RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 J3KT08 172 aa6.8□□□□□ -1.32
SMAD3-213ENST00000560175 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-213ENST00000560175 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
SMAD3-213ENST00000560175 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
SMAD3-213ENST00000560175 C8orf87E5RJ46 101 aa6.79□□□□□ -1.32
SMAD3-213ENST00000560175 TAX1BP3O14907 124 aa6.79□□□□□ -1.32
SMAD3-213ENST00000560175 IGHV6-1A0A0B4J1U7 121 aa6.78□□□□□ -1.32
SMAD3-213ENST00000560175 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
SMAD3-213ENST00000560175 BATFQ16520 125 aa6.77□□□□□ -1.33
SMAD3-213ENST00000560175 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
SMAD3-213ENST00000560175 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
SMAD3-213ENST00000560175 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
SMAD3-213ENST00000560175 H3BT86 120 aa6.74□□□□□ -1.33
SMAD3-213ENST00000560175 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
SMAD3-213ENST00000560175 A8MWP4 228 aa6.71□□□□□ -1.34
SMAD3-213ENST00000560175 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
SMAD3-213ENST00000560175 M0R2T5 61 aa6.7□□□□□ -1.34
SMAD3-213ENST00000560175 NDUFB1O75438 58 aa6.7□□□□□ -1.34
SMAD3-213ENST00000560175 IGKV3D-7A0A0C4DH55 119 aa6.69□□□□□ -1.34
SMAD3-213ENST00000560175 HRES1P13985 223 aa6.68□□□□□ -1.34
SMAD3-213ENST00000560175 NREPQ16612 68 aa6.67□□□□□ -1.34
SMAD3-213ENST00000560175 C8orf17Q9NRJ1 99 aa6.67□□□□□ -1.34
SMAD3-213ENST00000560175 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
SMAD3-213ENST00000560175 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
SMAD3-213ENST00000560175 ZCCHC13Q8WW36 166 aaKnown RBP6.66□□□□□ -1.34
SMAD3-213ENST00000560175 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
SMAD3-213ENST00000560175 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
SMAD3-213ENST00000560175 SPCS1Q9Y6A9 102 aa6.63□□□□□ -1.35
SMAD3-213ENST00000560175 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
SMAD3-213ENST00000560175 Q6ZVQ6 151 aa6.61□□□□□ -1.35
SMAD3-213ENST00000560175 MMP24-AS1A0A0U1RRL7 71 aa6.6□□□□□ -1.35
SMAD3-213ENST00000560175 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
SMAD3-213ENST00000560175 RBM12B-AS1Q9P1G2 102 aa6.6□□□□□ -1.35
SMAD3-213ENST00000560175 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
SMAD3-213ENST00000560175 SPINK7P58062 85 aa6.59□□□□□ -1.35
SMAD3-213ENST00000560175 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
SMAD3-213ENST00000560175 K7EQZ3 153 aa6.57□□□□□ -1.36
SMAD3-213ENST00000560175 MRPL34Q9BQ48 92 aaKnown RBP6.57□□□□□ -1.36
SMAD3-213ENST00000560175 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
SMAD3-213ENST00000560175 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
SMAD3-213ENST00000560175 K7EP34 96 aa6.55□□□□□ -1.36
SMAD3-213ENST00000560175 FAM236DA0A1B0GTK5 79 aa6.54□□□□□ -1.36
SMAD3-213ENST00000560175 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
SMAD3-213ENST00000560175 BPY2O14599 106 aa6.54□□□□□ -1.36
SMAD3-213ENST00000560175 FAM236CP0DP71 79 aa6.54□□□□□ -1.36
SMAD3-213ENST00000560175 LINC00846Q9NV44 126 aa6.49□□□□□ -1.37
SMAD3-213ENST00000560175 MT2AP02795 61 aa6.47□□□□□ -1.37
SMAD3-213ENST00000560175 F8W1H4 67 aa6.46□□□□□ -1.38
SMAD3-213ENST00000560175 GTF2H5Q6ZYL4 71 aa6.46□□□□□ -1.38
SMAD3-213ENST00000560175 Q8N9L7 120 aa6.46□□□□□ -1.38
SMAD3-213ENST00000560175 Q5W150 140 aa6.45□□□□□ -1.38
SMAD3-213ENST00000560175 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
SMAD3-213ENST00000560175 UBL5Q9BZL1 73 aa6.45□□□□□ -1.38
SMAD3-213ENST00000560175 CASC2Q6XLA1 102 aa6.44□□□□□ -1.38
SMAD3-213ENST00000560175 PCP4L1A6NKN8 68 aa6.42□□□□□ -1.38
SMAD3-213ENST00000560175 NDUFS5O43920 106 aa6.42□□□□□ -1.38
SMAD3-213ENST00000560175 MT1FP04733 61 aa6.41□□□□□ -1.38
SMAD3-213ENST00000560175 ETDBQ3ZM63 59 aa6.4□□□□□ -1.38
SMAD3-213ENST00000560175 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
SMAD3-213ENST00000560175 KRTAP9-3Q9BYQ3 159 aa6.39□□□□□ -1.39
SMAD3-213ENST00000560175 CXCL6P80162 114 aa6.38□□□□□ -1.39
SMAD3-213ENST00000560175 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
SMAD3-213ENST00000560175 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
SMAD3-213ENST00000560175 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
SMAD3-213ENST00000560175 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
SMAD3-213ENST00000560175 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
SMAD3-213ENST00000560175 USH2AO75445 5202 aa6.33□□□□□ -1.4
SMAD3-213ENST00000560175 LCE2BO14633 110 aa6.33□□□□□ -1.4
SMAD3-213ENST00000560175 ACYP1P07311 99 aa6.29□□□□□ -1.4
SMAD3-213ENST00000560175 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
SMAD3-213ENST00000560175 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
SMAD3-213ENST00000560175 FAM240AA0A1B0GVK7 77 aa6.26□□□□□ -1.41
SMAD3-213ENST00000560175 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
SMAD3-213ENST00000560175 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SMAD3-213ENST00000560175 ATP5EP2Q5VTU8 51 aa6.19□□□□□ -1.42
SMAD3-213ENST00000560175 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
SMAD3-213ENST00000560175 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
SMAD3-213ENST00000560175 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
SMAD3-213ENST00000560175 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
SMAD3-213ENST00000560175 LINC00643Q86TS7 51 aa6.13□□□□□ -1.43
SMAD3-213ENST00000560175 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
SMAD3-213ENST00000560175 A0A1B0GV90 55 aa6.12□□□□□ -1.43
SMAD3-213ENST00000560175 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
SMAD3-213ENST00000560175 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
SMAD3-213ENST00000560175 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
SMAD3-213ENST00000560175 S4R3F8 94 aa6.1□□□□□ -1.43
SMAD3-213ENST00000560175 UQCRQO14949 82 aa6.09□□□□□ -1.43
SMAD3-213ENST00000560175 HIST1H4AP62805 103 aaKnown RBP6.09□□□□□ -1.43
SMAD3-213ENST00000560175 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
SMAD3-213ENST00000560175 LCA10Q71F78 164 aa6.09□□□□□ -1.43
SMAD3-213ENST00000560175 CSAG1Q6PB30 78 aa6.08□□□□□ -1.44
SMAD3-213ENST00000560175 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
SMAD3-213ENST00000560175 A0A087WVE0 104 aa6.05□□□□□ -1.44
SMAD3-213ENST00000560175 ATOX1O00244 68 aa6.05□□□□□ -1.44
SMAD3-213ENST00000560175 H0Y9P7 68 aa6.02□□□□□ -1.45
SMAD3-213ENST00000560175 OCR1Q9BZK8 76 aa6.01□□□□□ -1.45
SMAD3-213ENST00000560175 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
SMAD3-213ENST00000560175 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
SMAD3-213ENST00000560175 J3QR89 54 aa5.96□□□□□ -1.46
SMAD3-213ENST00000560175 KRTAP19-8Q3LI54 63 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms