RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 C21orf62-AS1Q17RA5 79 aa8.2□□□□□ -1.1
DDX55-212ENST00000544738 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
DDX55-212ENST00000544738 VPS25Q9BRG1 176 aa8.2□□□□□ -1.1
DDX55-212ENST00000544738 TMA7Q9Y2S6 64 aaKnown RBP8.18□□□□□ -1.1
DDX55-212ENST00000544738 C8orf87E5RJ46 101 aa8.17□□□□□ -1.1
DDX55-212ENST00000544738 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 C9JAW5 83 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 BAALC-AS2P0C853 105 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
DDX55-212ENST00000544738 J3KT08 172 aa8.15□□□□□ -1.1
DDX55-212ENST00000544738 MT2AP02795 61 aa8.15□□□□□ -1.1
DDX55-212ENST00000544738 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
DDX55-212ENST00000544738 MPLKIPQ8TAP9 179 aa8.12□□□□□ -1.11
DDX55-212ENST00000544738 HRES1P13985 223 aa8.11□□□□□ -1.11
DDX55-212ENST00000544738 Q6ZQT0 140 aa8.1□□□□□ -1.11
DDX55-212ENST00000544738 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
DDX55-212ENST00000544738 JMJD7-PLA2G4BH0Y9G9 81 aa8.09□□□□□ -1.11
DDX55-212ENST00000544738 M0R143 59 aa8.09□□□□□ -1.11
DDX55-212ENST00000544738 NDUFB1O75438 58 aa8.09□□□□□ -1.11
DDX55-212ENST00000544738 MT1FP04733 61 aa8.09□□□□□ -1.11
DDX55-212ENST00000544738 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
DDX55-212ENST00000544738 A0A1B0GW54 56 aa8.08□□□□□ -1.12
DDX55-212ENST00000544738 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
DDX55-212ENST00000544738 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
DDX55-212ENST00000544738 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
DDX55-212ENST00000544738 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
DDX55-212ENST00000544738 PDE6GP18545 87 aa8.05□□□□□ -1.12
DDX55-212ENST00000544738 LOC110117498A0A087WWA1 95 aa8.04□□□□□ -1.12
DDX55-212ENST00000544738 Q8N9P0 234 aaPredicted RBP8.02□□□□□ -1.13
DDX55-212ENST00000544738 NAA38Q9BRA0 125 aaKnown RBP8.02□□□□□ -1.13
DDX55-212ENST00000544738 KRTAP19-6Q3LI70 58 aa8.01□□□□□ -1.13
DDX55-212ENST00000544738 A8MWP4 228 aa8□□□□□ -1.13
DDX55-212ENST00000544738 SPINK7P58062 85 aa8□□□□□ -1.13
DDX55-212ENST00000544738 NEBP20929 6669 aa8□□□□□ -1.13
DDX55-212ENST00000544738 LYRM7Q5U5X0 104 aa7.99□□□□□ -1.13
DDX55-212ENST00000544738 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
DDX55-212ENST00000544738 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.14
DDX55-212ENST00000544738 IGKV3D-7A0A0C4DH55 119 aa7.95□□□□□ -1.14
DDX55-212ENST00000544738 SMIM6P0DI80 62 aa7.94□□□□□ -1.14
DDX55-212ENST00000544738 NREPQ16612 68 aa7.94□□□□□ -1.14
DDX55-212ENST00000544738 Q6ZVQ6 151 aa7.94□□□□□ -1.14
DDX55-212ENST00000544738 PRR15Q8IV56 129 aa7.92□□□□□ -1.14
DDX55-212ENST00000544738 TSTD3H0UI37 97 aa7.89□□□□□ -1.15
DDX55-212ENST00000544738 WFDC13Q8IUB5 93 aa7.88□□□□□ -1.15
DDX55-212ENST00000544738 BATFQ16520 125 aa7.87□□□□□ -1.15
DDX55-212ENST00000544738 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
DDX55-212ENST00000544738 TMEM254Q8TBM7 123 aa7.86□□□□□ -1.15
DDX55-212ENST00000544738 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
DDX55-212ENST00000544738 MMP24-AS1A0A0U1RRL7 71 aa7.84□□□□□ -1.15
DDX55-212ENST00000544738 H3BT86 120 aa7.84□□□□□ -1.15
DDX55-212ENST00000544738 KRTAP20-1Q3LI63 56 aa7.83□□□□□ -1.16
DDX55-212ENST00000544738 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
DDX55-212ENST00000544738 C9orf118A6NHY6 69 aa7.81□□□□□ -1.16
DDX55-212ENST00000544738 K7EQZ3 153 aa7.8□□□□□ -1.16
DDX55-212ENST00000544738 NDUFS5O43920 106 aa7.79□□□□□ -1.16
DDX55-212ENST00000544738 A0A1W2PPM0 123 aa7.78□□□□□ -1.16
DDX55-212ENST00000544738 BPY2O14599 106 aa7.78□□□□□ -1.16
DDX55-212ENST00000544738 TAX1BP3O14907 124 aa7.76□□□□□ -1.17
DDX55-212ENST00000544738 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
DDX55-212ENST00000544738 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
DDX55-212ENST00000544738 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
DDX55-212ENST00000544738 C7orf65Q6ZTY9 151 aa7.7□□□□□ -1.18
DDX55-212ENST00000544738 Q5W150 140 aa7.68□□□□□ -1.18
DDX55-212ENST00000544738 CASC2Q6XLA1 102 aa7.68□□□□□ -1.18
DDX55-212ENST00000544738 SPCS1Q9Y6A9 102 aa7.66□□□□□ -1.18
DDX55-212ENST00000544738 LOC105371267A0A1B0GV96 52 aa7.65□□□□□ -1.18
DDX55-212ENST00000544738 Q8N9L7 120 aa7.65□□□□□ -1.18
DDX55-212ENST00000544738 HCG22E2RYF7 251 aa7.64□□□□□ -1.19
DDX55-212ENST00000544738 CXCL6P80162 114 aa7.63□□□□□ -1.19
DDX55-212ENST00000544738 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
DDX55-212ENST00000544738 UBL5Q9BZL1 73 aa7.61□□□□□ -1.19
DDX55-212ENST00000544738 MDN1Q9NU22 5596 aa7.57□□□□□ -1.2
DDX55-212ENST00000544738 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
DDX55-212ENST00000544738 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
DDX55-212ENST00000544738 PRO0461Q9UI25 63 aa7.53□□□□□ -1.2
DDX55-212ENST00000544738 K7EP34 96 aa7.51□□□□□ -1.21
DDX55-212ENST00000544738 KMT2DO14686 5537 aa7.5□□□□□ -1.21
DDX55-212ENST00000544738 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
DDX55-212ENST00000544738 A6NN06 94 aa7.46□□□□□ -1.22
DDX55-212ENST00000544738 C5orf47Q569G3 176 aa7.46□□□□□ -1.22
DDX55-212ENST00000544738 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
DDX55-212ENST00000544738 GTF2H5Q6ZYL4 71 aa7.44□□□□□ -1.22
DDX55-212ENST00000544738 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
DDX55-212ENST00000544738 S4R3F8 94 aa7.44□□□□□ -1.22
DDX55-212ENST00000544738 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
DDX55-212ENST00000544738 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
DDX55-212ENST00000544738 FAM236AA0A1B0GUQ0 79 aa7.42□□□□□ -1.22
DDX55-212ENST00000544738 FAM236BA0A1B0GV22 79 aa7.42□□□□□ -1.22
DDX55-212ENST00000544738 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
DDX55-212ENST00000544738 F8W1H4 67 aa7.41□□□□□ -1.22
DDX55-212ENST00000544738 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
DDX55-212ENST00000544738 ETDBQ3ZM63 59 aa7.37□□□□□ -1.23
DDX55-212ENST00000544738 LCA10Q71F78 164 aa7.36□□□□□ -1.23
DDX55-212ENST00000544738 CYP4F30PQ9H0H9 118 aa7.3□□□□□ -1.24
DDX55-212ENST00000544738 Q5VV11 94 aa7.29□□□□□ -1.24
DDX55-212ENST00000544738 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
DDX55-212ENST00000544738 TRAV22A0A0B4J277 110 aa7.27□□□□□ -1.25
DDX55-212ENST00000544738 LOC101927531A0A1B0GV80 90 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms