RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
SCFD1-207ENST00000544052 TMEM191AQ9H0A3 160 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 C20orf202A1L168 122 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 C7orf77A4D0Y5 90 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 HIGD1CA8MV81 97 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 MIR22HGQ0VDD5 57 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 C5orf38Q86SI9 138 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 C6orf48Q9UBA6 75 aa1.45□□□□□ -2.18
SCFD1-207ENST00000544052 TRBV20-1A0A075B6N2 111 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 TRAV12-1A0A0B4J245 112 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 SPAG11BQ08648 103 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 Q1T7F1 81 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 UNQ6190/PRO20217Q6UXQ8 127 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 COA5Q86WW8 74 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 TMEM254Q8TBM7 123 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 TSKUQ8WUA8 353 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 ST20Q9HBF5 79 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 A0A1B0GUT8 65 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 SMIM27A0A1W2PRY6 76 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 SMIM6P0DI80 62 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 C1orf137Q5JT78 98 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 C2orf82Q6UX34 121 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 SMIM7Q9BQ49 75 aa1.44□□□□□ -2.18
SCFD1-207ENST00000544052 SMIM2Q9BVW6 85 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 MRPL35Q9NZE8 188 aaKnown RBP1.43□□□□□ -2.18
SCFD1-207ENST00000544052 FSIP2Q5CZC0 6907 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 D6R8Y8 96 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 ERC2-IT1O76042 136 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 MRPL54Q6P161 138 aaKnown RBP1.43□□□□□ -2.18
SCFD1-207ENST00000544052 TEX261Q6UWH6 196 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 LINC00474Q9P2X8 69 aa1.43□□□□□ -2.18
SCFD1-207ENST00000544052 A0A087WSZ3 146 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 UBE2D1P51668 147 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 ADIRFQ15847 76 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
SCFD1-207ENST00000544052 AMELXQ99217 191 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 C20orf78Q9BR46 151 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
SCFD1-207ENST00000544052 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 NDUFA1O15239 70 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 FCER1GP30273 86 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 CASC2Q6XLA1 102 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 ADCYAP1P18509 176 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 C22orf24Q9Y442 160 aa1.41□□□□□ -2.18
SCFD1-207ENST00000544052 TRBV30A0A0K0K1B3 111 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 IGKCP01834 107 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 ATP11AUNQ6ZP68 121 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 TMEM141Q96I45 108 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 CDKN2A-AS1Q9UH64 79 aa1.4□□□□□ -2.19
SCFD1-207ENST00000544052 IFI27P40305 119 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-207ENST00000544052 Q8IZM0 81 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 ATOH7Q8N100 152 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 Q8N8P6 123 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 LIMD2Q9BT23 127 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 TOMM7Q9P0U1 55 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 PPP1R17O96001 155 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 KRTAP19-2Q3LHN2 52 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 LINC01545Q5VT33 79 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
SCFD1-207ENST00000544052 LINC01546A6NGU7 62 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 BCE1O60756 84 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 SPINK8P0C7L1 97 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 PRLHP81277 87 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 DSCR8Q96T75 97 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-207ENST00000544052 TMEM218A2RU14 115 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 F8VRH5 84 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 F8W1H4 67 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 NUPR1O60356 82 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 PEA15Q15121 130 aa1.38□□□□□ -2.19
SCFD1-207ENST00000544052 USH2AO75445 5202 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 S100A8P05109 93 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 HSD52Q0P140 79 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 GTF2H5Q6ZYL4 71 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 COX7B2Q8TF08 81 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 NDUFA12Q9UI09 145 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
SCFD1-207ENST00000544052 IGLC3P0DOY3 106 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 PMCHL1Q16048 86 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 C9orf153Q5TBE3 101 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 SERP1Q9Y6X1 66 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 K7EMI3 77 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 RBM3P98179 157 aaKnown RBP1.36□□□□□ -2.19
SCFD1-207ENST00000544052 SPRR4Q96PI1 79 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 NXT2Q9NPJ8 142 aaKnown RBP1.36□□□□□ -2.19
SCFD1-207ENST00000544052 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
SCFD1-207ENST00000544052 SNCGO76070 127 aa1.35□□□□□ -2.19
SCFD1-207ENST00000544052 SPRR1AP35321 89 aa1.35□□□□□ -2.19
SCFD1-207ENST00000544052 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.35□□□□□ -2.19
SCFD1-207ENST00000544052 C18orf32Q8TCD1 76 aa1.35□□□□□ -2.19
SCFD1-207ENST00000544052 M0R143 59 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 COX7CP15954 63 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 SEC11AP67812 179 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 MT1HP80294 61 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 SNHG12Q9BXW3 62 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 ORMDL1Q9P0S3 153 aa1.34□□□□□ -2.19
SCFD1-207ENST00000544052 TRBV10-3A0A0K0K1G6 114 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms