RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 CDC42BPAQ5VT25 1732 aa-2.51□□□□□ -2.81
DEPDC4-205ENST00000548313 MMP24-AS1A0A0U1RRL7 71 aa-2.51□□□□□ -2.81
DEPDC4-205ENST00000548313 KRTAP8-1Q8IUC2 63 aa-2.51□□□□□ -2.81
DEPDC4-205ENST00000548313 ADGRG4Q8IZF6 3080 aa-2.52□□□□□ -2.81
DEPDC4-205ENST00000548313 DIP2BQ9P265 1576 aa-2.52□□□□□ -2.81
DEPDC4-205ENST00000548313 IFI6P09912 130 aa-2.52□□□□□ -2.81
DEPDC4-205ENST00000548313 NCOA2Q15596 1464 aa-2.52□□□□□ -2.81
DEPDC4-205ENST00000548313 URB2Q14146 1524 aaKnown RBP-2.52□□□□□ -2.81
DEPDC4-205ENST00000548313 ZNF831Q5JPB2 1677 aa-2.53□□□□□ -2.81
DEPDC4-205ENST00000548313 RABAC1Q9UI14 185 aa-2.53□□□□□ -2.81
DEPDC4-205ENST00000548313 DEFB130BP0DP73 79 aa-2.54□□□□□ -2.82
DEPDC4-205ENST00000548313 DEFB130AP0DP74 79 aa-2.54□□□□□ -2.82
DEPDC4-205ENST00000548313 ARFGEF2Q9Y6D5 1785 aa-2.54□□□□□ -2.82
DEPDC4-205ENST00000548313 CCDC88BA6NC98 1476 aa-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 ACYP1P07311 99 aa-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 IAPPP10997 89 aa-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 DDX60LQ5H9U9 1706 aaKnown RBP-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 BOD1L1Q8NFC6 3051 aa-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 SNHG12Q9BXW3 62 aa-2.55□□□□□ -2.82
DEPDC4-205ENST00000548313 CEBPZOSA8MTT3 80 aa-2.56□□□□□ -2.82
DEPDC4-205ENST00000548313 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.56□□□□□ -2.82
DEPDC4-205ENST00000548313 SNRPFP62306 86 aaKnown RBP-2.57□□□□□ -2.82
DEPDC4-205ENST00000548313 MGAQ8IWI9 3026 aa-2.58□□□□□ -2.82
DEPDC4-205ENST00000548313 LINC00643Q86TS7 51 aa-2.58□□□□□ -2.82
DEPDC4-205ENST00000548313 IFI27P40305 119 aaPredicted RBP-2.59□□□□□ -2.82
DEPDC4-205ENST00000548313 DEFB4AO15263 64 aa-2.61□□□□□ -2.83
DEPDC4-205ENST00000548313 PKIAP61925 76 aa-2.61□□□□□ -2.83
DEPDC4-205ENST00000548313 PYY3Q5JQD4 70 aa-2.61□□□□□ -2.83
DEPDC4-205ENST00000548313 S100A8P05109 93 aa-2.62□□□□□ -2.83
DEPDC4-205ENST00000548313 THOC2Q8NI27 1593 aaKnown RBP-2.62□□□□□ -2.83
DEPDC4-205ENST00000548313 CSMD2Q7Z408 3487 aa-2.63□□□□□ -2.83
DEPDC4-205ENST00000548313 UMAD1C9J7I0 102 aa-2.63□□□□□ -2.83
DEPDC4-205ENST00000548313 PIK3C2BO00750 1634 aa-2.64□□□□□ -2.83
DEPDC4-205ENST00000548313 KRTAP19-6Q3LI70 58 aa-2.65□□□□□ -2.83
DEPDC4-205ENST00000548313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.65□□□□□ -2.83
DEPDC4-205ENST00000548313 MAP3K4Q9Y6R4 1608 aa-2.65□□□□□ -2.83
DEPDC4-205ENST00000548313 ITSN1Q15811 1721 aa-2.65□□□□□ -2.83
DEPDC4-205ENST00000548313 PLCH1Q4KWH8 1693 aa-2.66□□□□□ -2.83
DEPDC4-205ENST00000548313 ANKRD36CQ5JPF3 1778 aa-2.66□□□□□ -2.83
DEPDC4-205ENST00000548313 ABCC3O15438 1527 aa-2.66□□□□□ -2.84
DEPDC4-205ENST00000548313 LINC01546A6NGU7 62 aa-2.66□□□□□ -2.84
DEPDC4-205ENST00000548313 NDUFA4O00483 81 aa-2.66□□□□□ -2.84
DEPDC4-205ENST00000548313 CCNB3Q8WWL7 1395 aa-2.66□□□□□ -2.84
DEPDC4-205ENST00000548313 FREM2Q5SZK8 3169 aa-2.66□□□□□ -2.84
DEPDC4-205ENST00000548313 KIF14Q15058 1648 aa-2.68□□□□□ -2.84
DEPDC4-205ENST00000548313 IGLV5-48A0A075B6I7 105 aa-2.68□□□□□ -2.84
DEPDC4-205ENST00000548313 S100A16Q96FQ6 103 aaKnown RBP-2.68□□□□□ -2.84
DEPDC4-205ENST00000548313 PRUNE2Q8WUY3 3088 aa-2.7□□□□□ -2.84
DEPDC4-205ENST00000548313 PPLO60437 1756 aa-2.71□□□□□ -2.84
DEPDC4-205ENST00000548313 ZFHX4Q86UP3 3567 aa-2.72□□□□□ -2.85
DEPDC4-205ENST00000548313 ZC3H13Q5T200 1668 aaKnown RBP-2.73□□□□□ -2.85
DEPDC4-205ENST00000548313 DEFB131BA0A096LNP1 70 aa-2.74□□□□□ -2.85
DEPDC4-205ENST00000548313 CFAP43Q8NDM7 1665 aa-2.75□□□□□ -2.85
DEPDC4-205ENST00000548313 Q9H521 79 aa-2.75□□□□□ -2.85
DEPDC4-205ENST00000548313 NOP10Q9NPE3 64 aaKnown RBP-2.75□□□□□ -2.85
DEPDC4-205ENST00000548313 PARP4Q9UKK3 1724 aaKnown RBP-2.76□□□□□ -2.85
DEPDC4-205ENST00000548313 TOGARAM1Q9Y4F4 1720 aa-2.76□□□□□ -2.85
DEPDC4-205ENST00000548313 HMGA1P17096 107 aaKnown RBP-2.76□□□□□ -2.85
DEPDC4-205ENST00000548313 NREPQ16612 68 aa-2.76□□□□□ -2.85
DEPDC4-205ENST00000548313 KIAA0586Q9BVV6 1533 aa-2.77□□□□□ -2.85
DEPDC4-205ENST00000548313 PVALEFA0A1B0GWK0 134 aa-2.77□□□□□ -2.85
DEPDC4-205ENST00000548313 RPS29P62273 56 aaKnown RBP-2.77□□□□□ -2.85
DEPDC4-205ENST00000548313 MRPL33O75394 65 aaKnown RBP-2.78□□□□□ -2.85
DEPDC4-205ENST00000548313 WT1-ASQ06250 92 aa-2.78□□□□□ -2.85
DEPDC4-205ENST00000548313 ATP5EP2Q5VTU8 51 aa-2.78□□□□□ -2.85
DEPDC4-205ENST00000548313 ITSN2Q9NZM3 1697 aa-2.79□□□□□ -2.86
DEPDC4-205ENST00000548313 MT1FP04733 61 aa-2.79□□□□□ -2.86
DEPDC4-205ENST00000548313 SPART-AS1P0CW21 52 aa-2.79□□□□□ -2.86
DEPDC4-205ENST00000548313 V9GYS6 101 aa-2.79□□□□□ -2.86
DEPDC4-205ENST00000548313 RICTORQ6R327 1708 aa-2.79□□□□□ -2.86
DEPDC4-205ENST00000548313 TJP1Q07157 1748 aa-2.81□□□□□ -2.86
DEPDC4-205ENST00000548313 KANTRA0A1W2PQU2 76 aa-2.81□□□□□ -2.86
DEPDC4-205ENST00000548313 H3BUA1 57 aa-2.84□□□□□ -2.86
DEPDC4-205ENST00000548313 BVES-AS1Q5T3Y7 98 aa-2.84□□□□□ -2.86
DEPDC4-205ENST00000548313 RNF17Q9BXT8 1623 aaKnown RBP-2.84□□□□□ -2.86
DEPDC4-205ENST00000548313 MAST1Q9Y2H9 1570 aa-2.84□□□□□ -2.86
DEPDC4-205ENST00000548313 LY75O60449 1722 aa-2.85□□□□□ -2.86
DEPDC4-205ENST00000548313 TTC37Q6PGP7 1564 aa-2.85□□□□□ -2.87
DEPDC4-205ENST00000548313 A8MTW9 85 aa-2.85□□□□□ -2.87
DEPDC4-205ENST00000548313 M0QZ58 72 aa-2.86□□□□□ -2.87
DEPDC4-205ENST00000548313 HFM1A2PYH4 1435 aa-2.86□□□□□ -2.87
DEPDC4-205ENST00000548313 CFAP54Q96N23 3096 aa-2.87□□□□□ -2.87
DEPDC4-205ENST00000548313 CRYBG3Q68DQ2 2970 aa-2.87□□□□□ -2.87
DEPDC4-205ENST00000548313 M0QY20 66 aa-2.88□□□□□ -2.87
DEPDC4-205ENST00000548313 KIF1AQ12756 1690 aa-2.88□□□□□ -2.87
DEPDC4-205ENST00000548313 KCNQ1DNQ9H478 68 aa-2.89□□□□□ -2.87
DEPDC4-205ENST00000548313 ARHGAP35Q9NRY4 1499 aa-2.9□□□□□ -2.87
DEPDC4-205ENST00000548313 A0A087WXM4 84 aa-2.91□□□□□ -2.88
DEPDC4-205ENST00000548313 DEFB136Q30KP8 78 aa-2.91□□□□□ -2.88
DEPDC4-205ENST00000548313 NRAPQ86VF7 1730 aa-2.91□□□□□ -2.88
DEPDC4-205ENST00000548313 INO80Q9ULG1 1556 aaPredicted RBP-2.91□□□□□ -2.88
DEPDC4-205ENST00000548313 KDM5DQ9BY66 1539 aa-2.92□□□□□ -2.88
DEPDC4-205ENST00000548313 UBL5Q9BZL1 73 aa-2.92□□□□□ -2.88
DEPDC4-205ENST00000548313 SMARCA2P51531 1590 aa-2.92□□□□□ -2.88
DEPDC4-205ENST00000548313 UACAQ9BZF9 1416 aa-2.93□□□□□ -2.88
DEPDC4-205ENST00000548313 MYO15AQ9UKN7 3530 aa-2.93□□□□□ -2.88
DEPDC4-205ENST00000548313 DEFB121Q5J5C9 76 aa-2.93□□□□□ -2.88
DEPDC4-205ENST00000548313 RALGAPBQ86X10 1494 aa-2.93□□□□□ -2.88
DEPDC4-205ENST00000548313 SPEGQ15772 3267 aa-2.94□□□□□ -2.88
DEPDC4-205ENST00000548313 DMDP11532 3685 aa-2.95□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms