM236AA0A1B0GUQ0 79 aa8.54□□□□□ -1.04
TPM1-224ENST00000560615 FAM236BA0A1B0GV22 79 aa8.54□□□□□ -1.04
TPM1-224ENST00000560615 C9orf118A6NHY6 69 aa8.53□□□□□ -1.04
TPM1-224ENST00000560615 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
TPM1-224ENST00000560615 C5orf47Q569G3 176 aa8.5□□□□□ -1.05
TPM1-224ENST00000560615 Q8N9L7 120 aa8.5□□□□□ -1.05
TPM1-224ENST00000560615 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
TPM1-224ENST00000560615 S4R3F8 94 aa8.46□□□□□ -1.06
TPM1-224ENST00000560615 A6NN06 94 aa8.45□□□□□ -1.06
TPM1-224ENST00000560615 UBL5Q9BZL1 73 aa8.45□□□□□ -1.06
TPM1-224ENST00000560615 Q5VV11 94 aa8.43□□□□□ -1.06
TPM1-224ENST00000560615 TAX1BP3O14907 124 aa8.42□□□□□ -1.06
TPM1-224ENST00000560615 C1orf64Q8NEQ6 169 aa8.41□□□□□ -1.06
TPM1-224ENST00000560615 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
TPM1-224ENST00000560615 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
TPM1-224ENST00000560615 LCA10Q71F78 164 aa8.34□□□□□ -1.07
TPM1-224ENST00000560615 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
TPM1-224ENST00000560615 KRTAP3-1Q9BYR8 98 aa8.34□□□□□ -1.07
TPM1-224ENST00000560615 MT1BP07438 61 aa8.32□□□□□ -1.08
TPM1-224ENST00000560615 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
TPM1-224ENST00000560615 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
TPM1-224ENST00000560615 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
TPM1-224ENST00000560615 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
TPM1-224ENST00000560615 NEBP20929 6669 aa8.23□□□□□ -1.09
TPM1-224ENST00000560615 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
TPM1-224ENST00000560615 IMUPQ9GZP8 106 aa8.21□□□□□ -1.1
TPM1-224ENST00000560615 COL5A1-AS1Q5SY13 56 aa8.18□□□□□ -1.1
TPM1-224ENST00000560615 PRO0461Q9UI25 63 aa8.18□□□□□ -1.1
TPM1-224ENST00000560615 K7EP34 96 aa8.16□□□□□ -1.1
TPM1-224ENST00000560615 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
TPM1-224ENST00000560615 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
TPM1-224ENST00000560615 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
TPM1-224ENST00000560615 KRTAP20-1Q3LI63 56 aa8.11□□□□□ -1.11
TPM1-224ENST00000560615 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
TPM1-224ENST00000560615 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
TPM1-224ENST00000560615 GTF2H5Q6ZYL4 71 aa8.1□□□□□ -1.11
TPM1-224ENST00000560615 KRTAP5-9P26371 169 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms