RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	CXCL6	P80162	114 aa		4.01	□□□□□ -1.77
LDHA-223	ENST00000545215	KLKP1	Q107X0	134 aa		4.01	□□□□□ -1.77
LDHA-223	ENST00000545215	SMCR5	Q8TEV8	140 aa		4.01	□□□□□ -1.77
LDHA-223	ENST00000545215	TRAV7	A0A075B6U4	112 aa		4	□□□□□ -1.77
LDHA-223	ENST00000545215		H7BZZ5	65 aa		4	□□□□□ -1.77
LDHA-223	ENST00000545215	C9orf129	Q5T035	196 aa	Known RBP	4	□□□□□ -1.77
LDHA-223	ENST00000545215	NKAPP1	Q8N9T2	125 aa		4	□□□□□ -1.77
LDHA-223	ENST00000545215	LINC00308	Q8TCZ7	52 aa		4	□□□□□ -1.77
LDHA-223	ENST00000545215	XAGE1A	Q9HD64	81 aa		4	□□□□□ -1.77
LDHA-223	ENST00000545215	TRAV13-2	A0A0B4J235	113 aa		3.99	□□□□□ -1.77
LDHA-223	ENST00000545215	TRBV10-3	A0A0K0K1G6	114 aa		3.99	□□□□□ -1.77
LDHA-223	ENST00000545215	UBE2B	P63146	152 aa		3.99	□□□□□ -1.77
LDHA-223	ENST00000545215	KRTAP4-1	Q9BYQ7	146 aa		3.99	□□□□□ -1.77
LDHA-223	ENST00000545215	RBM12B-AS1	Q9P1G2	102 aa		3.99	□□□□□ -1.77
LDHA-223	ENST00000545215	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.98	□□□□□ -1.77
LDHA-223	ENST00000545215		M0R378	163 aa		3.98	□□□□□ -1.77
LDHA-223	ENST00000545215	PRR3	P79522	188 aa	Known RBP	3.98	□□□□□ -1.77
LDHA-223	ENST00000545215	C20orf197	Q8N268	126 aa		3.98	□□□□□ -1.77
LDHA-223	ENST00000545215		A0A1W2PNN7	141 aa		3.97	□□□□□ -1.77
LDHA-223	ENST00000545215	C22orf24	Q9Y442	160 aa		3.97	□□□□□ -1.77
LDHA-223	ENST00000545215		H7C2G1	150 aa		3.96	□□□□□ -1.77
LDHA-223	ENST00000545215	KRTAP2-3	P0C7H8	128 aa		3.96	□□□□□ -1.77
LDHA-223	ENST00000545215	MUSTN1	Q8IVN3	82 aa		3.96	□□□□□ -1.77
LDHA-223	ENST00000545215	KRTAP2-4	Q9BYR9	128 aa		3.96	□□□□□ -1.77
LDHA-223	ENST00000545215	FAM168B	A1KXE4	195 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	KRTAP19-2	Q3LHN2	52 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	SOSTDC1	Q6X4U4	206 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	MUC12	Q9UKN1	5478 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	GPR98	Q8WXG9	6306 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	IGLV8-61	A0A075B6I0	122 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	IGLV1-50	A0A075B6I6	118 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215		F8WEM9	126 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	MT3	P25713	68 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	LINC00167	Q96N53	147 aa		3.95	□□□□□ -1.78
LDHA-223	ENST00000545215	NCR3	O14931	201 aa		3.94	□□□□□ -1.78
LDHA-223	ENST00000545215	ERC2-IT1	O76042	136 aa		3.94	□□□□□ -1.78
LDHA-223	ENST00000545215	IGLV6-57	P01721	117 aa		3.94	□□□□□ -1.78
LDHA-223	ENST00000545215		Q1T7F1	81 aa		3.94	□□□□□ -1.78
LDHA-223	ENST00000545215	PHF5A	Q7RTV0	110 aa	Known RBP	3.94	□□□□□ -1.78
LDHA-223	ENST00000545215	KCNQ1DN	Q9H478	68 aa		3.94	□□□□□ -1.78
LDHA-223	ENST00000545215	IGKV2-28	A0A075B6P5	120 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	C8orf87	E5RJ46	101 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	TMEM256-PLSCR3	K7ERE1	68 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	ZNF73	O43830	326 aa	Predicted RBP	3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	IGKV2D-28	P01615	120 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	LINC00337	Q8N6G1	96 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215		Q8NDZ9	215 aa		3.93	□□□□□ -1.78
LDHA-223	ENST00000545215	TRAV23DV6	A0A075B6W5	121 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	IGKV3D-7	A0A0C4DH55	119 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215		H0Y9J4	135 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	BAALC-AS2	P0C853	105 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	RPL28	P46779	137 aa	Known RBP	3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	LCA10	Q71F78	164 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	CLEC2B	Q92478	149 aa		3.92	□□□□□ -1.78
LDHA-223	ENST00000545215	KMT2D	O14686	5537 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215	ETDC	A0A1B0GVM5	59 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215	SPRR1A	P35321	89 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215	UBE2A	P49459	152 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215	TPRXL	Q17RH7	258 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215	DIRC1	Q969H9	104 aa		3.91	□□□□□ -1.78
LDHA-223	ENST00000545215		A0A087WVE0	104 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	IGLV7-43	P04211	117 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	ASB16-AS1	Q495Z4	193 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	C1orf137	Q5JT78	98 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	C7orf65	Q6ZTY9	151 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	LINC00846	Q9NV44	126 aa		3.9	□□□□□ -1.79
LDHA-223	ENST00000545215	ZNF861P	O60384	105 aa		3.89	□□□□□ -1.79
LDHA-223	ENST00000545215	KRTAP1-4	P0C5Y4	121 aa		3.89	□□□□□ -1.79
LDHA-223	ENST00000545215	UBL5	Q9BZL1	73 aa		3.89	□□□□□ -1.79
LDHA-223	ENST00000545215		H0YGX0	51 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215		M0R2T5	61 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	C6orf99	Q4VX62	202 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	ATP11AUN	Q6ZP68	121 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215		Q6ZRX8	168 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	TYMSOS	Q8TAI1	123 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	SMIM11B	Q8TCY0	68 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	OBSCN-AS1	Q96MR7	158 aa		3.88	□□□□□ -1.79
LDHA-223	ENST00000545215	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.87	□□□□□ -1.79
LDHA-223	ENST00000545215	COX7B	P24311	80 aa		3.87	□□□□□ -1.79
LDHA-223	ENST00000545215	ELOF1	P60002	83 aa	Known RBP	3.87	□□□□□ -1.79
LDHA-223	ENST00000545215	KRTAP13-1	Q8IUC0	172 aa		3.87	□□□□□ -1.79
LDHA-223	ENST00000545215	KRTAP11-1	Q8IUC1	163 aa		3.87	□□□□□ -1.79
LDHA-223	ENST00000545215	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.87	□□□□□ -1.79
LDHA-223	ENST00000545215		A8MUN3	132 aa		3.85	□□□□□ -1.79
LDHA-223	ENST00000545215	CYP4F30P	Q9H0H9	118 aa		3.85	□□□□□ -1.79
LDHA-223	ENST00000545215	TRBV7-4	A0A0J9YYF1	115 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215		H3BQ85	93 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215	PRLH	P81277	87 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215	TMEM254	Q8TBM7	123 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215	HIGD2A	Q9BW72	106 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215	SNURF	Q9Y675	71 aa		3.84	□□□□□ -1.79
LDHA-223	ENST00000545215	hDV103S1	A0JD37	113 aa		3.83	□□□□□ -1.8
LDHA-223	ENST00000545215	KRTAP19-6	Q3LI70	58 aa		3.83	□□□□□ -1.8
LDHA-223	ENST00000545215	FAM229B	Q4G0N7	80 aa		3.83	□□□□□ -1.8
LDHA-223	ENST00000545215	LINC00575	Q6W349	94 aa		3.83	□□□□□ -1.8
LDHA-223	ENST00000545215	C14orf132	Q9NPU4	83 aa		3.83	□□□□□ -1.8
LDHA-223	ENST00000545215	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.82	□□□□□ -1.8
LDHA-223	ENST00000545215		Q9BRP9	147 aa		3.82	□□□□□ -1.8
LDHA-223	ENST00000545215	MP68	P56378	58 aa		3.81	□□□□□ -1.8
LDHA-223	ENST00000545215	NREP	Q16612	68 aa		3.81	□□□□□ -1.8

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