RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PCP4L1A6NKN8 68 aa7.29□□□□□ -1.24
TSPAN3-205ENST00000558745 Q75L30 129 aa7.29□□□□□ -1.24
TSPAN3-205ENST00000558745 LINC00313P59037 77 aa7.28□□□□□ -1.24
TSPAN3-205ENST00000558745 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
TSPAN3-205ENST00000558745 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.24
TSPAN3-205ENST00000558745 ATP11AUNQ6ZP68 121 aa7.27□□□□□ -1.24
TSPAN3-205ENST00000558745 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.24
TSPAN3-205ENST00000558745 A8MUU9 505 aa7.27□□□□□ -1.25
TSPAN3-205ENST00000558745 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
TSPAN3-205ENST00000558745 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
TSPAN3-205ENST00000558745 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
TSPAN3-205ENST00000558745 H3BT86 120 aa7.26□□□□□ -1.25
TSPAN3-205ENST00000558745 PDE6GP18545 87 aa7.24□□□□□ -1.25
TSPAN3-205ENST00000558745 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
TSPAN3-205ENST00000558745 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
TSPAN3-205ENST00000558745 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
TSPAN3-205ENST00000558745 A0A1B0GW54 56 aa7.18□□□□□ -1.26
TSPAN3-205ENST00000558745 J3KT08 172 aa7.18□□□□□ -1.26
TSPAN3-205ENST00000558745 K7EP34 96 aa7.18□□□□□ -1.26
TSPAN3-205ENST00000558745 NREPQ16612 68 aa7.18□□□□□ -1.26
TSPAN3-205ENST00000558745 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
TSPAN3-205ENST00000558745 IGKV3D-7A0A0C4DH55 119 aa7.16□□□□□ -1.26
TSPAN3-205ENST00000558745 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
TSPAN3-205ENST00000558745 MT1HP80294 61 aa7.16□□□□□ -1.26
TSPAN3-205ENST00000558745 A8MWP4 228 aa7.14□□□□□ -1.27
TSPAN3-205ENST00000558745 NDUFB1O75438 58 aa7.14□□□□□ -1.27
TSPAN3-205ENST00000558745 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
TSPAN3-205ENST00000558745 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
TSPAN3-205ENST00000558745 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
TSPAN3-205ENST00000558745 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-205ENST00000558745 PRR15Q8IV56 129 aa7.1□□□□□ -1.27
TSPAN3-205ENST00000558745 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-205ENST00000558745 K7EQZ3 153 aa7.07□□□□□ -1.28
TSPAN3-205ENST00000558745 Q6ZVQ6 151 aa7.07□□□□□ -1.28
TSPAN3-205ENST00000558745 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
TSPAN3-205ENST00000558745 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
TSPAN3-205ENST00000558745 BPY2O14599 106 aa7.05□□□□□ -1.28
TSPAN3-205ENST00000558745 Q8N9P0 234 aaPredicted RBP7.05□□□□□ -1.28
TSPAN3-205ENST00000558745 Q8N9L7 120 aa7.04□□□□□ -1.28
TSPAN3-205ENST00000558745 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
TSPAN3-205ENST00000558745 LINC00846Q9NV44 126 aa7.04□□□□□ -1.28
TSPAN3-205ENST00000558745 F8W1H4 67 aa7.02□□□□□ -1.28
TSPAN3-205ENST00000558745 M0R2T5 61 aa7.02□□□□□ -1.28
TSPAN3-205ENST00000558745 ETDBQ3ZM63 59 aa7.02□□□□□ -1.28
TSPAN3-205ENST00000558745 HRES1P13985 223 aa7.01□□□□□ -1.29
TSPAN3-205ENST00000558745 MRPL34Q9BQ48 92 aaKnown RBP7.01□□□□□ -1.29
TSPAN3-205ENST00000558745 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
TSPAN3-205ENST00000558745 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
TSPAN3-205ENST00000558745 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
TSPAN3-205ENST00000558745 SPINK7P58062 85 aa6.98□□□□□ -1.29
TSPAN3-205ENST00000558745 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
TSPAN3-205ENST00000558745 MPLKIPQ8TAP9 179 aa6.97□□□□□ -1.29
TSPAN3-205ENST00000558745 UBL5Q9BZL1 73 aa6.97□□□□□ -1.29
TSPAN3-205ENST00000558745 NDUFS5O43920 106 aa6.96□□□□□ -1.3
TSPAN3-205ENST00000558745 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
TSPAN3-205ENST00000558745 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
TSPAN3-205ENST00000558745 CASC2Q6XLA1 102 aa6.92□□□□□ -1.3
TSPAN3-205ENST00000558745 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
TSPAN3-205ENST00000558745 Q5W150 140 aa6.91□□□□□ -1.3
TSPAN3-205ENST00000558745 A0A1B0GV90 55 aa6.89□□□□□ -1.31
TSPAN3-205ENST00000558745 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
TSPAN3-205ENST00000558745 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
TSPAN3-205ENST00000558745 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
TSPAN3-205ENST00000558745 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
TSPAN3-205ENST00000558745 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
TSPAN3-205ENST00000558745 CXCL6P80162 114 aa6.81□□□□□ -1.32
TSPAN3-205ENST00000558745 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
TSPAN3-205ENST00000558745 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
TSPAN3-205ENST00000558745 ACYP1P07311 99 aa6.77□□□□□ -1.32
TSPAN3-205ENST00000558745 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
TSPAN3-205ENST00000558745 FAM240AA0A1B0GVK7 77 aa6.74□□□□□ -1.33
TSPAN3-205ENST00000558745 USH2AO75445 5202 aa6.73□□□□□ -1.33
TSPAN3-205ENST00000558745 MT2AP02795 61 aa6.73□□□□□ -1.33
TSPAN3-205ENST00000558745 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
TSPAN3-205ENST00000558745 C4orf26Q17RF5 130 aa6.71□□□□□ -1.34
TSPAN3-205ENST00000558745 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-205ENST00000558745 HIST1H4AP62805 103 aaKnown RBP6.7□□□□□ -1.34
TSPAN3-205ENST00000558745 MT1FP04733 61 aa6.69□□□□□ -1.34
TSPAN3-205ENST00000558745 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
TSPAN3-205ENST00000558745 TP53AIP1Q9HCN2 124 aa6.68□□□□□ -1.34
TSPAN3-205ENST00000558745 A0A087WVE0 104 aa6.66□□□□□ -1.34
TSPAN3-205ENST00000558745 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
TSPAN3-205ENST00000558745 LINC00643Q86TS7 51 aa6.65□□□□□ -1.35
TSPAN3-205ENST00000558745 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.35
TSPAN3-205ENST00000558745 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
TSPAN3-205ENST00000558745 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
TSPAN3-205ENST00000558745 C1orf64Q8NEQ6 169 aa6.58□□□□□ -1.36
TSPAN3-205ENST00000558745 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
TSPAN3-205ENST00000558745 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
TSPAN3-205ENST00000558745 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
TSPAN3-205ENST00000558745 J3QR89 54 aa6.54□□□□□ -1.36
TSPAN3-205ENST00000558745 UQCRQO14949 82 aa6.53□□□□□ -1.36
TSPAN3-205ENST00000558745 H0Y9P7 68 aa6.52□□□□□ -1.37
TSPAN3-205ENST00000558745 LOC101927531A0A1B0GV80 90 aa6.51□□□□□ -1.37
TSPAN3-205ENST00000558745 C5orf47Q569G3 176 aa6.51□□□□□ -1.37
TSPAN3-205ENST00000558745 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
TSPAN3-205ENST00000558745 S4R3F8 94 aa6.49□□□□□ -1.37
TSPAN3-205ENST00000558745 LCA10Q71F78 164 aa6.48□□□□□ -1.37
TSPAN3-205ENST00000558745 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
TSPAN3-205ENST00000558745 LINC00208Q96KT6 92 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms