RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LINC00313P59037 77 aa6.44□□□□□ -1.38
SRP54-206ENST00000555317 Q6ZQT0 140 aa6.44□□□□□ -1.38
SRP54-206ENST00000555317 LINC00472Q9H8W2 130 aa6.44□□□□□ -1.38
SRP54-206ENST00000555317 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
SRP54-206ENST00000555317 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
SRP54-206ENST00000555317 A0A1B0GW54 56 aa6.42□□□□□ -1.38
SRP54-206ENST00000555317 H3BT86 120 aa6.42□□□□□ -1.38
SRP54-206ENST00000555317 J3KT08 172 aa6.42□□□□□ -1.38
SRP54-206ENST00000555317 COL5A1-AS1Q5SY13 56 aa6.42□□□□□ -1.38
SRP54-206ENST00000555317 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
SRP54-206ENST00000555317 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
SRP54-206ENST00000555317 MTURNQ8N3F0 131 aa6.4□□□□□ -1.38
SRP54-206ENST00000555317 A8MUU9 505 aa6.39□□□□□ -1.39
SRP54-206ENST00000555317 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.39□□□□□ -1.39
SRP54-206ENST00000555317 NDUFB1O75438 58 aa6.39□□□□□ -1.39
SRP54-206ENST00000555317 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
SRP54-206ENST00000555317 C8orf87E5RJ46 101 aa6.38□□□□□ -1.39
SRP54-206ENST00000555317 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
SRP54-206ENST00000555317 KRTAP9-2Q9BYQ4 174 aa6.38□□□□□ -1.39
SRP54-206ENST00000555317 NREPQ16612 68 aa6.36□□□□□ -1.39
SRP54-206ENST00000555317 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
SRP54-206ENST00000555317 PCP4L1A6NKN8 68 aa6.34□□□□□ -1.39
SRP54-206ENST00000555317 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
SRP54-206ENST00000555317 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
SRP54-206ENST00000555317 A8MWP4 228 aa6.32□□□□□ -1.4
SRP54-206ENST00000555317 K7EP34 96 aa6.31□□□□□ -1.4
SRP54-206ENST00000555317 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
SRP54-206ENST00000555317 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
SRP54-206ENST00000555317 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
SRP54-206ENST00000555317 IGKV3D-7A0A0C4DH55 119 aa6.27□□□□□ -1.41
SRP54-206ENST00000555317 M0R2T5 61 aa6.26□□□□□ -1.41
SRP54-206ENST00000555317 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
SRP54-206ENST00000555317 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
SRP54-206ENST00000555317 BPY2O14599 106 aa6.25□□□□□ -1.41
SRP54-206ENST00000555317 MT1HP80294 61 aa6.25□□□□□ -1.41
SRP54-206ENST00000555317 Q6ZVQ6 151 aa6.24□□□□□ -1.41
SRP54-206ENST00000555317 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
SRP54-206ENST00000555317 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
SRP54-206ENST00000555317 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
SRP54-206ENST00000555317 K7EQZ3 153 aa6.21□□□□□ -1.42
SRP54-206ENST00000555317 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
SRP54-206ENST00000555317 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
SRP54-206ENST00000555317 UBL5Q9BZL1 73 aa6.21□□□□□ -1.42
SRP54-206ENST00000555317 F8W1H4 67 aa6.2□□□□□ -1.42
SRP54-206ENST00000555317 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
SRP54-206ENST00000555317 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
SRP54-206ENST00000555317 RBM12B-AS1Q9P1G2 102 aa6.2□□□□□ -1.42
SRP54-206ENST00000555317 MMP24-AS1A0A0U1RRL7 71 aa6.19□□□□□ -1.42
SRP54-206ENST00000555317 hDV103S1A0JD37 113 aa6.19□□□□□ -1.42
SRP54-206ENST00000555317 NDUFS5O43920 106 aa6.18□□□□□ -1.42
SRP54-206ENST00000555317 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
SRP54-206ENST00000555317 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
SRP54-206ENST00000555317 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
SRP54-206ENST00000555317 LINC00846Q9NV44 126 aa6.15□□□□□ -1.42
SRP54-206ENST00000555317 SPINK7P58062 85 aa6.14□□□□□ -1.43
SRP54-206ENST00000555317 Q8N9L7 120 aa6.14□□□□□ -1.43
SRP54-206ENST00000555317 HRES1P13985 223 aa6.13□□□□□ -1.43
SRP54-206ENST00000555317 CASC2Q6XLA1 102 aa6.13□□□□□ -1.43
SRP54-206ENST00000555317 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
SRP54-206ENST00000555317 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
SRP54-206ENST00000555317 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
SRP54-206ENST00000555317 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
SRP54-206ENST00000555317 HCG22E2RYF7 251 aa6.07□□□□□ -1.44
SRP54-206ENST00000555317 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
SRP54-206ENST00000555317 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
SRP54-206ENST00000555317 CXCL6P80162 114 aa6.06□□□□□ -1.44
SRP54-206ENST00000555317 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
SRP54-206ENST00000555317 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
SRP54-206ENST00000555317 ACYP1P07311 99 aa6.03□□□□□ -1.44
SRP54-206ENST00000555317 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
SRP54-206ENST00000555317 Q5W150 140 aa6□□□□□ -1.45
SRP54-206ENST00000555317 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
SRP54-206ENST00000555317 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
SRP54-206ENST00000555317 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
SRP54-206ENST00000555317 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
SRP54-206ENST00000555317 A0A1B0GV90 55 aa5.96□□□□□ -1.46
SRP54-206ENST00000555317 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
SRP54-206ENST00000555317 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
SRP54-206ENST00000555317 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
SRP54-206ENST00000555317 J3QR89 54 aa5.88□□□□□ -1.47
SRP54-206ENST00000555317 C4orf26Q17RF5 130 aa5.88□□□□□ -1.47
SRP54-206ENST00000555317 LINC00643Q86TS7 51 aa5.88□□□□□ -1.47
SRP54-206ENST00000555317 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
SRP54-206ENST00000555317 MT2AP02795 61 aa5.87□□□□□ -1.47
SRP54-206ENST00000555317 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SRP54-206ENST00000555317 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
SRP54-206ENST00000555317 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
SRP54-206ENST00000555317 MT1FP04733 61 aa5.82□□□□□ -1.48
SRP54-206ENST00000555317 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
SRP54-206ENST00000555317 UQCRQO14949 82 aa5.81□□□□□ -1.48
SRP54-206ENST00000555317 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
SRP54-206ENST00000555317 A0A087WVE0 104 aa5.8□□□□□ -1.48
SRP54-206ENST00000555317 ATOX1O00244 68 aa5.8□□□□□ -1.48
SRP54-206ENST00000555317 H0Y9P7 68 aa5.78□□□□□ -1.48
SRP54-206ENST00000555317 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
SRP54-206ENST00000555317 S4R3F8 94 aa5.78□□□□□ -1.48
SRP54-206ENST00000555317 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
SRP54-206ENST00000555317 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
SRP54-206ENST00000555317 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
SRP54-206ENST00000555317 USH2AO75445 5202 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms