RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LIMD2Q9BT23 127 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 TTTY13Q9BZ97 58 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 PRO1933Q9H354 126 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 J3QQQ9 107 aa1.02□□□□□ -2.25
CPSF6-207ENST00000551516 TIMM17BO60830 172 aa1.02□□□□□ -2.25
CPSF6-207ENST00000551516 MIEN1Q9BRT3 115 aa1.02□□□□□ -2.25
CPSF6-207ENST00000551516 SEC11CQ9BY50 192 aa1.02□□□□□ -2.25
CPSF6-207ENST00000551516 KRTAP2-1Q9BYU5 128 aa1.02□□□□□ -2.25
CPSF6-207ENST00000551516 MYMXA0A1B0GTQ4 84 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 LINC00587B1AMM8 73 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 H3BPC8 53 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 NDUFA6P56556 154 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 FABP9Q0Z7S8 132 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 JOSD1Q15040 202 aaPredicted RBP1.01□□□□□ -2.25
CPSF6-207ENST00000551516 BATFQ16520 125 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 C9orf153Q5TBE3 101 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 LINC00575Q6W349 94 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 COMMD7Q86VX2 200 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 CHCHD1Q96BP2 118 aaKnown RBP1.01□□□□□ -2.25
CPSF6-207ENST00000551516 SPANXDQ9BXN6 97 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 SPANXCQ9NY87 97 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 LAMTOR3Q9UHA4 124 aa1.01□□□□□ -2.25
CPSF6-207ENST00000551516 COX7BP24311 80 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 OCIAD2Q56VL3 154 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 LINC01545Q5VT33 79 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 ATP11AUNQ6ZP68 121 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 C2orf91Q6ZV80 131 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 SMIM11BQ8TCY0 68 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 ZCCHC13Q8WW36 166 aaKnown RBP1□□□□□ -2.25
CPSF6-207ENST00000551516 LINC00472Q9H8W2 130 aa1□□□□□ -2.25
CPSF6-207ENST00000551516 HMCN1Q96RW7 5635 aa0.99□□□□□ -2.25
CPSF6-207ENST00000551516 MT1XP80297 61 aa0.99□□□□□ -2.25
CPSF6-207ENST00000551516 RHEBQ15382 184 aa0.99□□□□□ -2.25
CPSF6-207ENST00000551516 CLEC2BQ92478 149 aa0.99□□□□□ -2.25
CPSF6-207ENST00000551516 PMCHL2Q9BQD1 86 aa0.99□□□□□ -2.25
CPSF6-207ENST00000551516 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 A0A1B0GW54 56 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 A6NN06 94 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 TCL1BO95988 128 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 IGKCP01834 107 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 PLNP26678 52 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 HINT1P49773 126 aaPredicted RBP0.98□□□□□ -2.25
CPSF6-207ENST00000551516 NPC2P61916 151 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 S100A7L2Q5SY68 101 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 Q6JHZ5 121 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 DEFB105AQ8NG35 78 aa0.98□□□□□ -2.25
CPSF6-207ENST00000551516 SYS1-DBNDD2H3BUS1 97 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 H3BUT2 72 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 DPM2O94777 84 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 TRGC2P03986 189 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 SPINK7P58062 85 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 Q6ZQY7 126 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 MUSTN1Q8IVN3 82 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 SMCO4Q9NRQ5 59 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 LINC00846Q9NV44 126 aa0.97□□□□□ -2.25
CPSF6-207ENST00000551516 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 LEPROTL1O95214 131 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 IFITM1P13164 125 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 SPRR2EP22531 72 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 SPRR2BP35325 72 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 SPRR2AP35326 72 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.96□□□□□ -2.26
CPSF6-207ENST00000551516 PPDPFLQ8WWR9 84 aa0.96□□□□□ -2.26
CPSF6-207ENST00000551516 A0A087WSZ3 146 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 hADV29S1A0JD25 119 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 LST1O00453 97 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BKO60814 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BJP06899 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 C3orf79P0CE67 100 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BOP23527 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 S100PP25815 95 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BBP33778 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BDP58876 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 TMEM258P61165 79 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BCP62807 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST2H2BEQ16778 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.95□□□□□ -2.26
CPSF6-207ENST00000551516 TEN1Q86WV5 123 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BHQ93079 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 SPRR2FQ96RM1 72 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BNQ99877 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H2BMQ99879 126 aa0.95□□□□□ -2.26
CPSF6-207ENST00000551516 TRBV20-1A0A075B6N2 111 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 TRAV13-2A0A0B4J235 113 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 TRBV7-4A0A0J9YYF1 115 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 ZNF815PA8K554 130 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 FABP4P15090 132 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 KRTAP12-3P60328 96 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 H1FX-AS1Q4G0G2 97 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 Q5VV11 94 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 OR13C6PQ8NH95 151 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 PRO2289Q9P1D8 64 aa0.94□□□□□ -2.26
CPSF6-207ENST00000551516 A8MUN3 132 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 S100A6P06703 90 aa0.93□□□□□ -2.26
CPSF6-207ENST00000551516 HIST1H4AP62805 103 aaKnown RBP0.93□□□□□ -2.26
CPSF6-207ENST00000551516 S100A12P80511 92 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms