RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 UTP20O75691 2785 aaKnown RBP2.93□□□□□ -1.94
LSM3P2-201ENST00000551246 IGF2RP11717 2491 aa2.92□□□□□ -1.94
LSM3P2-201ENST00000551246 NF1P21359 2839 aa2.92□□□□□ -1.94
LSM3P2-201ENST00000551246 H1FX-AS1Q4G0G2 97 aa2.92□□□□□ -1.94
LSM3P2-201ENST00000551246 F8P00451 2351 aa2.92□□□□□ -1.94
LSM3P2-201ENST00000551246 EPG5Q9HCE0 2579 aa2.91□□□□□ -1.94
LSM3P2-201ENST00000551246 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
LSM3P2-201ENST00000551246 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
LSM3P2-201ENST00000551246 DNAH17Q9UFH2 4485 aa2.9□□□□□ -1.95
LSM3P2-201ENST00000551246 A0A1B0GU33 70 aa2.9□□□□□ -1.95
LSM3P2-201ENST00000551246 NBEAL2Q6ZNJ1 2754 aa2.9□□□□□ -1.95
LSM3P2-201ENST00000551246 NAV2Q8IVL1 2488 aa2.9□□□□□ -1.95
LSM3P2-201ENST00000551246 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
LSM3P2-201ENST00000551246 IGLV9-49A0A0B4J1Y8 123 aa2.89□□□□□ -1.95
LSM3P2-201ENST00000551246 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
LSM3P2-201ENST00000551246 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
LSM3P2-201ENST00000551246 TEX15Q9BXT5 2789 aa2.88□□□□□ -1.95
LSM3P2-201ENST00000551246 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
LSM3P2-201ENST00000551246 C14orf177Q52M58 125 aa2.88□□□□□ -1.95
LSM3P2-201ENST00000551246 VPS13DQ5THJ4 4388 aa2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 SSBP3-AS1Q7Z2R9 100 aa2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 TYMSOSQ8TAI1 123 aa2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 UNC79Q9P2D8 2635 aa2.87□□□□□ -1.95
LSM3P2-201ENST00000551246 CFAP46Q8IYW2 2715 aa2.86□□□□□ -1.95
LSM3P2-201ENST00000551246 NIPBLQ6KC79 2804 aaeCLIP2.86□□□□□ -1.95
LSM3P2-201ENST00000551246 MUC6Q6W4X9 2439 aa2.86□□□□□ -1.95
LSM3P2-201ENST00000551246 SPACA4Q8TDM5 124 aa2.86□□□□□ -1.95
LSM3P2-201ENST00000551246 FBN2P35556 2912 aa2.86□□□□□ -1.95
LSM3P2-201ENST00000551246 CRYBG3Q68DQ2 2970 aa2.85□□□□□ -1.95
LSM3P2-201ENST00000551246 TTC28Q96AY4 2481 aa2.85□□□□□ -1.95
LSM3P2-201ENST00000551246 ZFHX2Q9C0A1 2572 aaPredicted RBP2.85□□□□□ -1.95
LSM3P2-201ENST00000551246 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
LSM3P2-201ENST00000551246 SONP18583 2426 aaKnown RBP2.84□□□□□ -1.95
LSM3P2-201ENST00000551246 DNAH3Q8TD57 4116 aa2.84□□□□□ -1.95
LSM3P2-201ENST00000551246 TRRAPQ9Y4A5 3859 aa2.84□□□□□ -1.95
LSM3P2-201ENST00000551246 LRRK2Q5S007 2527 aa2.84□□□□□ -1.96
LSM3P2-201ENST00000551246 MTORP42345 2549 aa2.83□□□□□ -1.96
LSM3P2-201ENST00000551246 COX6B2Q6YFQ2 88 aa2.83□□□□□ -1.96
LSM3P2-201ENST00000551246 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
LSM3P2-201ENST00000551246 CHD8Q9HCK8 2581 aa2.83□□□□□ -1.96
LSM3P2-201ENST00000551246 CCDC168Q8NDH2 2452 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 NBDYA0A0U1RRE5 68 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 K7ERS5 55 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 SPINK6Q6UWN8 80 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 PKD1L2Q7Z442 2459 aa2.82□□□□□ -1.96
LSM3P2-201ENST00000551246 MUC3AQ02505 3323 aa2.81□□□□□ -1.96
LSM3P2-201ENST00000551246 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
LSM3P2-201ENST00000551246 POLQO75417 2590 aa2.81□□□□□ -1.96
LSM3P2-201ENST00000551246 SRRM2Q9UQ35 2752 aaKnown RBP2.8□□□□□ -1.96
LSM3P2-201ENST00000551246 HUWE1Q7Z6Z7 4374 aaKnown RBP2.8□□□□□ -1.96
LSM3P2-201ENST00000551246 ANK2Q01484 3957 aa2.8□□□□□ -1.96
LSM3P2-201ENST00000551246 SPINK1P00995 79 aa2.79□□□□□ -1.96
LSM3P2-201ENST00000551246 RPL37P61927 97 aaKnown RBP2.79□□□□□ -1.96
LSM3P2-201ENST00000551246 SACSQ9NZJ4 4579 aa2.79□□□□□ -1.96
LSM3P2-201ENST00000551246 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
LSM3P2-201ENST00000551246 CSMD2Q7Z408 3487 aa2.78□□□□□ -1.96
LSM3P2-201ENST00000551246 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
LSM3P2-201ENST00000551246 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
LSM3P2-201ENST00000551246 ITPR3Q14573 2671 aa2.78□□□□□ -1.96
LSM3P2-201ENST00000551246 DNAH2Q9P225 4427 aa2.78□□□□□ -1.96
LSM3P2-201ENST00000551246 DNAH11Q96DT5 4516 aa2.77□□□□□ -1.97
LSM3P2-201ENST00000551246 PIEZO1Q92508 2521 aa2.77□□□□□ -1.97
LSM3P2-201ENST00000551246 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
LSM3P2-201ENST00000551246 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 CIRBP-AS1Q8TBR5 109 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 APLNQ9ULZ1 77 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 ZNF462Q96JM2 2506 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 ACACBO00763 2458 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 FRAS1Q86XX4 4008 aa2.76□□□□□ -1.97
LSM3P2-201ENST00000551246 PRKDCP78527 4128 aaKnown RBP2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 TENM3Q9P273 2699 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 LYSTQ99698 3801 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 DNAH6Q9C0G6 4158 aa2.75□□□□□ -1.97
LSM3P2-201ENST00000551246 VWFP04275 2813 aa2.74□□□□□ -1.97
LSM3P2-201ENST00000551246 FLNCQ14315 2725 aa2.74□□□□□ -1.97
LSM3P2-201ENST00000551246 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
LSM3P2-201ENST00000551246 CMYA5Q8N3K9 4069 aa2.73□□□□□ -1.97
LSM3P2-201ENST00000551246 UBR5O95071 2799 aaPredicted RBP2.73□□□□□ -1.97
LSM3P2-201ENST00000551246 ZNF469Q96JG9 3925 aaPredicted RBP2.73□□□□□ -1.97
LSM3P2-201ENST00000551246 BAHCC1Q9P281 2608 aa2.72□□□□□ -1.97
LSM3P2-201ENST00000551246 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
LSM3P2-201ENST00000551246 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
LSM3P2-201ENST00000551246 PKD1L1Q8TDX9 2849 aa2.71□□□□□ -1.98
LSM3P2-201ENST00000551246 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.98
LSM3P2-201ENST00000551246 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
LSM3P2-201ENST00000551246 CUBNO60494 3623 aa2.7□□□□□ -1.98
LSM3P2-201ENST00000551246 HELZ2Q9BYK8 2649 aaKnown RBP2.69□□□□□ -1.98
LSM3P2-201ENST00000551246 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
LSM3P2-201ENST00000551246 RPS29P62273 56 aaKnown RBP2.69□□□□□ -1.98
LSM3P2-201ENST00000551246 S4R3F8 94 aa2.69□□□□□ -1.98
LSM3P2-201ENST00000551246 NOTCH2Q04721 2471 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms