RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NREPQ16612 68 aa10.44□□□□□ -0.74
DDX55-207ENST00000540763 A0A1B0GVX0 72 aa10.43□□□□□ -0.74
DDX55-207ENST00000540763 LINC00313P59037 77 aa10.43□□□□□ -0.74
DDX55-207ENST00000540763 C8orf87E5RJ46 101 aa10.41□□□□□ -0.74
DDX55-207ENST00000540763 DSCR10P59022 87 aa10.41□□□□□ -0.74
DDX55-207ENST00000540763 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
DDX55-207ENST00000540763 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
DDX55-207ENST00000540763 PCOTHQ58A44 107 aa10.4□□□□□ -0.74
DDX55-207ENST00000540763 IGHV6-1A0A0B4J1U7 121 aa10.39□□□□□ -0.75
DDX55-207ENST00000540763 NDUFB1O75438 58 aa10.39□□□□□ -0.75
DDX55-207ENST00000540763 A8MUU9 505 aa10.38□□□□□ -0.75
DDX55-207ENST00000540763 A8MWP4 228 aa10.38□□□□□ -0.75
DDX55-207ENST00000540763 ETDBQ3ZM63 59 aa10.38□□□□□ -0.75
DDX55-207ENST00000540763 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
DDX55-207ENST00000540763 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
DDX55-207ENST00000540763 KRTAP4-1Q9BYQ7 146 aa10.34□□□□□ -0.75
DDX55-207ENST00000540763 ATP11AUNQ6ZP68 121 aa10.33□□□□□ -0.76
DDX55-207ENST00000540763 Q6ZVQ6 151 aa10.33□□□□□ -0.76
DDX55-207ENST00000540763 IGKV3D-7A0A0C4DH55 119 aa10.32□□□□□ -0.76
DDX55-207ENST00000540763 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
DDX55-207ENST00000540763 UBL5Q9BZL1 73 aa10.3□□□□□ -0.76
DDX55-207ENST00000540763 BPY2O14599 106 aa10.29□□□□□ -0.76
DDX55-207ENST00000540763 LINC00846Q9NV44 126 aa10.29□□□□□ -0.76
DDX55-207ENST00000540763 A0A1B0GV90 55 aa10.28□□□□□ -0.76
DDX55-207ENST00000540763 FAT4Q6V0I7 4981 aa10.27□□□□□ -0.77
DDX55-207ENST00000540763 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
DDX55-207ENST00000540763 KRTAP9-6A0A140TA67 174 aa10.24□□□□□ -0.77
DDX55-207ENST00000540763 K7EQZ3 153 aa10.23□□□□□ -0.77
DDX55-207ENST00000540763 Q8N9P0 234 aaPredicted RBP10.21□□□□□ -0.77
DDX55-207ENST00000540763 MMP24-AS1A0A0U1RRL7 71 aa10.2□□□□□ -0.78
DDX55-207ENST00000540763 ACYP1P07311 99 aa10.19□□□□□ -0.78
DDX55-207ENST00000540763 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
DDX55-207ENST00000540763 TMEM254Q8TBM7 123 aa10.17□□□□□ -0.78
DDX55-207ENST00000540763 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
DDX55-207ENST00000540763 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
DDX55-207ENST00000540763 CXCL6P80162 114 aa10.13□□□□□ -0.79
DDX55-207ENST00000540763 Q8N9L7 120 aa10.11□□□□□ -0.79
DDX55-207ENST00000540763 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
DDX55-207ENST00000540763 KRTAP19-2Q3LHN2 52 aa10.08□□□□□ -0.8
DDX55-207ENST00000540763 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
DDX55-207ENST00000540763 HCG22E2RYF7 251 aa10.03□□□□□ -0.8
DDX55-207ENST00000540763 ATP5EP2Q5VTU8 51 aa10.03□□□□□ -0.8
DDX55-207ENST00000540763 WFDC13Q8IUB5 93 aa10.03□□□□□ -0.8
DDX55-207ENST00000540763 LCE2CQ5TA81 110 aa10.02□□□□□ -0.81
DDX55-207ENST00000540763 NDUFS5O43920 106 aa9.99□□□□□ -0.81
DDX55-207ENST00000540763 J3QR89 54 aa9.98□□□□□ -0.81
DDX55-207ENST00000540763 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
DDX55-207ENST00000540763 COX6B2Q6YFQ2 88 aa9.95□□□□□ -0.82
DDX55-207ENST00000540763 LINC00643Q86TS7 51 aa9.94□□□□□ -0.82
DDX55-207ENST00000540763 HRES1P13985 223 aa9.92□□□□□ -0.82
DDX55-207ENST00000540763 SPINK7P58062 85 aa9.92□□□□□ -0.82
DDX55-207ENST00000540763 MPLKIPQ8TAP9 179 aa9.91□□□□□ -0.82
DDX55-207ENST00000540763 MT1HP80294 61 aa9.89□□□□□ -0.83
DDX55-207ENST00000540763 RBM12B-AS1Q9P1G2 102 aa9.88□□□□□ -0.83
DDX55-207ENST00000540763 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
DDX55-207ENST00000540763 Q5W150 140 aa9.85□□□□□ -0.83
DDX55-207ENST00000540763 CRCT1Q9UGL9 99 aa9.85□□□□□ -0.83
DDX55-207ENST00000540763 HIST1H4AP62805 103 aaKnown RBP9.83□□□□□ -0.84
DDX55-207ENST00000540763 C7orf65Q6ZTY9 151 aa9.8□□□□□ -0.84
DDX55-207ENST00000540763 FSIP2Q5CZC0 6907 aa9.8□□□□□ -0.84
DDX55-207ENST00000540763 FAM236DA0A1B0GTK5 79 aa9.79□□□□□ -0.84
DDX55-207ENST00000540763 FAM236CP0DP71 79 aa9.79□□□□□ -0.84
DDX55-207ENST00000540763 FLGP20930 4061 aaPredicted RBP9.78□□□□□ -0.84
DDX55-207ENST00000540763 K7ERU9 68 aa9.76□□□□□ -0.85
DDX55-207ENST00000540763 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
DDX55-207ENST00000540763 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
DDX55-207ENST00000540763 A0A087WVE0 104 aa9.72□□□□□ -0.85
DDX55-207ENST00000540763 M0R2T5 61 aa9.71□□□□□ -0.86
DDX55-207ENST00000540763 TRAV22A0A0B4J277 110 aa9.67□□□□□ -0.86
DDX55-207ENST00000540763 UQCRQO14949 82 aa9.65□□□□□ -0.86
DDX55-207ENST00000540763 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
DDX55-207ENST00000540763 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
DDX55-207ENST00000540763 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
DDX55-207ENST00000540763 LOC101927531A0A1B0GV80 90 aa9.59□□□□□ -0.87
DDX55-207ENST00000540763 ATOX1O00244 68 aa9.58□□□□□ -0.88
DDX55-207ENST00000540763 H1FX-AS1Q4G0G2 97 aa9.55□□□□□ -0.88
DDX55-207ENST00000540763 OCR1Q9BZK8 76 aa9.55□□□□□ -0.88
DDX55-207ENST00000540763 H0Y9P7 68 aa9.54□□□□□ -0.88
DDX55-207ENST00000540763 C4orf26Q17RF5 130 aa9.54□□□□□ -0.88
DDX55-207ENST00000540763 CYP4F30PQ9H0H9 118 aa9.54□□□□□ -0.88
DDX55-207ENST00000540763 MT-ATP8P03928 68 aa9.53□□□□□ -0.88
DDX55-207ENST00000540763 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
DDX55-207ENST00000540763 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
DDX55-207ENST00000540763 MP68P56378 58 aa9.45□□□□□ -0.9
DDX55-207ENST00000540763 C1orf64Q8NEQ6 169 aa9.44□□□□□ -0.9
DDX55-207ENST00000540763 H3BPC8 53 aa9.42□□□□□ -0.9
DDX55-207ENST00000540763 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
DDX55-207ENST00000540763 LINC00208Q96KT6 92 aa9.41□□□□□ -0.9
DDX55-207ENST00000540763 KRTAP3-1Q9BYR8 98 aa9.41□□□□□ -0.9
DDX55-207ENST00000540763 SMIM20Q8N5G0 67 aa9.39□□□□□ -0.91
DDX55-207ENST00000540763 FAM236AA0A1B0GUQ0 79 aa9.38□□□□□ -0.91
DDX55-207ENST00000540763 FAM236BA0A1B0GV22 79 aa9.38□□□□□ -0.91
DDX55-207ENST00000540763 TRAV7A0A075B6U4 112 aa9.31□□□□□ -0.92
DDX55-207ENST00000540763 MT2AP02795 61 aa9.31□□□□□ -0.92
DDX55-207ENST00000540763 S4R3F8 94 aa9.31□□□□□ -0.92
DDX55-207ENST00000540763 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
DDX55-207ENST00000540763 A8MUN3 132 aa9.26□□□□□ -0.93
DDX55-207ENST00000540763 MT1FP04733 61 aa9.23□□□□□ -0.93
DDX55-207ENST00000540763 LCA10Q71F78 164 aa9.23□□□□□ -0.93
DDX55-207ENST00000540763 KRTAP10-10P60014 251 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms