RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DSCR8Q96T75 97 aa6.07□□□□□ -1.44
HERC1-202ENST00000558324 BAALC-AS2P0C853 105 aa6.05□□□□□ -1.44
HERC1-202ENST00000558324 NAA38Q9BRA0 125 aaKnown RBP6.05□□□□□ -1.44
HERC1-202ENST00000558324 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
HERC1-202ENST00000558324 TAX1BP3O14907 124 aa6.04□□□□□ -1.44
HERC1-202ENST00000558324 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
HERC1-202ENST00000558324 A0A1B0GVX0 72 aa6.03□□□□□ -1.44
HERC1-202ENST00000558324 C9JAW5 83 aa6.03□□□□□ -1.44
HERC1-202ENST00000558324 GTF2H5Q6ZYL4 71 aa6.03□□□□□ -1.44
HERC1-202ENST00000558324 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
HERC1-202ENST00000558324 C9orf118A6NHY6 69 aa6□□□□□ -1.45
HERC1-202ENST00000558324 ATXN8Q156A1 80 aa6□□□□□ -1.45
HERC1-202ENST00000558324 HRES1P13985 223 aa5.99□□□□□ -1.45
HERC1-202ENST00000558324 Q6ZQT0 140 aa5.99□□□□□ -1.45
HERC1-202ENST00000558324 J3KT08 172 aa5.98□□□□□ -1.45
HERC1-202ENST00000558324 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
HERC1-202ENST00000558324 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
HERC1-202ENST00000558324 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
HERC1-202ENST00000558324 K7EP34 96 aa5.96□□□□□ -1.46
HERC1-202ENST00000558324 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 K7ERU9 68 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 NDUFB1O75438 58 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 MPLKIPQ8TAP9 179 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
HERC1-202ENST00000558324 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
HERC1-202ENST00000558324 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
HERC1-202ENST00000558324 SPCS1Q9Y6A9 102 aa5.94□□□□□ -1.46
HERC1-202ENST00000558324 A8MWP4 228 aa5.92□□□□□ -1.46
HERC1-202ENST00000558324 LYRM7Q5U5X0 104 aa5.92□□□□□ -1.46
HERC1-202ENST00000558324 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
HERC1-202ENST00000558324 IGKV3D-7A0A0C4DH55 119 aa5.91□□□□□ -1.46
HERC1-202ENST00000558324 MT2AP02795 61 aa5.91□□□□□ -1.46
HERC1-202ENST00000558324 SPINK7P58062 85 aa5.91□□□□□ -1.46
HERC1-202ENST00000558324 PDE6GP18545 87 aa5.9□□□□□ -1.46
HERC1-202ENST00000558324 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
HERC1-202ENST00000558324 A0A1B0GW54 56 aa5.89□□□□□ -1.47
HERC1-202ENST00000558324 MTURNQ8N3F0 131 aa5.88□□□□□ -1.47
HERC1-202ENST00000558324 F8W1H4 67 aa5.87□□□□□ -1.47
HERC1-202ENST00000558324 J3QR89 54 aa5.87□□□□□ -1.47
HERC1-202ENST00000558324 MT1FP04733 61 aa5.87□□□□□ -1.47
HERC1-202ENST00000558324 NREPQ16612 68 aa5.87□□□□□ -1.47
HERC1-202ENST00000558324 Q6ZVQ6 151 aa5.86□□□□□ -1.47
HERC1-202ENST00000558324 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
HERC1-202ENST00000558324 PRR15Q8IV56 129 aa5.86□□□□□ -1.47
HERC1-202ENST00000558324 USH2AO75445 5202 aa5.85□□□□□ -1.47
HERC1-202ENST00000558324 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
HERC1-202ENST00000558324 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
HERC1-202ENST00000558324 PCP4P48539 62 aa5.83□□□□□ -1.48
HERC1-202ENST00000558324 H3BT86 120 aa5.81□□□□□ -1.48
HERC1-202ENST00000558324 K7EQZ3 153 aa5.81□□□□□ -1.48
HERC1-202ENST00000558324 NDUFS5O43920 106 aa5.81□□□□□ -1.48
HERC1-202ENST00000558324 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
HERC1-202ENST00000558324 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
HERC1-202ENST00000558324 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
HERC1-202ENST00000558324 LCE2BO14633 110 aa5.79□□□□□ -1.48
HERC1-202ENST00000558324 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
HERC1-202ENST00000558324 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
HERC1-202ENST00000558324 BPY2O14599 106 aa5.76□□□□□ -1.49
HERC1-202ENST00000558324 PRO0461Q9UI25 63 aa5.76□□□□□ -1.49
HERC1-202ENST00000558324 ETDBQ3ZM63 59 aa5.75□□□□□ -1.49
HERC1-202ENST00000558324 Q8N9L7 120 aa5.75□□□□□ -1.49
HERC1-202ENST00000558324 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
HERC1-202ENST00000558324 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
HERC1-202ENST00000558324 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
HERC1-202ENST00000558324 SCGB1A1P11684 91 aa5.73□□□□□ -1.49
HERC1-202ENST00000558324 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
HERC1-202ENST00000558324 Q5W150 140 aa5.7□□□□□ -1.5
HERC1-202ENST00000558324 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
HERC1-202ENST00000558324 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
HERC1-202ENST00000558324 HCG22E2RYF7 251 aa5.69□□□□□ -1.5
HERC1-202ENST00000558324 SMCPP49901 116 aaPredicted RBP5.69□□□□□ -1.5
HERC1-202ENST00000558324 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
HERC1-202ENST00000558324 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
HERC1-202ENST00000558324 FCGBPQ9Y6R7 5405 aaPredicted RBP5.67□□□□□ -1.5
HERC1-202ENST00000558324 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.51
HERC1-202ENST00000558324 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
HERC1-202ENST00000558324 C4orf26Q17RF5 130 aa5.63□□□□□ -1.51
HERC1-202ENST00000558324 UBL5Q9BZL1 73 aa5.63□□□□□ -1.51
HERC1-202ENST00000558324 CXCL6P80162 114 aa5.62□□□□□ -1.51
HERC1-202ENST00000558324 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
HERC1-202ENST00000558324 ACYP1P07311 99 aa5.58□□□□□ -1.52
HERC1-202ENST00000558324 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
HERC1-202ENST00000558324 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
HERC1-202ENST00000558324 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
HERC1-202ENST00000558324 C5orf47Q569G3 176 aa5.54□□□□□ -1.52
HERC1-202ENST00000558324 ANAPC13Q9BS18 74 aa5.51□□□□□ -1.53
HERC1-202ENST00000558324 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
HERC1-202ENST00000558324 FAM236AA0A1B0GUQ0 79 aa5.5□□□□□ -1.53
HERC1-202ENST00000558324 FAM236BA0A1B0GV22 79 aa5.5□□□□□ -1.53
HERC1-202ENST00000558324 C1orf64Q8NEQ6 169 aa5.5□□□□□ -1.53
HERC1-202ENST00000558324 S4R3F8 94 aa5.5□□□□□ -1.53
HERC1-202ENST00000558324 IMUPQ9GZP8 106 aa5.49□□□□□ -1.53
HERC1-202ENST00000558324 LINC00643Q86TS7 51 aa5.48□□□□□ -1.53
HERC1-202ENST00000558324 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
HERC1-202ENST00000558324 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
HERC1-202ENST00000558324 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
HERC1-202ENST00000558324 LCA10Q71F78 164 aa5.46□□□□□ -1.54
HERC1-202ENST00000558324 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
HERC1-202ENST00000558324 CYP4F30PQ9H0H9 118 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms