RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 NDUFB1O75438 58 aa11.56□□□□□ -0.56
CASC4-204ENST00000557945 UBR4Q5T4S7 5183 aa11.56□□□□□ -0.56
CASC4-204ENST00000557945 LINC00313P59037 77 aa11.55□□□□□ -0.56
CASC4-204ENST00000557945 A8MWP4 228 aa11.54□□□□□ -0.56
CASC4-204ENST00000557945 BPY2O14599 106 aa11.54□□□□□ -0.56
CASC4-204ENST00000557945 NOTCH2NLQ7Z3S9 236 aa11.52□□□□□ -0.57
CASC4-204ENST00000557945 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
CASC4-204ENST00000557945 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
CASC4-204ENST00000557945 SEC61BP60468 96 aaKnown RBP11.49□□□□□ -0.57
CASC4-204ENST00000557945 ACYP1P07311 99 aa11.48□□□□□ -0.57
CASC4-204ENST00000557945 PRR15Q8IV56 129 aa11.47□□□□□ -0.57
CASC4-204ENST00000557945 RPL37P61927 97 aaKnown RBP11.46□□□□□ -0.57
CASC4-204ENST00000557945 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
CASC4-204ENST00000557945 K7EQZ3 153 aa11.44□□□□□ -0.58
CASC4-204ENST00000557945 MUC17Q685J3 4493 aa11.44□□□□□ -0.58
CASC4-204ENST00000557945 C8orf17Q9NRJ1 99 aa11.43□□□□□ -0.58
CASC4-204ENST00000557945 Q75L30 129 aa11.42□□□□□ -0.58
CASC4-204ENST00000557945 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
CASC4-204ENST00000557945 PCOTHQ58A44 107 aa11.41□□□□□ -0.58
CASC4-204ENST00000557945 Q8N9L7 120 aa11.41□□□□□ -0.58
CASC4-204ENST00000557945 C20orf166-AS1Q96NR2 134 aa11.41□□□□□ -0.58
CASC4-204ENST00000557945 A8MUU9 505 aa11.39□□□□□ -0.59
CASC4-204ENST00000557945 J3QR89 54 aa11.38□□□□□ -0.59
CASC4-204ENST00000557945 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
CASC4-204ENST00000557945 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
CASC4-204ENST00000557945 CXCL6P80162 114 aa11.34□□□□□ -0.59
CASC4-204ENST00000557945 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
CASC4-204ENST00000557945 hDV103S1A0JD37 113 aa11.3□□□□□ -0.6
CASC4-204ENST00000557945 TMEM254Q8TBM7 123 aa11.28□□□□□ -0.6
CASC4-204ENST00000557945 WFDC13Q8IUB5 93 aa11.28□□□□□ -0.6
CASC4-204ENST00000557945 ATP5EP2Q5VTU8 51 aa11.27□□□□□ -0.61
CASC4-204ENST00000557945 MRPL34Q9BQ48 92 aaKnown RBP11.27□□□□□ -0.61
CASC4-204ENST00000557945 Q8N9P0 234 aaPredicted RBP11.26□□□□□ -0.61
CASC4-204ENST00000557945 KRTAP4-1Q9BYQ7 146 aa11.26□□□□□ -0.61
CASC4-204ENST00000557945 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
CASC4-204ENST00000557945 LINC00643Q86TS7 51 aa11.25□□□□□ -0.61
CASC4-204ENST00000557945 HCG22E2RYF7 251 aa11.22□□□□□ -0.61
CASC4-204ENST00000557945 NDUFS5O43920 106 aa11.21□□□□□ -0.61
CASC4-204ENST00000557945 MUC2Q02817 5179 aa11.2□□□□□ -0.62
CASC4-204ENST00000557945 K7ERU9 68 aa11.19□□□□□ -0.62
CASC4-204ENST00000557945 HIST1H4AP62805 103 aaKnown RBP11.17□□□□□ -0.62
CASC4-204ENST00000557945 ZCCHC13Q8WW36 166 aaKnown RBP11.16□□□□□ -0.62
CASC4-204ENST00000557945 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
CASC4-204ENST00000557945 A0A087WVE0 104 aa11.04□□□□□ -0.64
CASC4-204ENST00000557945 Q5W150 140 aa10.99□□□□□ -0.65
CASC4-204ENST00000557945 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
CASC4-204ENST00000557945 SPINK7P58062 85 aa10.96□□□□□ -0.65
CASC4-204ENST00000557945 MT-ATP8P03928 68 aa10.93□□□□□ -0.66
CASC4-204ENST00000557945 FAT4Q6V0I7 4981 aa10.9□□□□□ -0.66
CASC4-204ENST00000557945 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
CASC4-204ENST00000557945 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
CASC4-204ENST00000557945 COX6B2Q6YFQ2 88 aa10.89□□□□□ -0.67
CASC4-204ENST00000557945 KRTAP19-2Q3LHN2 52 aa10.88□□□□□ -0.67
CASC4-204ENST00000557945 HRES1P13985 223 aa10.87□□□□□ -0.67
CASC4-204ENST00000557945 IMUPQ9GZP8 106 aa10.87□□□□□ -0.67
CASC4-204ENST00000557945 C7orf65Q6ZTY9 151 aa10.84□□□□□ -0.67
CASC4-204ENST00000557945 LCE2CQ5TA81 110 aa10.83□□□□□ -0.68
CASC4-204ENST00000557945 RBM12B-AS1Q9P1G2 102 aa10.83□□□□□ -0.68
CASC4-204ENST00000557945 UQCRQO14949 82 aa10.82□□□□□ -0.68
CASC4-204ENST00000557945 SCGB1A1P11684 91 aa10.8□□□□□ -0.68
CASC4-204ENST00000557945 TRAV22A0A0B4J277 110 aa10.79□□□□□ -0.68
CASC4-204ENST00000557945 FAM236DA0A1B0GTK5 79 aa10.79□□□□□ -0.68
CASC4-204ENST00000557945 FAM236CP0DP71 79 aa10.79□□□□□ -0.68
CASC4-204ENST00000557945 MPLKIPQ8TAP9 179 aa10.77□□□□□ -0.68
CASC4-204ENST00000557945 OCR1Q9BZK8 76 aa10.75□□□□□ -0.69
CASC4-204ENST00000557945 H0Y9P7 68 aa10.73□□□□□ -0.69
CASC4-204ENST00000557945 FAM236AA0A1B0GUQ0 79 aa10.71□□□□□ -0.69
CASC4-204ENST00000557945 FAM236BA0A1B0GV22 79 aa10.71□□□□□ -0.69
CASC4-204ENST00000557945 ATOX1O00244 68 aa10.7□□□□□ -0.7
CASC4-204ENST00000557945 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
CASC4-204ENST00000557945 LOC101927531A0A1B0GV80 90 aa10.68□□□□□ -0.7
CASC4-204ENST00000557945 MT1HP80294 61 aa10.68□□□□□ -0.7
CASC4-204ENST00000557945 MP68P56378 58 aa10.65□□□□□ -0.71
CASC4-204ENST00000557945 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.71
CASC4-204ENST00000557945 C4orf26Q17RF5 130 aa10.63□□□□□ -0.71
CASC4-204ENST00000557945 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
CASC4-204ENST00000557945 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
CASC4-204ENST00000557945 LINC00208Q96KT6 92 aa10.62□□□□□ -0.71
CASC4-204ENST00000557945 M0R2T5 61 aa10.6□□□□□ -0.71
CASC4-204ENST00000557945 SMIM20Q8N5G0 67 aa10.59□□□□□ -0.71
CASC4-204ENST00000557945 FLGP20930 4061 aaPredicted RBP10.56□□□□□ -0.72
CASC4-204ENST00000557945 TRAV7A0A075B6U4 112 aa10.55□□□□□ -0.72
CASC4-204ENST00000557945 H3BPC8 53 aa10.52□□□□□ -0.72
CASC4-204ENST00000557945 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
CASC4-204ENST00000557945 KLKP1Q107X0 134 aa10.45□□□□□ -0.74
CASC4-204ENST00000557945 KRTAP3-1Q9BYR8 98 aa10.43□□□□□ -0.74
CASC4-204ENST00000557945 SERP2Q8N6R1 65 aa10.4□□□□□ -0.74
CASC4-204ENST00000557945 KRTAP10-6P60371 365 aaPredicted RBP10.39□□□□□ -0.75
CASC4-204ENST00000557945 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
CASC4-204ENST00000557945 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
CASC4-204ENST00000557945 C20orf197Q8N268 126 aa10.3□□□□□ -0.76
CASC4-204ENST00000557945 S4R3F8 94 aa10.29□□□□□ -0.76
CASC4-204ENST00000557945 A8MUN3 132 aa10.26□□□□□ -0.77
CASC4-204ENST00000557945 COX7CP15954 63 aa10.24□□□□□ -0.77
CASC4-204ENST00000557945 LCA10Q71F78 164 aa10.22□□□□□ -0.77
CASC4-204ENST00000557945 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
CASC4-204ENST00000557945 KRTAP9-8Q9BYQ0 159 aa10.18□□□□□ -0.78
CASC4-204ENST00000557945 DMAC1Q96GE9 116 aa10.15□□□□□ -0.78
CASC4-204ENST00000557945 CSAG1Q6PB30 78 aa10.14□□□□□ -0.79
CASC4-204ENST00000557945 MT2AP02795 61 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 307 ms