RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
SHMT2-214ENST00000554604 Q8N9L7 120 aa7.18□□□□□ -1.26
SHMT2-214ENST00000554604 RETNLBQ9BQ08 111 aa7.17□□□□□ -1.26
SHMT2-214ENST00000554604 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
SHMT2-214ENST00000554604 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.26
SHMT2-214ENST00000554604 K7EQZ3 153 aa7.14□□□□□ -1.27
SHMT2-214ENST00000554604 MOBPQ13875 183 aa7.14□□□□□ -1.27
SHMT2-214ENST00000554604 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
SHMT2-214ENST00000554604 J3KT08 172 aa7.12□□□□□ -1.27
SHMT2-214ENST00000554604 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
SHMT2-214ENST00000554604 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
SHMT2-214ENST00000554604 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
SHMT2-214ENST00000554604 A8MWP4 228 aa7.09□□□□□ -1.27
SHMT2-214ENST00000554604 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
SHMT2-214ENST00000554604 CD164Q04900 197 aa7.09□□□□□ -1.27
SHMT2-214ENST00000554604 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
SHMT2-214ENST00000554604 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
SHMT2-214ENST00000554604 SPINK1P00995 79 aa7.07□□□□□ -1.28
SHMT2-214ENST00000554604 TPRXLQ17RH7 258 aa7.07□□□□□ -1.28
SHMT2-214ENST00000554604 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
SHMT2-214ENST00000554604 Q96NJ1 140 aa7.07□□□□□ -1.28
SHMT2-214ENST00000554604 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
SHMT2-214ENST00000554604 HRCT1Q6UXD1 115 aa7.05□□□□□ -1.28
SHMT2-214ENST00000554604 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
SHMT2-214ENST00000554604 NDUFB1O75438 58 aa7.04□□□□□ -1.28
SHMT2-214ENST00000554604 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
SHMT2-214ENST00000554604 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
SHMT2-214ENST00000554604 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
SHMT2-214ENST00000554604 TMEM258P61165 79 aa7.02□□□□□ -1.29
SHMT2-214ENST00000554604 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
SHMT2-214ENST00000554604 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
SHMT2-214ENST00000554604 CASC2Q6XLA1 102 aa7□□□□□ -1.29
SHMT2-214ENST00000554604 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
SHMT2-214ENST00000554604 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
SHMT2-214ENST00000554604 MUC2Q02817 5179 aa6.99□□□□□ -1.29
SHMT2-214ENST00000554604 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
SHMT2-214ENST00000554604 NDUFC1O43677 76 aa6.99□□□□□ -1.29
SHMT2-214ENST00000554604 Q5XG85 94 aa6.98□□□□□ -1.29
SHMT2-214ENST00000554604 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
SHMT2-214ENST00000554604 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
SHMT2-214ENST00000554604 H7BZZ5 65 aa6.96□□□□□ -1.3
SHMT2-214ENST00000554604 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
SHMT2-214ENST00000554604 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
SHMT2-214ENST00000554604 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
SHMT2-214ENST00000554604 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
SHMT2-214ENST00000554604 MUC17Q685J3 4493 aa6.92□□□□□ -1.3
SHMT2-214ENST00000554604 LIMD2Q9BT23 127 aa6.92□□□□□ -1.3
SHMT2-214ENST00000554604 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SHMT2-214ENST00000554604 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
SHMT2-214ENST00000554604 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
SHMT2-214ENST00000554604 H3BPC8 53 aa6.9□□□□□ -1.3
SHMT2-214ENST00000554604 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
SHMT2-214ENST00000554604 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SHMT2-214ENST00000554604 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
SHMT2-214ENST00000554604 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
SHMT2-214ENST00000554604 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
SHMT2-214ENST00000554604 MP68P56378 58 aa6.88□□□□□ -1.31
SHMT2-214ENST00000554604 C1orf195Q5TG92 126 aa6.88□□□□□ -1.31
SHMT2-214ENST00000554604 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
SHMT2-214ENST00000554604 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
SHMT2-214ENST00000554604 H0Y9P7 68 aa6.86□□□□□ -1.31
SHMT2-214ENST00000554604 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
SHMT2-214ENST00000554604 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
SHMT2-214ENST00000554604 XP32Q5T750 250 aa6.82□□□□□ -1.32
SHMT2-214ENST00000554604 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
SHMT2-214ENST00000554604 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
SHMT2-214ENST00000554604 LINC00313P59037 77 aa6.8□□□□□ -1.32
SHMT2-214ENST00000554604 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
SHMT2-214ENST00000554604 NDUFS5O43920 106 aa6.79□□□□□ -1.32
SHMT2-214ENST00000554604 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
SHMT2-214ENST00000554604 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
SHMT2-214ENST00000554604 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
SHMT2-214ENST00000554604 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
SHMT2-214ENST00000554604 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
SHMT2-214ENST00000554604 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
SHMT2-214ENST00000554604 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
SHMT2-214ENST00000554604 CYP4F30PQ9H0H9 118 aa6.74□□□□□ -1.33
SHMT2-214ENST00000554604 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
SHMT2-214ENST00000554604 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
SHMT2-214ENST00000554604 Q5W150 140 aa6.69□□□□□ -1.34
SHMT2-214ENST00000554604 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
SHMT2-214ENST00000554604 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
SHMT2-214ENST00000554604 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
SHMT2-214ENST00000554604 IGKV2-30P06310 120 aa6.6□□□□□ -1.35
SHMT2-214ENST00000554604 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
SHMT2-214ENST00000554604 A8MUU9 505 aa6.56□□□□□ -1.36
SHMT2-214ENST00000554604 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
SHMT2-214ENST00000554604 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
SHMT2-214ENST00000554604 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
SHMT2-214ENST00000554604 Q75L30 129 aa6.54□□□□□ -1.36
SHMT2-214ENST00000554604 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
SHMT2-214ENST00000554604 HRES1P13985 223 aa6.52□□□□□ -1.37
SHMT2-214ENST00000554604 MT1HP80294 61 aa6.51□□□□□ -1.37
SHMT2-214ENST00000554604 COA5Q86WW8 74 aa6.51□□□□□ -1.37
SHMT2-214ENST00000554604 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SHMT2-214ENST00000554604 M0R2T5 61 aa6.48□□□□□ -1.37
SHMT2-214ENST00000554604 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
SHMT2-214ENST00000554604 Q1T7F1 81 aa6.48□□□□□ -1.37
SHMT2-214ENST00000554604 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SHMT2-214ENST00000554604 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms