RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
CAPN1-228ENST00000534373 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
CAPN1-228ENST00000534373 C9JAW5 83 aa6.81□□□□□ -1.32
CAPN1-228ENST00000534373 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
CAPN1-228ENST00000534373 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
CAPN1-228ENST00000534373 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
CAPN1-228ENST00000534373 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
CAPN1-228ENST00000534373 IGHV6-1A0A0B4J1U7 121 aa6.78□□□□□ -1.32
CAPN1-228ENST00000534373 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
CAPN1-228ENST00000534373 MTURNQ8N3F0 131 aa6.78□□□□□ -1.32
CAPN1-228ENST00000534373 J3KT08 172 aa6.76□□□□□ -1.33
CAPN1-228ENST00000534373 COL5A1-AS1Q5SY13 56 aa6.76□□□□□ -1.33
CAPN1-228ENST00000534373 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
CAPN1-228ENST00000534373 JMJD7-PLA2G4BH0Y9G9 81 aa6.75□□□□□ -1.33
CAPN1-228ENST00000534373 KRTAP9-8Q9BYQ0 159 aa6.75□□□□□ -1.33
CAPN1-228ENST00000534373 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
CAPN1-228ENST00000534373 SPCS1Q9Y6A9 102 aa6.75□□□□□ -1.33
CAPN1-228ENST00000534373 MPLKIPQ8TAP9 179 aa6.74□□□□□ -1.33
CAPN1-228ENST00000534373 C14orf132Q9NPU4 83 aa6.74□□□□□ -1.33
CAPN1-228ENST00000534373 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
CAPN1-228ENST00000534373 A0A1B0GW54 56 aa6.73□□□□□ -1.33
CAPN1-228ENST00000534373 H3BT86 120 aa6.73□□□□□ -1.33
CAPN1-228ENST00000534373 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
CAPN1-228ENST00000534373 Q6ZQT0 140 aa6.73□□□□□ -1.33
CAPN1-228ENST00000534373 HRES1P13985 223 aa6.72□□□□□ -1.33
CAPN1-228ENST00000534373 LOC110117498A0A087WWA1 95 aa6.71□□□□□ -1.34
CAPN1-228ENST00000534373 NDUFB1O75438 58 aa6.7□□□□□ -1.34
CAPN1-228ENST00000534373 PDE6GP18545 87 aa6.69□□□□□ -1.34
CAPN1-228ENST00000534373 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
CAPN1-228ENST00000534373 ZCCHC13Q8WW36 166 aaKnown RBP6.67□□□□□ -1.34
CAPN1-228ENST00000534373 K7EP34 96 aa6.66□□□□□ -1.34
CAPN1-228ENST00000534373 A8MWP4 228 aa6.64□□□□□ -1.35
CAPN1-228ENST00000534373 SPINK7P58062 85 aa6.63□□□□□ -1.35
CAPN1-228ENST00000534373 MT2AP02795 61 aa6.62□□□□□ -1.35
CAPN1-228ENST00000534373 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
CAPN1-228ENST00000534373 C8orf17Q9NRJ1 99 aa6.62□□□□□ -1.35
CAPN1-228ENST00000534373 USH2AO75445 5202 aa6.61□□□□□ -1.35
CAPN1-228ENST00000534373 NREPQ16612 68 aa6.6□□□□□ -1.35
CAPN1-228ENST00000534373 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
CAPN1-228ENST00000534373 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
CAPN1-228ENST00000534373 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.35
CAPN1-228ENST00000534373 SSPOA2VEC9 5147 aa6.57□□□□□ -1.36
CAPN1-228ENST00000534373 Q6ZVQ6 151 aa6.57□□□□□ -1.36
CAPN1-228ENST00000534373 PRR15Q8IV56 129 aa6.57□□□□□ -1.36
CAPN1-228ENST00000534373 MT1FP04733 61 aa6.56□□□□□ -1.36
CAPN1-228ENST00000534373 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
CAPN1-228ENST00000534373 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
CAPN1-228ENST00000534373 TMEM254Q8TBM7 123 aa6.52□□□□□ -1.37
CAPN1-228ENST00000534373 WFDC13Q8IUB5 93 aa6.51□□□□□ -1.37
CAPN1-228ENST00000534373 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
CAPN1-228ENST00000534373 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
CAPN1-228ENST00000534373 F8W1H4 67 aa6.5□□□□□ -1.37
CAPN1-228ENST00000534373 BPY2O14599 106 aa6.5□□□□□ -1.37
CAPN1-228ENST00000534373 LCE2BO14633 110 aa6.5□□□□□ -1.37
CAPN1-228ENST00000534373 K7EQZ3 153 aa6.49□□□□□ -1.37
CAPN1-228ENST00000534373 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
CAPN1-228ENST00000534373 hDV103S1A0JD37 113 aa6.48□□□□□ -1.37
CAPN1-228ENST00000534373 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
CAPN1-228ENST00000534373 UBL5Q9BZL1 73 aa6.46□□□□□ -1.38
CAPN1-228ENST00000534373 LINC00846Q9NV44 126 aa6.46□□□□□ -1.38
CAPN1-228ENST00000534373 Q8N9L7 120 aa6.45□□□□□ -1.38
CAPN1-228ENST00000534373 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
CAPN1-228ENST00000534373 NDUFS5O43920 106 aa6.43□□□□□ -1.38
CAPN1-228ENST00000534373 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
CAPN1-228ENST00000534373 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
CAPN1-228ENST00000534373 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
CAPN1-228ENST00000534373 A0A1B0GV90 55 aa6.39□□□□□ -1.39
CAPN1-228ENST00000534373 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
CAPN1-228ENST00000534373 Q5W150 140 aa6.36□□□□□ -1.39
CAPN1-228ENST00000534373 CASC2Q6XLA1 102 aa6.36□□□□□ -1.39
CAPN1-228ENST00000534373 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
CAPN1-228ENST00000534373 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
CAPN1-228ENST00000534373 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
CAPN1-228ENST00000534373 CXCL6P80162 114 aa6.32□□□□□ -1.4
CAPN1-228ENST00000534373 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
CAPN1-228ENST00000534373 ACYP1P07311 99 aa6.3□□□□□ -1.4
CAPN1-228ENST00000534373 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
CAPN1-228ENST00000534373 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
CAPN1-228ENST00000534373 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
CAPN1-228ENST00000534373 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
CAPN1-228ENST00000534373 HIST1H4AP62805 103 aaKnown RBP6.21□□□□□ -1.42
CAPN1-228ENST00000534373 TP53AIP1Q9HCN2 124 aa6.2□□□□□ -1.42
CAPN1-228ENST00000534373 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
CAPN1-228ENST00000534373 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
CAPN1-228ENST00000534373 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
CAPN1-228ENST00000534373 J3QR89 54 aa6.16□□□□□ -1.42
CAPN1-228ENST00000534373 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
CAPN1-228ENST00000534373 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CAPN1-228ENST00000534373 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
CAPN1-228ENST00000534373 A0A087WVE0 104 aa6.14□□□□□ -1.43
CAPN1-228ENST00000534373 S4R3F8 94 aa6.14□□□□□ -1.43
CAPN1-228ENST00000534373 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
CAPN1-228ENST00000534373 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
CAPN1-228ENST00000534373 LCA10Q71F78 164 aa6.1□□□□□ -1.43
CAPN1-228ENST00000534373 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
CAPN1-228ENST00000534373 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
CAPN1-228ENST00000534373 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
CAPN1-228ENST00000534373 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
CAPN1-228ENST00000534373 UQCRQO14949 82 aa6.04□□□□□ -1.44
CAPN1-228ENST00000534373 H0Y9P7 68 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms