RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 IGHV6-1A0A0B4J1U7 121 aa11.63□□□□□ -0.55
NEK3-202ENST00000550841 A0A1B0GVX0 72 aa11.63□□□□□ -0.55
NEK3-202ENST00000550841 UBL5Q9BZL1 73 aa11.63□□□□□ -0.55
NEK3-202ENST00000550841 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
NEK3-202ENST00000550841 Q6ZVQ6 151 aa11.62□□□□□ -0.55
NEK3-202ENST00000550841 A8MWP4 228 aa11.61□□□□□ -0.55
NEK3-202ENST00000550841 DSCR10P59022 87 aa11.61□□□□□ -0.55
NEK3-202ENST00000550841 BPY2O14599 106 aa11.6□□□□□ -0.55
NEK3-202ENST00000550841 LINC00846Q9NV44 126 aa11.6□□□□□ -0.55
NEK3-202ENST00000550841 RPL37P61927 97 aaKnown RBP11.58□□□□□ -0.56
NEK3-202ENST00000550841 ACYP1P07311 99 aa11.56□□□□□ -0.56
NEK3-202ENST00000550841 Q75L30 129 aa11.56□□□□□ -0.56
NEK3-202ENST00000550841 MUC2Q02817 5179 aa11.55□□□□□ -0.56
NEK3-202ENST00000550841 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
NEK3-202ENST00000550841 PRR15Q8IV56 129 aa11.54□□□□□ -0.56
NEK3-202ENST00000550841 MUC17Q685J3 4493 aa11.53□□□□□ -0.56
NEK3-202ENST00000550841 NOTCH2NLQ7Z3S9 236 aa11.53□□□□□ -0.56
NEK3-202ENST00000550841 C20orf166-AS1Q96NR2 134 aa11.53□□□□□ -0.56
NEK3-202ENST00000550841 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
NEK3-202ENST00000550841 A8MUU9 505 aa11.5□□□□□ -0.57
NEK3-202ENST00000550841 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
NEK3-202ENST00000550841 ATP11AUNQ6ZP68 121 aa11.5□□□□□ -0.57
NEK3-202ENST00000550841 C8orf17Q9NRJ1 99 aa11.49□□□□□ -0.57
NEK3-202ENST00000550841 KRTAP16-1A8MUX0 517 aa11.48□□□□□ -0.57
NEK3-202ENST00000550841 K7EQZ3 153 aa11.45□□□□□ -0.58
NEK3-202ENST00000550841 KRTAP9-2Q9BYQ4 174 aa11.42□□□□□ -0.58
NEK3-202ENST00000550841 J3QR89 54 aa11.41□□□□□ -0.58
NEK3-202ENST00000550841 CXCL6P80162 114 aa11.41□□□□□ -0.58
NEK3-202ENST00000550841 MMP24-AS1A0A0U1RRL7 71 aa11.38□□□□□ -0.59
NEK3-202ENST00000550841 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
NEK3-202ENST00000550841 LCE2AQ5TA79 106 aaPredicted RBP11.36□□□□□ -0.59
NEK3-202ENST00000550841 Q8N9L7 120 aa11.36□□□□□ -0.59
NEK3-202ENST00000550841 Q8N9P0 234 aaPredicted RBP11.36□□□□□ -0.59
NEK3-202ENST00000550841 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
NEK3-202ENST00000550841 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
NEK3-202ENST00000550841 ATP5EP2Q5VTU8 51 aa11.32□□□□□ -0.6
NEK3-202ENST00000550841 KRTAP4-1Q9BYQ7 146 aa11.32□□□□□ -0.6
NEK3-202ENST00000550841 CASC2Q6XLA1 102 aa11.29□□□□□ -0.6
NEK3-202ENST00000550841 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
NEK3-202ENST00000550841 FAT4Q6V0I7 4981 aa11.28□□□□□ -0.6
NEK3-202ENST00000550841 WFDC13Q8IUB5 93 aa11.27□□□□□ -0.61
NEK3-202ENST00000550841 HCG22E2RYF7 251 aa11.26□□□□□ -0.61
NEK3-202ENST00000550841 ZCCHC13Q8WW36 166 aaKnown RBP11.25□□□□□ -0.61
NEK3-202ENST00000550841 NDUFS5O43920 106 aa11.24□□□□□ -0.61
NEK3-202ENST00000550841 K7ERU9 68 aa11.18□□□□□ -0.62
NEK3-202ENST00000550841 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
NEK3-202ENST00000550841 KRTAP9-6A0A140TA67 174 aa11.14□□□□□ -0.63
NEK3-202ENST00000550841 TP53AIP1Q9HCN2 124 aa11.08□□□□□ -0.64
NEK3-202ENST00000550841 SPINK7P58062 85 aa11.05□□□□□ -0.64
NEK3-202ENST00000550841 Q5W150 140 aa11.02□□□□□ -0.65
NEK3-202ENST00000550841 COX6B2Q6YFQ2 88 aa11□□□□□ -0.65
NEK3-202ENST00000550841 A0A087WVE0 104 aa10.98□□□□□ -0.65
NEK3-202ENST00000550841 KRTAP19-2Q3LHN2 52 aa10.98□□□□□ -0.65
NEK3-202ENST00000550841 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
NEK3-202ENST00000550841 HRES1P13985 223 aa10.95□□□□□ -0.66
NEK3-202ENST00000550841 LCE2CQ5TA81 110 aa10.94□□□□□ -0.66
NEK3-202ENST00000550841 IMUPQ9GZP8 106 aa10.93□□□□□ -0.66
NEK3-202ENST00000550841 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
NEK3-202ENST00000550841 IGKV2D-30A0A075B6S6 120 aa10.91□□□□□ -0.66
NEK3-202ENST00000550841 IGKV2-30P06310 120 aa10.91□□□□□ -0.66
NEK3-202ENST00000550841 MPLKIPQ8TAP9 179 aa10.9□□□□□ -0.66
NEK3-202ENST00000550841 UQCRQO14949 82 aa10.89□□□□□ -0.67
NEK3-202ENST00000550841 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
NEK3-202ENST00000550841 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
NEK3-202ENST00000550841 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
NEK3-202ENST00000550841 MT-ATP8P03928 68 aa10.86□□□□□ -0.67
NEK3-202ENST00000550841 TRAV22A0A0B4J277 110 aa10.84□□□□□ -0.67
NEK3-202ENST00000550841 SCGB1A1P11684 91 aa10.82□□□□□ -0.68
NEK3-202ENST00000550841 ATOX1O00244 68 aa10.79□□□□□ -0.68
NEK3-202ENST00000550841 MT1HP80294 61 aa10.79□□□□□ -0.68
NEK3-202ENST00000550841 LOC101927531A0A1B0GV80 90 aa10.76□□□□□ -0.69
NEK3-202ENST00000550841 OCR1Q9BZK8 76 aa10.76□□□□□ -0.69
NEK3-202ENST00000550841 H0Y9P7 68 aa10.75□□□□□ -0.69
NEK3-202ENST00000550841 CRCT1Q9UGL9 99 aa10.75□□□□□ -0.69
NEK3-202ENST00000550841 M0R2T5 61 aa10.72□□□□□ -0.69
NEK3-202ENST00000550841 C5orf47Q569G3 176 aa10.71□□□□□ -0.69
NEK3-202ENST00000550841 CYP4F30PQ9H0H9 118 aa10.71□□□□□ -0.69
NEK3-202ENST00000550841 MP68P56378 58 aa10.7□□□□□ -0.7
NEK3-202ENST00000550841 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
NEK3-202ENST00000550841 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
NEK3-202ENST00000550841 FAM236AA0A1B0GUQ0 79 aa10.66□□□□□ -0.7
NEK3-202ENST00000550841 FAM236BA0A1B0GV22 79 aa10.66□□□□□ -0.7
NEK3-202ENST00000550841 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
NEK3-202ENST00000550841 C1orf64Q8NEQ6 169 aa10.65□□□□□ -0.7
NEK3-202ENST00000550841 H3BPC8 53 aa10.63□□□□□ -0.71
NEK3-202ENST00000550841 LINC00208Q96KT6 92 aa10.63□□□□□ -0.71
NEK3-202ENST00000550841 H1FX-AS1Q4G0G2 97 aa10.62□□□□□ -0.71
NEK3-202ENST00000550841 FSIP2Q5CZC0 6907 aa10.6□□□□□ -0.71
NEK3-202ENST00000550841 TRAV7A0A075B6U4 112 aa10.57□□□□□ -0.72
NEK3-202ENST00000550841 KRTAP10-6P60371 365 aaPredicted RBP10.53□□□□□ -0.72
NEK3-202ENST00000550841 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
NEK3-202ENST00000550841 KRTAP3-1Q9BYR8 98 aa10.47□□□□□ -0.73
NEK3-202ENST00000550841 KLKP1Q107X0 134 aa10.45□□□□□ -0.74
NEK3-202ENST00000550841 SERP2Q8N6R1 65 aa10.41□□□□□ -0.74
NEK3-202ENST00000550841 A8MUN3 132 aa10.37□□□□□ -0.75
NEK3-202ENST00000550841 S4R3F8 94 aa10.37□□□□□ -0.75
NEK3-202ENST00000550841 KRTAP9-8Q9BYQ0 159 aa10.29□□□□□ -0.76
NEK3-202ENST00000550841 CSAG1Q6PB30 78 aa10.27□□□□□ -0.77
NEK3-202ENST00000550841 LCA10Q71F78 164 aa10.27□□□□□ -0.77
NEK3-202ENST00000550841 C20orf197Q8N268 126 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms