RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 LCE2CQ5TA81 110 aa10.38□□□□□ -0.75
HIF1A-211ENST00000557446 A0A1B0GW54 56 aa10.36□□□□□ -0.75
HIF1A-211ENST00000557446 KRTAP16-1A8MUX0 517 aa10.36□□□□□ -0.75
HIF1A-211ENST00000557446 NOTCH2NLQ7Z3S9 236 aa10.36□□□□□ -0.75
HIF1A-211ENST00000557446 SPCS1Q9Y6A9 102 aa10.35□□□□□ -0.75
HIF1A-211ENST00000557446 A0A1B0GVX0 72 aa10.34□□□□□ -0.75
HIF1A-211ENST00000557446 J3KT08 172 aa10.34□□□□□ -0.75
HIF1A-211ENST00000557446 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
HIF1A-211ENST00000557446 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
HIF1A-211ENST00000557446 COX6B2Q6YFQ2 88 aa10.27□□□□□ -0.77
HIF1A-211ENST00000557446 NDUFB1O75438 58 aa10.26□□□□□ -0.77
HIF1A-211ENST00000557446 MT1HP80294 61 aa10.26□□□□□ -0.77
HIF1A-211ENST00000557446 A8MWP4 228 aa10.24□□□□□ -0.77
HIF1A-211ENST00000557446 PCP4L1A6NKN8 68 aa10.23□□□□□ -0.77
HIF1A-211ENST00000557446 NREPQ16612 68 aa10.23□□□□□ -0.77
HIF1A-211ENST00000557446 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.77
HIF1A-211ENST00000557446 K7EP34 96 aa10.2□□□□□ -0.78
HIF1A-211ENST00000557446 IGKV3D-7A0A0C4DH55 119 aa10.19□□□□□ -0.78
HIF1A-211ENST00000557446 C8orf17Q9NRJ1 99 aa10.18□□□□□ -0.78
HIF1A-211ENST00000557446 PRO0461Q9UI25 63 aa10.17□□□□□ -0.78
HIF1A-211ENST00000557446 PRR15Q8IV56 129 aa10.13□□□□□ -0.79
HIF1A-211ENST00000557446 Q8N9P0 234 aaPredicted RBP10.12□□□□□ -0.79
HIF1A-211ENST00000557446 KRTAP9-2Q9BYQ4 174 aa10.12□□□□□ -0.79
HIF1A-211ENST00000557446 GTF2H5Q6ZYL4 71 aa10.1□□□□□ -0.79
HIF1A-211ENST00000557446 ZCCHC13Q8WW36 166 aaKnown RBP10.1□□□□□ -0.79
HIF1A-211ENST00000557446 M0R2T5 61 aa10.09□□□□□ -0.79
HIF1A-211ENST00000557446 Q6ZVQ6 151 aa10.09□□□□□ -0.79
HIF1A-211ENST00000557446 K7EQZ3 153 aa10.08□□□□□ -0.8
HIF1A-211ENST00000557446 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
HIF1A-211ENST00000557446 BPY2O14599 106 aa10.07□□□□□ -0.8
HIF1A-211ENST00000557446 HRES1P13985 223 aa10.03□□□□□ -0.8
HIF1A-211ENST00000557446 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
HIF1A-211ENST00000557446 TMEM254Q8TBM7 123 aa10.03□□□□□ -0.8
HIF1A-211ENST00000557446 MRPL34Q9BQ48 92 aaKnown RBP10.02□□□□□ -0.81
HIF1A-211ENST00000557446 FLGP20930 4061 aaPredicted RBP10.01□□□□□ -0.81
HIF1A-211ENST00000557446 LORP23490 312 aaPredicted RBP10.01□□□□□ -0.81
HIF1A-211ENST00000557446 hDV103S1A0JD37 113 aa10□□□□□ -0.81
HIF1A-211ENST00000557446 FAM236DA0A1B0GTK5 79 aa9.99□□□□□ -0.81
HIF1A-211ENST00000557446 F8W1H4 67 aa9.99□□□□□ -0.81
HIF1A-211ENST00000557446 FAM236CP0DP71 79 aa9.99□□□□□ -0.81
HIF1A-211ENST00000557446 LINC00846Q9NV44 126 aa9.99□□□□□ -0.81
HIF1A-211ENST00000557446 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
HIF1A-211ENST00000557446 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
HIF1A-211ENST00000557446 UBL5Q9BZL1 73 aa9.98□□□□□ -0.81
HIF1A-211ENST00000557446 Q8N9L7 120 aa9.97□□□□□ -0.81
HIF1A-211ENST00000557446 SPINK7P58062 85 aa9.96□□□□□ -0.82
HIF1A-211ENST00000557446 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
HIF1A-211ENST00000557446 NDUFS5O43920 106 aa9.94□□□□□ -0.82
HIF1A-211ENST00000557446 WFDC13Q8IUB5 93 aa9.93□□□□□ -0.82
HIF1A-211ENST00000557446 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
HIF1A-211ENST00000557446 CASC2Q6XLA1 102 aa9.89□□□□□ -0.83
HIF1A-211ENST00000557446 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
HIF1A-211ENST00000557446 Q5W150 140 aa9.79□□□□□ -0.84
HIF1A-211ENST00000557446 CXCL6P80162 114 aa9.77□□□□□ -0.85
HIF1A-211ENST00000557446 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
HIF1A-211ENST00000557446 IGKV2-30P06310 120 aa9.75□□□□□ -0.85
HIF1A-211ENST00000557446 C7orf65Q6ZTY9 151 aa9.74□□□□□ -0.85
HIF1A-211ENST00000557446 KRTAP9-8Q9BYQ0 159 aa9.72□□□□□ -0.85
HIF1A-211ENST00000557446 KRTAP9-6A0A140TA67 174 aa9.71□□□□□ -0.86
HIF1A-211ENST00000557446 ACYP1P07311 99 aa9.7□□□□□ -0.86
HIF1A-211ENST00000557446 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
HIF1A-211ENST00000557446 A0A1B0GV90 55 aa9.67□□□□□ -0.86
HIF1A-211ENST00000557446 MT2AP02795 61 aa9.61□□□□□ -0.87
HIF1A-211ENST00000557446 ATP5EP2Q5VTU8 51 aa9.6□□□□□ -0.87
HIF1A-211ENST00000557446 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
HIF1A-211ENST00000557446 H1FX-AS1Q4G0G2 97 aa9.59□□□□□ -0.87
HIF1A-211ENST00000557446 CRCT1Q9UGL9 99 aa9.58□□□□□ -0.88
HIF1A-211ENST00000557446 MT1FP04733 61 aa9.55□□□□□ -0.88
HIF1A-211ENST00000557446 C4orf26Q17RF5 130 aa9.55□□□□□ -0.88
HIF1A-211ENST00000557446 HIST1H4AP62805 103 aaKnown RBP9.53□□□□□ -0.88
HIF1A-211ENST00000557446 FSIP2Q5CZC0 6907 aa9.51□□□□□ -0.89
HIF1A-211ENST00000557446 KRTAP10-10P60014 251 aa9.5□□□□□ -0.89
HIF1A-211ENST00000557446 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
HIF1A-211ENST00000557446 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
HIF1A-211ENST00000557446 A0A087WVE0 104 aa9.42□□□□□ -0.9
HIF1A-211ENST00000557446 KRTAP9-3Q9BYQ3 159 aa9.4□□□□□ -0.9
HIF1A-211ENST00000557446 C1orf64Q8NEQ6 169 aa9.39□□□□□ -0.91
HIF1A-211ENST00000557446 J3QR89 54 aa9.38□□□□□ -0.91
HIF1A-211ENST00000557446 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
HIF1A-211ENST00000557446 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
HIF1A-211ENST00000557446 UQCRQO14949 82 aa9.37□□□□□ -0.91
HIF1A-211ENST00000557446 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
HIF1A-211ENST00000557446 H0Y9P7 68 aa9.33□□□□□ -0.92
HIF1A-211ENST00000557446 LCE2BO14633 110 aa9.33□□□□□ -0.92
HIF1A-211ENST00000557446 S4R3F8 94 aa9.32□□□□□ -0.92
HIF1A-211ENST00000557446 ATOX1O00244 68 aa9.3□□□□□ -0.92
HIF1A-211ENST00000557446 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
HIF1A-211ENST00000557446 LCA10Q71F78 164 aa9.25□□□□□ -0.93
HIF1A-211ENST00000557446 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
HIF1A-211ENST00000557446 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
HIF1A-211ENST00000557446 USH2AO75445 5202 aa9.2□□□□□ -0.94
HIF1A-211ENST00000557446 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
HIF1A-211ENST00000557446 MP68P56378 58 aa9.16□□□□□ -0.94
HIF1A-211ENST00000557446 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
HIF1A-211ENST00000557446 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
HIF1A-211ENST00000557446 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
HIF1A-211ENST00000557446 SSPOA2VEC9 5147 aa9.11□□□□□ -0.95
HIF1A-211ENST00000557446 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
HIF1A-211ENST00000557446 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
HIF1A-211ENST00000557446 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 2282.5 ms