RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
SP140-213ENST00000543928 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
SP140-213ENST00000543928 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
SP140-213ENST00000543928 A0A1B0GW54 56 aa7.5□□□□□ -1.21
SP140-213ENST00000543928 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
SP140-213ENST00000543928 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
SP140-213ENST00000543928 SIGMAR1Q99720 223 aa7.48□□□□□ -1.21
SP140-213ENST00000543928 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
SP140-213ENST00000543928 A0A1B0GV90 55 aa7.47□□□□□ -1.21
SP140-213ENST00000543928 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
SP140-213ENST00000543928 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.21
SP140-213ENST00000543928 ETDBQ3ZM63 59 aa7.45□□□□□ -1.22
SP140-213ENST00000543928 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
SP140-213ENST00000543928 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
SP140-213ENST00000543928 J3KT08 172 aa7.41□□□□□ -1.22
SP140-213ENST00000543928 NREPQ16612 68 aa7.41□□□□□ -1.22
SP140-213ENST00000543928 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
SP140-213ENST00000543928 DSCR10P59022 87 aa7.38□□□□□ -1.23
SP140-213ENST00000543928 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
SP140-213ENST00000543928 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
SP140-213ENST00000543928 A0A1B0GVX0 72 aa7.36□□□□□ -1.23
SP140-213ENST00000543928 LINC00313P59037 77 aa7.35□□□□□ -1.23
SP140-213ENST00000543928 Q6ZVQ6 151 aa7.35□□□□□ -1.23
SP140-213ENST00000543928 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
SP140-213ENST00000543928 A8MWP4 228 aa7.34□□□□□ -1.23
SP140-213ENST00000543928 NDUFB1O75438 58 aa7.34□□□□□ -1.23
SP140-213ENST00000543928 RPL37P61927 97 aaKnown RBP7.34□□□□□ -1.23
SP140-213ENST00000543928 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
SP140-213ENST00000543928 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
SP140-213ENST00000543928 C8orf87E5RJ46 101 aa7.32□□□□□ -1.24
SP140-213ENST00000543928 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
SP140-213ENST00000543928 IGKV3D-7A0A0C4DH55 119 aa7.31□□□□□ -1.24
SP140-213ENST00000543928 BPY2O14599 106 aa7.31□□□□□ -1.24
SP140-213ENST00000543928 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
SP140-213ENST00000543928 Q75L30 129 aa7.31□□□□□ -1.24
SP140-213ENST00000543928 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
SP140-213ENST00000543928 PRR15Q8IV56 129 aa7.29□□□□□ -1.24
SP140-213ENST00000543928 C20orf166-AS1Q96NR2 134 aa7.29□□□□□ -1.24
SP140-213ENST00000543928 A8MUU9 505 aa7.28□□□□□ -1.24
SP140-213ENST00000543928 K7EQZ3 153 aa7.27□□□□□ -1.25
SP140-213ENST00000543928 C8orf17Q9NRJ1 99 aa7.27□□□□□ -1.25
SP140-213ENST00000543928 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
SP140-213ENST00000543928 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
SP140-213ENST00000543928 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
SP140-213ENST00000543928 ACYP1P07311 99 aa7.24□□□□□ -1.25
SP140-213ENST00000543928 Q8N9L7 120 aa7.24□□□□□ -1.25
SP140-213ENST00000543928 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
SP140-213ENST00000543928 MUC2Q02817 5179 aa7.23□□□□□ -1.25
SP140-213ENST00000543928 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
SP140-213ENST00000543928 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
SP140-213ENST00000543928 CXCL6P80162 114 aa7.18□□□□□ -1.26
SP140-213ENST00000543928 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
SP140-213ENST00000543928 TMEM254Q8TBM7 123 aa7.18□□□□□ -1.26
SP140-213ENST00000543928 hDV103S1A0JD37 113 aa7.17□□□□□ -1.26
SP140-213ENST00000543928 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
SP140-213ENST00000543928 MRPL34Q9BQ48 92 aaKnown RBP7.16□□□□□ -1.26
SP140-213ENST00000543928 J3QR89 54 aa7.15□□□□□ -1.26
SP140-213ENST00000543928 CASC2Q6XLA1 102 aa7.14□□□□□ -1.27
SP140-213ENST00000543928 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
SP140-213ENST00000543928 ATP5EP2Q5VTU8 51 aa7.12□□□□□ -1.27
SP140-213ENST00000543928 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
SP140-213ENST00000543928 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
SP140-213ENST00000543928 NDUFS5O43920 106 aa7.11□□□□□ -1.27
SP140-213ENST00000543928 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
SP140-213ENST00000543928 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
SP140-213ENST00000543928 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
SP140-213ENST00000543928 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
SP140-213ENST00000543928 K7ERU9 68 aa7.02□□□□□ -1.29
SP140-213ENST00000543928 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
SP140-213ENST00000543928 KRTAP4-9Q9BYQ8 210 aa7.01□□□□□ -1.29
SP140-213ENST00000543928 SPINK7P58062 85 aa6.99□□□□□ -1.29
SP140-213ENST00000543928 Q5W150 140 aa6.99□□□□□ -1.29
SP140-213ENST00000543928 A0A087WVE0 104 aa6.98□□□□□ -1.29
SP140-213ENST00000543928 COX6B2Q6YFQ2 88 aa6.97□□□□□ -1.29
SP140-213ENST00000543928 HRES1P13985 223 aa6.96□□□□□ -1.3
SP140-213ENST00000543928 TP53AIP1Q9HCN2 124 aa6.96□□□□□ -1.3
SP140-213ENST00000543928 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
SP140-213ENST00000543928 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
SP140-213ENST00000543928 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
SP140-213ENST00000543928 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
SP140-213ENST00000543928 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
SP140-213ENST00000543928 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
SP140-213ENST00000543928 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
SP140-213ENST00000543928 FAM236DA0A1B0GTK5 79 aa6.89□□□□□ -1.31
SP140-213ENST00000543928 MT-ATP8P03928 68 aa6.89□□□□□ -1.31
SP140-213ENST00000543928 FAM236CP0DP71 79 aa6.89□□□□□ -1.31
SP140-213ENST00000543928 MT1HP80294 61 aa6.88□□□□□ -1.31
SP140-213ENST00000543928 UQCRQO14949 82 aa6.85□□□□□ -1.31
SP140-213ENST00000543928 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
SP140-213ENST00000543928 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
SP140-213ENST00000543928 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
SP140-213ENST00000543928 H0Y9P7 68 aa6.8□□□□□ -1.32
SP140-213ENST00000543928 SCGB1A1P11684 91 aa6.8□□□□□ -1.32
SP140-213ENST00000543928 M0R2T5 61 aa6.79□□□□□ -1.32
SP140-213ENST00000543928 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
SP140-213ENST00000543928 ATOX1O00244 68 aa6.77□□□□□ -1.33
SP140-213ENST00000543928 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.33
SP140-213ENST00000543928 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
SP140-213ENST00000543928 FAM236AA0A1B0GUQ0 79 aa6.75□□□□□ -1.33
SP140-213ENST00000543928 FAM236BA0A1B0GV22 79 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms