RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 COX8AP10176 69 aa7.95□□□□□ -1.14
VPS29-204ENST00000548259 J3KT08 172 aa7.94□□□□□ -1.14
VPS29-204ENST00000548259 DLEU1O43261 78 aa7.93□□□□□ -1.14
VPS29-204ENST00000548259 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
VPS29-204ENST00000548259 PRO1854Q9UHT4 67 aa7.93□□□□□ -1.14
VPS29-204ENST00000548259 NDUFB1O75438 58 aa7.92□□□□□ -1.14
VPS29-204ENST00000548259 HIST1H2BLQ99880 126 aa7.92□□□□□ -1.14
VPS29-204ENST00000548259 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
VPS29-204ENST00000548259 A6NJY4 79 aa7.91□□□□□ -1.14
VPS29-204ENST00000548259 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
VPS29-204ENST00000548259 VPS25Q9BRG1 176 aa7.91□□□□□ -1.14
VPS29-204ENST00000548259 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
VPS29-204ENST00000548259 A6NN06 94 aa7.89□□□□□ -1.15
VPS29-204ENST00000548259 HIST3H2BBQ8N257 126 aa7.89□□□□□ -1.15
VPS29-204ENST00000548259 HIGD1BQ9P298 99 aa7.88□□□□□ -1.15
VPS29-204ENST00000548259 TRIAP1O43715 76 aa7.87□□□□□ -1.15
VPS29-204ENST00000548259 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
VPS29-204ENST00000548259 UBE2V1Q13404 147 aa7.85□□□□□ -1.15
VPS29-204ENST00000548259 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
VPS29-204ENST00000548259 COX6CP09669 75 aa7.83□□□□□ -1.16
VPS29-204ENST00000548259 CEND1Q8N111 149 aa7.83□□□□□ -1.16
VPS29-204ENST00000548259 PSMB2P49721 201 aa7.82□□□□□ -1.16
VPS29-204ENST00000548259 RBM3P98179 157 aaKnown RBP7.82□□□□□ -1.16
VPS29-204ENST00000548259 C14orf144Q96I85 54 aa7.82□□□□□ -1.16
VPS29-204ENST00000548259 S100A6P06703 90 aa7.8□□□□□ -1.16
VPS29-204ENST00000548259 C8orf17Q9NRJ1 99 aa7.8□□□□□ -1.16
VPS29-204ENST00000548259 Q6ZVQ6 151 aa7.76□□□□□ -1.17
VPS29-204ENST00000548259 C9JAW5 83 aa7.75□□□□□ -1.17
VPS29-204ENST00000548259 Q5VV11 94 aa7.75□□□□□ -1.17
VPS29-204ENST00000548259 Q6ZQT0 140 aa7.75□□□□□ -1.17
VPS29-204ENST00000548259 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
VPS29-204ENST00000548259 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
VPS29-204ENST00000548259 C2orf91Q6ZV80 131 aa7.74□□□□□ -1.17
VPS29-204ENST00000548259 FXYD2P54710 66 aa7.73□□□□□ -1.17
VPS29-204ENST00000548259 SPATA45Q537H7 98 aa7.73□□□□□ -1.17
VPS29-204ENST00000548259 PAM16Q9Y3D7 125 aa7.73□□□□□ -1.17
VPS29-204ENST00000548259 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
VPS29-204ENST00000548259 S100A1P23297 94 aa7.69□□□□□ -1.18
VPS29-204ENST00000548259 VAMP8Q9BV40 100 aa7.69□□□□□ -1.18
VPS29-204ENST00000548259 A0A1B0GW54 56 aa7.67□□□□□ -1.18
VPS29-204ENST00000548259 MRPL34Q9BQ48 92 aaKnown RBP7.66□□□□□ -1.18
VPS29-204ENST00000548259 IGKV2D-30A0A075B6S6 120 aa7.65□□□□□ -1.18
VPS29-204ENST00000548259 NDUFS5O43920 106 aa7.65□□□□□ -1.18
VPS29-204ENST00000548259 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
VPS29-204ENST00000548259 MT1BP07438 61 aa7.65□□□□□ -1.18
VPS29-204ENST00000548259 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.18
VPS29-204ENST00000548259 SCGB1C2P0DMR2 95 aa7.64□□□□□ -1.19
VPS29-204ENST00000548259 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
VPS29-204ENST00000548259 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
VPS29-204ENST00000548259 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
VPS29-204ENST00000548259 K7ERJ3 54 aa7.63□□□□□ -1.19
VPS29-204ENST00000548259 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
VPS29-204ENST00000548259 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
VPS29-204ENST00000548259 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
VPS29-204ENST00000548259 BAALC-AS2P0C853 105 aa7.62□□□□□ -1.19
VPS29-204ENST00000548259 KMT2DO14686 5537 aa7.62□□□□□ -1.19
VPS29-204ENST00000548259 HSD52Q0P140 79 aa7.61□□□□□ -1.19
VPS29-204ENST00000548259 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
VPS29-204ENST00000548259 C5orf47Q569G3 176 aa7.6□□□□□ -1.19
VPS29-204ENST00000548259 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.19
VPS29-204ENST00000548259 hDV103S1A0JD37 113 aa7.58□□□□□ -1.2
VPS29-204ENST00000548259 JMJD7-PLA2G4BH0Y9G9 81 aa7.58□□□□□ -1.2
VPS29-204ENST00000548259 PDE6GP18545 87 aa7.58□□□□□ -1.2
VPS29-204ENST00000548259 MMP24-AS1A0A0U1RRL7 71 aa7.57□□□□□ -1.2
VPS29-204ENST00000548259 NREPQ16612 68 aa7.56□□□□□ -1.2
VPS29-204ENST00000548259 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
VPS29-204ENST00000548259 LOC110117498A0A087WWA1 95 aa7.54□□□□□ -1.2
VPS29-204ENST00000548259 C4orf26Q17RF5 130 aa7.54□□□□□ -1.2
VPS29-204ENST00000548259 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
VPS29-204ENST00000548259 S4R3F8 94 aa7.49□□□□□ -1.21
VPS29-204ENST00000548259 K7EQZ3 153 aa7.46□□□□□ -1.22
VPS29-204ENST00000548259 ATXN8Q156A1 80 aa7.46□□□□□ -1.22
VPS29-204ENST00000548259 Q5W150 140 aa7.46□□□□□ -1.22
VPS29-204ENST00000548259 KLKP1Q107X0 134 aa7.45□□□□□ -1.22
VPS29-204ENST00000548259 C14orf132Q9NPU4 83 aa7.43□□□□□ -1.22
VPS29-204ENST00000548259 SPRR2EP22531 72 aa7.41□□□□□ -1.22
VPS29-204ENST00000548259 SPRR2BP35325 72 aa7.41□□□□□ -1.22
VPS29-204ENST00000548259 SPRR2AP35326 72 aa7.41□□□□□ -1.22
VPS29-204ENST00000548259 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
VPS29-204ENST00000548259 HCG22E2RYF7 251 aa7.38□□□□□ -1.23
VPS29-204ENST00000548259 CXCL6P80162 114 aa7.38□□□□□ -1.23
VPS29-204ENST00000548259 LCA10Q71F78 164 aa7.38□□□□□ -1.23
VPS29-204ENST00000548259 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
VPS29-204ENST00000548259 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
VPS29-204ENST00000548259 BPY2O14599 106 aa7.37□□□□□ -1.23
VPS29-204ENST00000548259 CASC2Q6XLA1 102 aa7.37□□□□□ -1.23
VPS29-204ENST00000548259 C1orf64Q8NEQ6 169 aa7.36□□□□□ -1.23
VPS29-204ENST00000548259 UQCR10Q9UDW1 63 aa7.36□□□□□ -1.23
VPS29-204ENST00000548259 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
VPS29-204ENST00000548259 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
VPS29-204ENST00000548259 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
VPS29-204ENST00000548259 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
VPS29-204ENST00000548259 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
VPS29-204ENST00000548259 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
VPS29-204ENST00000548259 Q8N9L7 120 aa7.24□□□□□ -1.25
VPS29-204ENST00000548259 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
VPS29-204ENST00000548259 NAA38Q9BRA0 125 aaKnown RBP7.22□□□□□ -1.25
VPS29-204ENST00000548259 M0R143 59 aa7.19□□□□□ -1.26
VPS29-204ENST00000548259 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
VPS29-204ENST00000548259 SPRR2DP22532 72 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms