RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DSCR10P59022 87 aa12.56□□□□□ -0.4
SMARCD1-203ENST00000547247 A0A1B0GVX0 72 aa12.56□□□□□ -0.4
SMARCD1-203ENST00000547247 LINC00313P59037 77 aa12.56□□□□□ -0.4
SMARCD1-203ENST00000547247 UBL5Q9BZL1 73 aa12.55□□□□□ -0.4
SMARCD1-203ENST00000547247 A8MWP4 228 aa12.54□□□□□ -0.4
SMARCD1-203ENST00000547247 SEC61BP60468 96 aaKnown RBP12.53□□□□□ -0.4
SMARCD1-203ENST00000547247 MUC17Q685J3 4493 aa12.53□□□□□ -0.4
SMARCD1-203ENST00000547247 BPY2O14599 106 aa12.51□□□□□ -0.41
SMARCD1-203ENST00000547247 C8orf87E5RJ46 101 aa12.5□□□□□ -0.41
SMARCD1-203ENST00000547247 NOTCH2NLQ7Z3S9 236 aa12.5□□□□□ -0.41
SMARCD1-203ENST00000547247 RPL37P61927 97 aaKnown RBP12.49□□□□□ -0.41
SMARCD1-203ENST00000547247 IGKV3D-7A0A0C4DH55 119 aa12.48□□□□□ -0.41
SMARCD1-203ENST00000547247 Q75L30 129 aa12.46□□□□□ -0.42
SMARCD1-203ENST00000547247 PRR15Q8IV56 129 aa12.46□□□□□ -0.42
SMARCD1-203ENST00000547247 ACYP1P07311 99 aa12.45□□□□□ -0.42
SMARCD1-203ENST00000547247 C20orf166-AS1Q96NR2 134 aa12.43□□□□□ -0.42
SMARCD1-203ENST00000547247 FAM240AA0A1B0GVK7 77 aa12.43□□□□□ -0.42
SMARCD1-203ENST00000547247 KRTAP16-1A8MUX0 517 aa12.43□□□□□ -0.42
SMARCD1-203ENST00000547247 A8MUU9 505 aa12.41□□□□□ -0.42
SMARCD1-203ENST00000547247 K7EQZ3 153 aa12.41□□□□□ -0.42
SMARCD1-203ENST00000547247 PCOTHQ58A44 107 aa12.41□□□□□ -0.42
SMARCD1-203ENST00000547247 C8orf17Q9NRJ1 99 aa12.41□□□□□ -0.42
SMARCD1-203ENST00000547247 MUC2Q02817 5179 aa12.41□□□□□ -0.42
SMARCD1-203ENST00000547247 ATP11AUNQ6ZP68 121 aa12.35□□□□□ -0.43
SMARCD1-203ENST00000547247 Q8N9L7 120 aa12.34□□□□□ -0.43
SMARCD1-203ENST00000547247 MMP24-AS1A0A0U1RRL7 71 aa12.31□□□□□ -0.44
SMARCD1-203ENST00000547247 J3QR89 54 aa12.3□□□□□ -0.44
SMARCD1-203ENST00000547247 CXCL6P80162 114 aa12.3□□□□□ -0.44
SMARCD1-203ENST00000547247 KRTAP4-1Q9BYQ7 146 aa12.27□□□□□ -0.44
SMARCD1-203ENST00000547247 hDV103S1A0JD37 113 aa12.26□□□□□ -0.45
SMARCD1-203ENST00000547247 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
SMARCD1-203ENST00000547247 TMEM254Q8TBM7 123 aa12.26□□□□□ -0.45
SMARCD1-203ENST00000547247 MRPL34Q9BQ48 92 aaKnown RBP12.24□□□□□ -0.45
SMARCD1-203ENST00000547247 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
SMARCD1-203ENST00000547247 CASC2Q6XLA1 102 aa12.2□□□□□ -0.46
SMARCD1-203ENST00000547247 WFDC13Q8IUB5 93 aa12.2□□□□□ -0.46
SMARCD1-203ENST00000547247 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
SMARCD1-203ENST00000547247 LINC00643Q86TS7 51 aa12.18□□□□□ -0.46
SMARCD1-203ENST00000547247 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
SMARCD1-203ENST00000547247 NDUFS5O43920 106 aa12.13□□□□□ -0.47
SMARCD1-203ENST00000547247 ZCCHC13Q8WW36 166 aaKnown RBP12.13□□□□□ -0.47
SMARCD1-203ENST00000547247 K7ERU9 68 aa12.1□□□□□ -0.47
SMARCD1-203ENST00000547247 HIST1H4AP62805 103 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-203ENST00000547247 FAT4Q6V0I7 4981 aa12.05□□□□□ -0.48
SMARCD1-203ENST00000547247 A0A087WVE0 104 aa11.94□□□□□ -0.5
SMARCD1-203ENST00000547247 Q5W150 140 aa11.93□□□□□ -0.5
SMARCD1-203ENST00000547247 SPINK7P58062 85 aa11.92□□□□□ -0.5
SMARCD1-203ENST00000547247 TP53AIP1Q9HCN2 124 aa11.92□□□□□ -0.5
SMARCD1-203ENST00000547247 KRTAP19-2Q3LHN2 52 aa11.9□□□□□ -0.5
SMARCD1-203ENST00000547247 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
SMARCD1-203ENST00000547247 HRES1P13985 223 aa11.84□□□□□ -0.51
SMARCD1-203ENST00000547247 COX6B2Q6YFQ2 88 aa11.84□□□□□ -0.51
SMARCD1-203ENST00000547247 LCE2CQ5TA81 110 aa11.84□□□□□ -0.51
SMARCD1-203ENST00000547247 MT-ATP8P03928 68 aa11.8□□□□□ -0.52
SMARCD1-203ENST00000547247 IMUPQ9GZP8 106 aa11.8□□□□□ -0.52
SMARCD1-203ENST00000547247 IGKV2D-30A0A075B6S6 120 aa11.79□□□□□ -0.52
SMARCD1-203ENST00000547247 IGKV2-30P06310 120 aa11.79□□□□□ -0.52
SMARCD1-203ENST00000547247 C7orf65Q6ZTY9 151 aa11.78□□□□□ -0.52
SMARCD1-203ENST00000547247 MPLKIPQ8TAP9 179 aa11.78□□□□□ -0.52
SMARCD1-203ENST00000547247 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
SMARCD1-203ENST00000547247 UQCRQO14949 82 aa11.73□□□□□ -0.53
SMARCD1-203ENST00000547247 TRAV22A0A0B4J277 110 aa11.71□□□□□ -0.53
SMARCD1-203ENST00000547247 FAM236DA0A1B0GTK5 79 aa11.71□□□□□ -0.53
SMARCD1-203ENST00000547247 FAM236CP0DP71 79 aa11.71□□□□□ -0.53
SMARCD1-203ENST00000547247 SCGB1A1P11684 91 aa11.67□□□□□ -0.54
SMARCD1-203ENST00000547247 MT1HP80294 61 aa11.67□□□□□ -0.54
SMARCD1-203ENST00000547247 OCR1Q9BZK8 76 aa11.67□□□□□ -0.54
SMARCD1-203ENST00000547247 H0Y9P7 68 aa11.62□□□□□ -0.55
SMARCD1-203ENST00000547247 ATOX1O00244 68 aa11.61□□□□□ -0.55
SMARCD1-203ENST00000547247 FLGP20930 4061 aaPredicted RBP11.6□□□□□ -0.55
SMARCD1-203ENST00000547247 LOC101927531A0A1B0GV80 90 aa11.59□□□□□ -0.55
SMARCD1-203ENST00000547247 FAM236AA0A1B0GUQ0 79 aa11.57□□□□□ -0.56
SMARCD1-203ENST00000547247 FAM236BA0A1B0GV22 79 aa11.57□□□□□ -0.56
SMARCD1-203ENST00000547247 CYP4F30PQ9H0H9 118 aa11.57□□□□□ -0.56
SMARCD1-203ENST00000547247 M0R2T5 61 aa11.53□□□□□ -0.56
SMARCD1-203ENST00000547247 MP68P56378 58 aa11.53□□□□□ -0.56
SMARCD1-203ENST00000547247 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
SMARCD1-203ENST00000547247 C5orf47Q569G3 176 aa11.53□□□□□ -0.56
SMARCD1-203ENST00000547247 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
SMARCD1-203ENST00000547247 LINC00208Q96KT6 92 aa11.5□□□□□ -0.57
SMARCD1-203ENST00000547247 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
SMARCD1-203ENST00000547247 H1FX-AS1Q4G0G2 97 aa11.44□□□□□ -0.58
SMARCD1-203ENST00000547247 H3BPC8 53 aa11.43□□□□□ -0.58
SMARCD1-203ENST00000547247 TRAV7A0A075B6U4 112 aa11.42□□□□□ -0.58
SMARCD1-203ENST00000547247 KRTAP10-6P60371 365 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-203ENST00000547247 KRTAP3-1Q9BYR8 98 aa11.35□□□□□ -0.59
SMARCD1-203ENST00000547247 LORP23490 312 aaPredicted RBP11.33□□□□□ -0.6
SMARCD1-203ENST00000547247 KLKP1Q107X0 134 aa11.32□□□□□ -0.6
SMARCD1-203ENST00000547247 KRTAP9-2Q9BYQ4 174 aa11.32□□□□□ -0.6
SMARCD1-203ENST00000547247 SERP2Q8N6R1 65 aa11.25□□□□□ -0.61
SMARCD1-203ENST00000547247 S4R3F8 94 aa11.18□□□□□ -0.62
SMARCD1-203ENST00000547247 A8MUN3 132 aa11.16□□□□□ -0.62
SMARCD1-203ENST00000547247 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
SMARCD1-203ENST00000547247 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
SMARCD1-203ENST00000547247 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
SMARCD1-203ENST00000547247 KRTAP9-8Q9BYQ0 159 aa11.12□□□□□ -0.63
SMARCD1-203ENST00000547247 LCA10Q71F78 164 aa11.11□□□□□ -0.63
SMARCD1-203ENST00000547247 COX7CP15954 63 aa11.07□□□□□ -0.64
SMARCD1-203ENST00000547247 CSAG1Q6PB30 78 aa11.03□□□□□ -0.64
SMARCD1-203ENST00000547247 DMAC1Q96GE9 116 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms