RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 Q5VSD8 79 aa8.01□□□□□ -1.13
TPM1-215ENST00000558868 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
TPM1-215ENST00000558868 HCG22E2RYF7 251 aa8□□□□□ -1.13
TPM1-215ENST00000558868 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
TPM1-215ENST00000558868 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
TPM1-215ENST00000558868 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
TPM1-215ENST00000558868 TRAV7A0A075B6U4 112 aa7.97□□□□□ -1.13
TPM1-215ENST00000558868 COX7CP15954 63 aa7.96□□□□□ -1.14
TPM1-215ENST00000558868 A0A1B0GVX0 72 aa7.95□□□□□ -1.14
TPM1-215ENST00000558868 UQCRQO14949 82 aa7.95□□□□□ -1.14
TPM1-215ENST00000558868 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
TPM1-215ENST00000558868 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
TPM1-215ENST00000558868 Q8N1X5 172 aa7.93□□□□□ -1.14
TPM1-215ENST00000558868 C1orf195Q5TG92 126 aa7.92□□□□□ -1.14
TPM1-215ENST00000558868 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
TPM1-215ENST00000558868 FAT1Q14517 4588 aa7.91□□□□□ -1.14
TPM1-215ENST00000558868 MYCBP2O75592 4640 aa7.91□□□□□ -1.14
TPM1-215ENST00000558868 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
TPM1-215ENST00000558868 WFDC13Q8IUB5 93 aa7.91□□□□□ -1.14
TPM1-215ENST00000558868 C8orf17Q9NRJ1 99 aa7.91□□□□□ -1.14
TPM1-215ENST00000558868 MMP24-AS1A0A0U1RRL7 71 aa7.9□□□□□ -1.14
TPM1-215ENST00000558868 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
TPM1-215ENST00000558868 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
TPM1-215ENST00000558868 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
TPM1-215ENST00000558868 CCDC179H3BU77 68 aa7.89□□□□□ -1.15
TPM1-215ENST00000558868 OCR1Q9BZK8 76 aa7.89□□□□□ -1.15
TPM1-215ENST00000558868 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
TPM1-215ENST00000558868 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
TPM1-215ENST00000558868 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
TPM1-215ENST00000558868 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
TPM1-215ENST00000558868 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
TPM1-215ENST00000558868 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
TPM1-215ENST00000558868 LINC00313P59037 77 aa7.82□□□□□ -1.16
TPM1-215ENST00000558868 MRPL34Q9BQ48 92 aaKnown RBP7.82□□□□□ -1.16
TPM1-215ENST00000558868 TP53AIP1Q9HCN2 124 aa7.82□□□□□ -1.16
TPM1-215ENST00000558868 C5orf47Q569G3 176 aa7.81□□□□□ -1.16
TPM1-215ENST00000558868 C20orf197Q8N268 126 aa7.8□□□□□ -1.16
TPM1-215ENST00000558868 NOTCH2NLQ7Z3S9 236 aa7.77□□□□□ -1.17
TPM1-215ENST00000558868 NDUFS5O43920 106 aa7.76□□□□□ -1.17
TPM1-215ENST00000558868 MP68P56378 58 aa7.76□□□□□ -1.17
TPM1-215ENST00000558868 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
TPM1-215ENST00000558868 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
TPM1-215ENST00000558868 OXTP01178 125 aa7.75□□□□□ -1.17
TPM1-215ENST00000558868 H3BPC8 53 aa7.74□□□□□ -1.17
TPM1-215ENST00000558868 NDUFC1O43677 76 aa7.74□□□□□ -1.17
TPM1-215ENST00000558868 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
TPM1-215ENST00000558868 TRAV22A0A0B4J277 110 aa7.71□□□□□ -1.18
TPM1-215ENST00000558868 H0Y9P7 68 aa7.71□□□□□ -1.18
TPM1-215ENST00000558868 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
TPM1-215ENST00000558868 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
TPM1-215ENST00000558868 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
TPM1-215ENST00000558868 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
TPM1-215ENST00000558868 FLG2Q5D862 2391 aaPredicted RBP7.67□□□□□ -1.18
TPM1-215ENST00000558868 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
TPM1-215ENST00000558868 TMEM258P61165 79 aa7.67□□□□□ -1.18
TPM1-215ENST00000558868 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
TPM1-215ENST00000558868 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
TPM1-215ENST00000558868 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
TPM1-215ENST00000558868 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
TPM1-215ENST00000558868 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
TPM1-215ENST00000558868 H7BZZ5 65 aa7.64□□□□□ -1.19
TPM1-215ENST00000558868 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
TPM1-215ENST00000558868 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
TPM1-215ENST00000558868 TNXBP22105 4242 aa7.63□□□□□ -1.19
TPM1-215ENST00000558868 LRP1Q07954 4544 aaKnown RBP7.6□□□□□ -1.19
TPM1-215ENST00000558868 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.19
TPM1-215ENST00000558868 ATP5EP56381 51 aaPredicted RBP7.59□□□□□ -1.19
TPM1-215ENST00000558868 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
TPM1-215ENST00000558868 IGLV7-46A0A075B6I9 117 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 Q5W150 140 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
TPM1-215ENST00000558868 A8MUU9 505 aa7.56□□□□□ -1.2
TPM1-215ENST00000558868 Q75L30 129 aa7.51□□□□□ -1.21
TPM1-215ENST00000558868 MUC2Q02817 5179 aa7.5□□□□□ -1.21
TPM1-215ENST00000558868 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
TPM1-215ENST00000558868 IGKV2-30P06310 120 aa7.49□□□□□ -1.21
TPM1-215ENST00000558868 PRR4Q16378 134 aa7.49□□□□□ -1.21
TPM1-215ENST00000558868 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
TPM1-215ENST00000558868 FAT4Q6V0I7 4981 aa7.48□□□□□ -1.21
TPM1-215ENST00000558868 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
TPM1-215ENST00000558868 LRP2P98164 4655 aa7.45□□□□□ -1.22
TPM1-215ENST00000558868 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
TPM1-215ENST00000558868 SERP1Q9Y6X1 66 aa7.44□□□□□ -1.22
TPM1-215ENST00000558868 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
TPM1-215ENST00000558868 C7orf65Q6ZTY9 151 aa7.43□□□□□ -1.22
TPM1-215ENST00000558868 IGKV2D-30A0A075B6S6 120 aa7.42□□□□□ -1.22
TPM1-215ENST00000558868 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
TPM1-215ENST00000558868 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
TPM1-215ENST00000558868 XP32Q5T750 250 aa7.41□□□□□ -1.22
TPM1-215ENST00000558868 HRES1P13985 223 aa7.36□□□□□ -1.23
TPM1-215ENST00000558868 SPINK7P58062 85 aa7.31□□□□□ -1.24
TPM1-215ENST00000558868 ACYP2P14621 99 aa7.29□□□□□ -1.24
TPM1-215ENST00000558868 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
TPM1-215ENST00000558868 SMIM26A0A096LP01 95 aa7.25□□□□□ -1.25
TPM1-215ENST00000558868 A8MUN3 132 aa7.25□□□□□ -1.25
TPM1-215ENST00000558868 COA5Q86WW8 74 aa7.24□□□□□ -1.25
TPM1-215ENST00000558868 SEC61BP60468 96 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms