RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 VPS25Q9BRG1 176 aa8.6□□□□□ -1.03
LRRC28-210ENST00000558879 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
LRRC28-210ENST00000558879 C8orf87E5RJ46 101 aa8.59□□□□□ -1.03
LRRC28-210ENST00000558879 MPLKIPQ8TAP9 179 aa8.59□□□□□ -1.03
LRRC28-210ENST00000558879 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
LRRC28-210ENST00000558879 HRES1P13985 223 aa8.57□□□□□ -1.04
LRRC28-210ENST00000558879 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
LRRC28-210ENST00000558879 ATXN8Q156A1 80 aa8.56□□□□□ -1.04
LRRC28-210ENST00000558879 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
LRRC28-210ENST00000558879 C9JAW5 83 aa8.55□□□□□ -1.04
LRRC28-210ENST00000558879 J3KT08 172 aa8.53□□□□□ -1.04
LRRC28-210ENST00000558879 Q6ZQT0 140 aa8.53□□□□□ -1.04
LRRC28-210ENST00000558879 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.05
LRRC28-210ENST00000558879 JMJD7-PLA2G4BH0Y9G9 81 aa8.5□□□□□ -1.05
LRRC28-210ENST00000558879 LOC110117498A0A087WWA1 95 aa8.49□□□□□ -1.05
LRRC28-210ENST00000558879 FAM236DA0A1B0GTK5 79 aa8.49□□□□□ -1.05
LRRC28-210ENST00000558879 FAM236CP0DP71 79 aa8.49□□□□□ -1.05
LRRC28-210ENST00000558879 RBM12B-AS1Q9P1G2 102 aa8.49□□□□□ -1.05
LRRC28-210ENST00000558879 A0A1B0GW54 56 aa8.48□□□□□ -1.05
LRRC28-210ENST00000558879 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
LRRC28-210ENST00000558879 C9orf118A6NHY6 69 aa8.46□□□□□ -1.06
LRRC28-210ENST00000558879 Q8N9P0 234 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-210ENST00000558879 PDE6GP18545 87 aa8.44□□□□□ -1.06
LRRC28-210ENST00000558879 A8MWP4 228 aa8.43□□□□□ -1.06
LRRC28-210ENST00000558879 MT2AP02795 61 aa8.43□□□□□ -1.06
LRRC28-210ENST00000558879 NDUFB1O75438 58 aa8.42□□□□□ -1.06
LRRC28-210ENST00000558879 COL5A1-AS1Q5SY13 56 aa8.42□□□□□ -1.06
LRRC28-210ENST00000558879 C14orf132Q9NPU4 83 aa8.42□□□□□ -1.06
LRRC28-210ENST00000558879 A0A1W2PPM0 123 aa8.41□□□□□ -1.06
LRRC28-210ENST00000558879 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
LRRC28-210ENST00000558879 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
LRRC28-210ENST00000558879 TAX1BP3O14907 124 aa8.4□□□□□ -1.06
LRRC28-210ENST00000558879 SPINK7P58062 85 aa8.38□□□□□ -1.07
LRRC28-210ENST00000558879 MT1FP04733 61 aa8.37□□□□□ -1.07
LRRC28-210ENST00000558879 MTURNQ8N3F0 131 aa8.35□□□□□ -1.07
LRRC28-210ENST00000558879 USH2AO75445 5202 aa8.35□□□□□ -1.07
LRRC28-210ENST00000558879 H3BT86 120 aa8.34□□□□□ -1.07
LRRC28-210ENST00000558879 Q6ZVQ6 151 aa8.34□□□□□ -1.07
LRRC28-210ENST00000558879 PRR15Q8IV56 129 aa8.34□□□□□ -1.07
LRRC28-210ENST00000558879 PCP4L1A6NKN8 68 aa8.33□□□□□ -1.08
LRRC28-210ENST00000558879 SPCS1Q9Y6A9 102 aa8.33□□□□□ -1.08
LRRC28-210ENST00000558879 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
LRRC28-210ENST00000558879 NREPQ16612 68 aa8.31□□□□□ -1.08
LRRC28-210ENST00000558879 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
LRRC28-210ENST00000558879 SSPOA2VEC9 5147 aa8.29□□□□□ -1.08
LRRC28-210ENST00000558879 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
LRRC28-210ENST00000558879 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
LRRC28-210ENST00000558879 LCE2BO14633 110 aa8.28□□□□□ -1.08
LRRC28-210ENST00000558879 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
LRRC28-210ENST00000558879 K7EQZ3 153 aa8.26□□□□□ -1.09
LRRC28-210ENST00000558879 GTF2H5Q6ZYL4 71 aa8.26□□□□□ -1.09
LRRC28-210ENST00000558879 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
LRRC28-210ENST00000558879 hDV103S1A0JD37 113 aa8.22□□□□□ -1.09
LRRC28-210ENST00000558879 K7EP34 96 aa8.22□□□□□ -1.09
LRRC28-210ENST00000558879 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-210ENST00000558879 BPY2O14599 106 aa8.16□□□□□ -1.1
LRRC28-210ENST00000558879 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
LRRC28-210ENST00000558879 NDUFS5O43920 106 aa8.14□□□□□ -1.11
LRRC28-210ENST00000558879 F8W1H4 67 aa8.13□□□□□ -1.11
LRRC28-210ENST00000558879 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-210ENST00000558879 Q5W150 140 aa8.11□□□□□ -1.11
LRRC28-210ENST00000558879 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
LRRC28-210ENST00000558879 Q8N9L7 120 aa8.1□□□□□ -1.11
LRRC28-210ENST00000558879 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
LRRC28-210ENST00000558879 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
LRRC28-210ENST00000558879 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
LRRC28-210ENST00000558879 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
LRRC28-210ENST00000558879 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
LRRC28-210ENST00000558879 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
LRRC28-210ENST00000558879 UBL5Q9BZL1 73 aa8.05□□□□□ -1.12
LRRC28-210ENST00000558879 HCG22E2RYF7 251 aa8.04□□□□□ -1.12
LRRC28-210ENST00000558879 LINC00846Q9NV44 126 aa8.03□□□□□ -1.12
LRRC28-210ENST00000558879 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
LRRC28-210ENST00000558879 CXCL6P80162 114 aa8□□□□□ -1.13
LRRC28-210ENST00000558879 ETDBQ3ZM63 59 aa8□□□□□ -1.13
LRRC28-210ENST00000558879 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
LRRC28-210ENST00000558879 ACYP1P07311 99 aa7.92□□□□□ -1.14
LRRC28-210ENST00000558879 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
LRRC28-210ENST00000558879 A0A1B0GV90 55 aa7.84□□□□□ -1.15
LRRC28-210ENST00000558879 FAM240AA0A1B0GVK7 77 aa7.84□□□□□ -1.15
LRRC28-210ENST00000558879 MACF1Q9UPN3 7388 aaKnown RBP7.84□□□□□ -1.15
LRRC28-210ENST00000558879 TP53AIP1Q9HCN2 124 aa7.83□□□□□ -1.16
LRRC28-210ENST00000558879 C5orf47Q569G3 176 aa7.81□□□□□ -1.16
LRRC28-210ENST00000558879 S4R3F8 94 aa7.8□□□□□ -1.16
LRRC28-210ENST00000558879 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
LRRC28-210ENST00000558879 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
LRRC28-210ENST00000558879 J3QR89 54 aa7.78□□□□□ -1.16
LRRC28-210ENST00000558879 LCA10Q71F78 164 aa7.76□□□□□ -1.17
LRRC28-210ENST00000558879 H3BS24 57 aa7.74□□□□□ -1.17
LRRC28-210ENST00000558879 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
LRRC28-210ENST00000558879 SYNE2Q8WXH0 6885 aaKnown RBP7.72□□□□□ -1.17
LRRC28-210ENST00000558879 FAM236AA0A1B0GUQ0 79 aa7.71□□□□□ -1.18
LRRC28-210ENST00000558879 FAM236BA0A1B0GV22 79 aa7.71□□□□□ -1.18
LRRC28-210ENST00000558879 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
LRRC28-210ENST00000558879 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
LRRC28-210ENST00000558879 MT1BP07438 61 aa7.68□□□□□ -1.18
LRRC28-210ENST00000558879 HIST1H4AP62805 103 aaKnown RBP7.68□□□□□ -1.18
LRRC28-210ENST00000558879 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
LRRC28-210ENST00000558879 TRAV22A0A0B4J277 110 aa7.67□□□□□ -1.18
LRRC28-210ENST00000558879 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms