RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
TSFM-208ENST00000543727 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.89
TSFM-208ENST00000543727 A0A1B0GVX0 72 aa9.51□□□□□ -0.89
TSFM-208ENST00000543727 DSCR10P59022 87 aa9.51□□□□□ -0.89
TSFM-208ENST00000543727 NDUFB1O75438 58 aa9.5□□□□□ -0.89
TSFM-208ENST00000543727 IGHV6-1A0A0B4J1U7 121 aa9.48□□□□□ -0.89
TSFM-208ENST00000543727 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
TSFM-208ENST00000543727 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
TSFM-208ENST00000543727 NREPQ16612 68 aa9.47□□□□□ -0.89
TSFM-208ENST00000543727 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
TSFM-208ENST00000543727 A8MWP4 228 aa9.45□□□□□ -0.9
TSFM-208ENST00000543727 F8W1H4 67 aa9.42□□□□□ -0.9
TSFM-208ENST00000543727 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
TSFM-208ENST00000543727 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
TSFM-208ENST00000543727 IGKV3D-7A0A0C4DH55 119 aa9.37□□□□□ -0.91
TSFM-208ENST00000543727 PRR15Q8IV56 129 aa9.37□□□□□ -0.91
TSFM-208ENST00000543727 C8orf17Q9NRJ1 99 aa9.35□□□□□ -0.91
TSFM-208ENST00000543727 BPY2O14599 106 aa9.33□□□□□ -0.92
TSFM-208ENST00000543727 Q6ZVQ6 151 aa9.33□□□□□ -0.92
TSFM-208ENST00000543727 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
TSFM-208ENST00000543727 KRTAP19-2Q3LHN2 52 aa9.32□□□□□ -0.92
TSFM-208ENST00000543727 Q8N9P0 234 aaPredicted RBP9.31□□□□□ -0.92
TSFM-208ENST00000543727 UBL5Q9BZL1 73 aa9.31□□□□□ -0.92
TSFM-208ENST00000543727 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
TSFM-208ENST00000543727 ETDBQ3ZM63 59 aa9.28□□□□□ -0.92
TSFM-208ENST00000543727 MMP24-AS1A0A0U1RRL7 71 aa9.26□□□□□ -0.93
TSFM-208ENST00000543727 K7EQZ3 153 aa9.26□□□□□ -0.93
TSFM-208ENST00000543727 TMEM254Q8TBM7 123 aa9.26□□□□□ -0.93
TSFM-208ENST00000543727 LINC00846Q9NV44 126 aa9.26□□□□□ -0.93
TSFM-208ENST00000543727 ZCCHC13Q8WW36 166 aaKnown RBP9.25□□□□□ -0.93
TSFM-208ENST00000543727 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
TSFM-208ENST00000543727 MRPL34Q9BQ48 92 aaKnown RBP9.23□□□□□ -0.93
TSFM-208ENST00000543727 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
TSFM-208ENST00000543727 MT1HP80294 61 aa9.18□□□□□ -0.94
TSFM-208ENST00000543727 ACYP1P07311 99 aa9.17□□□□□ -0.94
TSFM-208ENST00000543727 CXCL6P80162 114 aa9.16□□□□□ -0.94
TSFM-208ENST00000543727 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
TSFM-208ENST00000543727 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
TSFM-208ENST00000543727 Q8N9L7 120 aa9.13□□□□□ -0.95
TSFM-208ENST00000543727 RBM12B-AS1Q9P1G2 102 aa9.12□□□□□ -0.95
TSFM-208ENST00000543727 NDUFS5O43920 106 aa9.1□□□□□ -0.95
TSFM-208ENST00000543727 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
TSFM-208ENST00000543727 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
TSFM-208ENST00000543727 HRES1P13985 223 aa9.09□□□□□ -0.95
TSFM-208ENST00000543727 SPINK7P58062 85 aa9.09□□□□□ -0.95
TSFM-208ENST00000543727 A0A1B0GV90 55 aa9.08□□□□□ -0.96
TSFM-208ENST00000543727 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
TSFM-208ENST00000543727 M0R2T5 61 aa9.05□□□□□ -0.96
TSFM-208ENST00000543727 FAM236DA0A1B0GTK5 79 aa9.04□□□□□ -0.96
TSFM-208ENST00000543727 FAM236CP0DP71 79 aa9.04□□□□□ -0.96
TSFM-208ENST00000543727 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
TSFM-208ENST00000543727 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
TSFM-208ENST00000543727 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
TSFM-208ENST00000543727 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
TSFM-208ENST00000543727 C7orf65Q6ZTY9 151 aa8.96□□□□□ -0.98
TSFM-208ENST00000543727 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
TSFM-208ENST00000543727 Q5W150 140 aa8.95□□□□□ -0.98
TSFM-208ENST00000543727 J3QR89 54 aa8.92□□□□□ -0.98
TSFM-208ENST00000543727 LINC00643Q86TS7 51 aa8.92□□□□□ -0.98
TSFM-208ENST00000543727 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.98
TSFM-208ENST00000543727 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
TSFM-208ENST00000543727 IGKV2-30P06310 120 aa8.89□□□□□ -0.99
TSFM-208ENST00000543727 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
TSFM-208ENST00000543727 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
TSFM-208ENST00000543727 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
TSFM-208ENST00000543727 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
TSFM-208ENST00000543727 UQCRQO14949 82 aa8.73□□□□□ -1.01
TSFM-208ENST00000543727 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
TSFM-208ENST00000543727 A0A087WVE0 104 aa8.71□□□□□ -1.02
TSFM-208ENST00000543727 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
TSFM-208ENST00000543727 ATOX1O00244 68 aa8.7□□□□□ -1.02
TSFM-208ENST00000543727 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
TSFM-208ENST00000543727 K7ERU9 68 aa8.68□□□□□ -1.02
TSFM-208ENST00000543727 CYP4F30PQ9H0H9 118 aa8.66□□□□□ -1.02
TSFM-208ENST00000543727 H0Y9P7 68 aa8.62□□□□□ -1.03
TSFM-208ENST00000543727 MT2AP02795 61 aa8.62□□□□□ -1.03
TSFM-208ENST00000543727 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
TSFM-208ENST00000543727 IMUPQ9GZP8 106 aa8.61□□□□□ -1.03
TSFM-208ENST00000543727 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
TSFM-208ENST00000543727 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
TSFM-208ENST00000543727 MP68P56378 58 aa8.55□□□□□ -1.04
TSFM-208ENST00000543727 MT1FP04733 61 aa8.54□□□□□ -1.04
TSFM-208ENST00000543727 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
TSFM-208ENST00000543727 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
TSFM-208ENST00000543727 S4R3F8 94 aa8.53□□□□□ -1.04
TSFM-208ENST00000543727 KRTAP9-6A0A140TA67 174 aa8.52□□□□□ -1.05
TSFM-208ENST00000543727 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
TSFM-208ENST00000543727 H3BPC8 53 aa8.51□□□□□ -1.05
TSFM-208ENST00000543727 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
TSFM-208ENST00000543727 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
TSFM-208ENST00000543727 MT-ATP8P03928 68 aa8.46□□□□□ -1.06
TSFM-208ENST00000543727 A8MUN3 132 aa8.45□□□□□ -1.06
TSFM-208ENST00000543727 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
TSFM-208ENST00000543727 LCA10Q71F78 164 aa8.44□□□□□ -1.06
TSFM-208ENST00000543727 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
TSFM-208ENST00000543727 KRTAP9-3Q9BYQ3 159 aa8.44□□□□□ -1.06
TSFM-208ENST00000543727 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.07
TSFM-208ENST00000543727 KLKP1Q107X0 134 aa8.38□□□□□ -1.07
TSFM-208ENST00000543727 FAM236AA0A1B0GUQ0 79 aa8.37□□□□□ -1.07
TSFM-208ENST00000543727 FAM236BA0A1B0GV22 79 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms