RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
SNX6-210ENST00000557341 SCGB1C2P0DMR2 95 aa7.08□□□□□ -1.28
SNX6-210ENST00000557341 USH2AO75445 5202 aa7.08□□□□□ -1.28
SNX6-210ENST00000557341 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
SNX6-210ENST00000557341 J3KT08 172 aa7.05□□□□□ -1.28
SNX6-210ENST00000557341 MT2AP02795 61 aa7.05□□□□□ -1.28
SNX6-210ENST00000557341 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
SNX6-210ENST00000557341 C9JAW5 83 aa7.04□□□□□ -1.28
SNX6-210ENST00000557341 MTURNQ8N3F0 131 aa7.02□□□□□ -1.29
SNX6-210ENST00000557341 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
SNX6-210ENST00000557341 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
SNX6-210ENST00000557341 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
SNX6-210ENST00000557341 MT1FP04733 61 aa7□□□□□ -1.29
SNX6-210ENST00000557341 Q6ZQT0 140 aa7□□□□□ -1.29
SNX6-210ENST00000557341 NDUFB1O75438 58 aa6.99□□□□□ -1.29
SNX6-210ENST00000557341 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
SNX6-210ENST00000557341 JMJD7-PLA2G4BH0Y9G9 81 aa6.97□□□□□ -1.29
SNX6-210ENST00000557341 SPINK7P58062 85 aa6.97□□□□□ -1.29
SNX6-210ENST00000557341 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SNX6-210ENST00000557341 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SNX6-210ENST00000557341 ATXN8Q156A1 80 aa6.96□□□□□ -1.3
SNX6-210ENST00000557341 A0A1B0GW54 56 aa6.95□□□□□ -1.3
SNX6-210ENST00000557341 A8MWP4 228 aa6.95□□□□□ -1.3
SNX6-210ENST00000557341 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
SNX6-210ENST00000557341 M0R143 59 aa6.94□□□□□ -1.3
SNX6-210ENST00000557341 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
SNX6-210ENST00000557341 LCE2BO14633 110 aa6.93□□□□□ -1.3
SNX6-210ENST00000557341 LYRM7Q5U5X0 104 aa6.93□□□□□ -1.3
SNX6-210ENST00000557341 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
SNX6-210ENST00000557341 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
SNX6-210ENST00000557341 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
SNX6-210ENST00000557341 PDE6GP18545 87 aa6.91□□□□□ -1.3
SNX6-210ENST00000557341 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
SNX6-210ENST00000557341 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
SNX6-210ENST00000557341 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.31
SNX6-210ENST00000557341 Q6ZVQ6 151 aa6.89□□□□□ -1.31
SNX6-210ENST00000557341 C14orf132Q9NPU4 83 aa6.89□□□□□ -1.31
SNX6-210ENST00000557341 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
SNX6-210ENST00000557341 NREPQ16612 68 aa6.85□□□□□ -1.31
SNX6-210ENST00000557341 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
SNX6-210ENST00000557341 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
SNX6-210ENST00000557341 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
SNX6-210ENST00000557341 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
SNX6-210ENST00000557341 SMIM6P0DI80 62 aa6.8□□□□□ -1.32
SNX6-210ENST00000557341 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
SNX6-210ENST00000557341 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
SNX6-210ENST00000557341 K7EQZ3 153 aa6.78□□□□□ -1.32
SNX6-210ENST00000557341 NDUFS5O43920 106 aa6.77□□□□□ -1.33
SNX6-210ENST00000557341 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
SNX6-210ENST00000557341 H3BT86 120 aa6.76□□□□□ -1.33
SNX6-210ENST00000557341 BATFQ16520 125 aa6.76□□□□□ -1.33
SNX6-210ENST00000557341 TSTD3H0UI37 97 aa6.75□□□□□ -1.33
SNX6-210ENST00000557341 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
SNX6-210ENST00000557341 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
SNX6-210ENST00000557341 BPY2O14599 106 aa6.72□□□□□ -1.33
SNX6-210ENST00000557341 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
SNX6-210ENST00000557341 C7orf65Q6ZTY9 151 aa6.72□□□□□ -1.33
SNX6-210ENST00000557341 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
SNX6-210ENST00000557341 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
SNX6-210ENST00000557341 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
SNX6-210ENST00000557341 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
SNX6-210ENST00000557341 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
SNX6-210ENST00000557341 Q5W150 140 aa6.66□□□□□ -1.34
SNX6-210ENST00000557341 CASC2Q6XLA1 102 aa6.65□□□□□ -1.34
SNX6-210ENST00000557341 HCG22E2RYF7 251 aa6.64□□□□□ -1.35
SNX6-210ENST00000557341 Q8N9L7 120 aa6.64□□□□□ -1.35
SNX6-210ENST00000557341 CXCL6P80162 114 aa6.6□□□□□ -1.35
SNX6-210ENST00000557341 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
SNX6-210ENST00000557341 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
SNX6-210ENST00000557341 UBL5Q9BZL1 73 aa6.55□□□□□ -1.36
SNX6-210ENST00000557341 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
SNX6-210ENST00000557341 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
SNX6-210ENST00000557341 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
SNX6-210ENST00000557341 FAM236AA0A1B0GUQ0 79 aa6.5□□□□□ -1.37
SNX6-210ENST00000557341 FAM236BA0A1B0GV22 79 aa6.5□□□□□ -1.37
SNX6-210ENST00000557341 S4R3F8 94 aa6.49□□□□□ -1.37
SNX6-210ENST00000557341 PRO0461Q9UI25 63 aa6.47□□□□□ -1.37
SNX6-210ENST00000557341 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
SNX6-210ENST00000557341 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
SNX6-210ENST00000557341 COL5A1-AS1Q5SY13 56 aa6.45□□□□□ -1.38
SNX6-210ENST00000557341 C1orf64Q8NEQ6 169 aa6.45□□□□□ -1.38
SNX6-210ENST00000557341 K7EP34 96 aa6.44□□□□□ -1.38
SNX6-210ENST00000557341 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
SNX6-210ENST00000557341 LCA10Q71F78 164 aa6.44□□□□□ -1.38
SNX6-210ENST00000557341 TP53AIP1Q9HCN2 124 aa6.44□□□□□ -1.38
SNX6-210ENST00000557341 Q5VV11 94 aa6.4□□□□□ -1.38
SNX6-210ENST00000557341 A6NN06 94 aa6.39□□□□□ -1.39
SNX6-210ENST00000557341 MT1BP07438 61 aa6.38□□□□□ -1.39
SNX6-210ENST00000557341 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SNX6-210ENST00000557341 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
SNX6-210ENST00000557341 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
SNX6-210ENST00000557341 KLKP1Q107X0 134 aa6.34□□□□□ -1.39
SNX6-210ENST00000557341 F8W1H4 67 aa6.32□□□□□ -1.4
SNX6-210ENST00000557341 ETDBQ3ZM63 59 aa6.31□□□□□ -1.4
SNX6-210ENST00000557341 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
SNX6-210ENST00000557341 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
SNX6-210ENST00000557341 NEBP20929 6669 aa6.29□□□□□ -1.4
SNX6-210ENST00000557341 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
SNX6-210ENST00000557341 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
SNX6-210ENST00000557341 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 437.7 ms